Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031127 Daucus carota HOM05D009745 ORTHO05D011350 4.9e-95 351.3 198 100.0
DCAR_026529 Daucus carota HOM05D009745 ORTHO05D011350 1.0e-31 141.0 200 41.0
Oeu012697.1 Olea europaea HOM05D009745 ORTHO05D011350 8.8e-28 127.9 142 44.4
SGA_v2.0_scaffold63G21711 Striga asiatica HOM05D009745 ORTHO05D011350 9.4e-22 107.8 141 44.7
Migut.E00187 Erythranthe guttata HOM05D009745 ORTHO05D011350 1.6e-21 107.1 137 40.1
Dinv15255 Davidia involucrata HOM05D009745 ORTHO05D011350 2.7e-21 106.3 111 47.7
DCAR_023403 Daucus carota HOM05D009745 ORTHO05D011350 8.0e-21 104.8 142 39.4
Oeu059922.1 Olea europaea HOM05D009745 ORTHO05D011350 1.4e-20 104.0 187 34.8
unitig_22.g6453 Utricularia gibba HOM05D009745 ORTHO05D011350 1.2e-19 100.9 137 38.0
unitig_23.g29657 Utricularia gibba HOM05D009745 ORTHO05D011350 1.2e-19 100.9 137 38.0
unitig_25.g30577 Utricularia gibba HOM05D009745 ORTHO05D011350 1.2e-19 100.9 137 38.0
Dinv24814 Davidia involucrata HOM05D009745 ORTHO05D011350 7.5e-19 98.2 110 43.6
MSTRG.2411 Avicennia marina HOM05D009745 ORTHO05D011350 4.8e-18 95.5 140 39.3
CSS0018735 Camellia sinensis var. sinensis HOM05D009745 ORTHO05D011350 4.1e-17 92.4 145 35.2
Rhsim12G0042100 Rhododendron simsii HOM05D009745 ORTHO05D011350 7.0e-17 91.7 147 34.7
Oeu038602.1 Olea europaea HOM05D009745 ORTHO05D011350 5.5e-14 82.0 141 33.3
Oeu038608.1 Olea europaea HOM05D009745 ORTHO05D011350 1.6e-13 80.5 141 32.6
Actinidia37407 Actinidia chinensis HOM05D009745 ORTHO05D011350 1.0e-12 77.8 108 37.0
MSTRG.2412 Avicennia marina HOM05D019021 ORTHO05D011350 6.8e-12 75.1 110 34.5
unitig_8.g2927 Utricularia gibba HOM05D019021 ORTHO05D011350 9.8e-11 71.2 111 34.2
THA.LOC104822159 Tarenaya hassleriana HOM05D008070 ORTHO05D001888 1.7e-10 70.5 145 33.8
Nitab4.5_0002255g0030 Nicotiana tabacum HOM05D009745 ORTHO05D011350 2.8e-10 69.7 111 30.6
Nitab4.5_0007682g0020 Nicotiana tabacum HOM05D009745 ORTHO05D011350 3.7e-10 69.3 112 29.5
SalBow2G3513 Salvia bowleyana HOM05D019021 ORTHO05D011350 8.3e-10 68.2 141 31.2
CAN.G447.11 Capsicum annuum HOM05D009745 ORTHO05D011350 1.1e-09 67.8 112 28.6
Oeu059919.1 Olea europaea HOM05D019021 ORTHO05D011350 1.4e-09 67.4 137 28.5
Thhalv10008931m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 3.1e-09 66.2 139 33.1
Migut.L01474 Erythranthe guttata HOM05D019021 ORTHO05D011350 4.1e-09 65.9 140 27.9
PGSC0003DMG400007676 Solanum tuberosum HOM05D009745 ORTHO05D011350 4.1e-09 65.9 112 27.7
Solyc05g005030.4 Solanum lycopersicum HOM05D009745 ORTHO05D011350 7.0e-09 65.1 112 27.7
Peaxi162Scf00515g00012 Petunia axillaris HOM05D009745 ORTHO05D011350 1.2e-08 64.3 108 30.6
QL03p058723 Quercus lobata HOM05D010056 ORTHO05D001888 1.2e-08 64.3 139 30.2
Sopen05g001040 Solanum pennellii HOM05D009745 ORTHO05D011350 1.2e-08 64.3 112 27.7
SGA_v2.0_scaffold572G52967 Striga asiatica HOM05D019021 ORTHO05D011350 1.2e-08 64.3 120 35.0
Carub.0001s2294 Capsella rubella HOM05D008070 ORTHO05D001888 2.0e-08 63.5 145 31.7
Haze_12224 Corylus avellana HOM05D008070 ORTHO05D001888 2.9e-07 59.7 141 27.7
Thhalv10019249m.g Eutrema salsugineum HOM05D008070 ORTHO05D001888 2.9e-07 59.7 148 27.0
Peaxi162Scf00623g00056 Petunia axillaris HOM05D016063 ORTHO05D017753 2.9e-07 59.7 146 30.8
Atru.chr11.2085 Acer truncatum HOM05D008070 ORTHO05D001888 5.0e-07 58.9 137 27.7
Atru.chr11.2086 Acer truncatum HOM05D008070 ORTHO05D001888 5.0e-07 58.9 137 27.7
Aa31LG1G9980 Aethionema arabicum HOM05D008182 ORTHO05D001888 8.6e-07 58.2 118 31.4
ClCG08G017790 Citrullus lanatus HOM05D008070 ORTHO05D001888 8.6e-07 58.2 141 25.5
Manes.13G026900 Manihot esculenta HOM05D008070 ORTHO05D001888 8.6e-07 58.2 143 27.3
Cfa009190 Carpinus fangiana HOM05D008070 ORTHO05D001888 1.1e-06 57.8 141 28.4
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.1e-06 57.8 142 25.4
TWI36G0098 Tripterygium wilfordii HOM05D008070 ORTHO05D001888 1.5e-06 57.4 140 32.1
CsaV3_2G024840 Cucumis sativus L. HOM05D008070 ORTHO05D001888 1.9e-06 57.0 138 26.8
AL1G11880 Arabidopsis lyrata HOM05D008182 ORTHO05D001888 2.5e-06 56.6 135 31.1
AT1G02550 Arabidopsis thaliana HOM05D008182 ORTHO05D001888 2.5e-06 56.6 135 31.1
BraA02t06717Z Brassica rapa HOM05D008070 ORTHO05D001888 2.5e-06 56.6 138 29.7
BcaC03g15202 Brassica carinata HOM05D008070 ORTHO05D001888 4.3e-06 55.8 138 29.7
C02p27870 Brassica napus HOM05D008070 ORTHO05D001888 4.3e-06 55.8 138 29.7
BolC2t08833H Brassica oleracea HOM05D008070 ORTHO05D001888 4.3e-06 55.8 138 29.7
BcaB03g11935 Brassica carinata HOM05D008070 ORTHO05D001888 5.6e-06 55.5 140 31.4
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 9.5e-06 54.7 149 25.5
Sp5g25690 Schrenkiella parvula HOM05D008070 ORTHO05D001888 9.5e-06 54.7 138 27.5


User provided reference genes

Program Settings