Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 3.9e-105 384.8 195 100.0
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 4.3e-59 231.9 203 65.0
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 9.8e-56 220.7 209 61.2
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 2.2e-55 219.5 205 62.4
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 1.5e-51 206.8 222 57.2
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 5.6e-51 204.9 204 60.3
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.2e-50 203.8 204 58.3
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 2.8e-50 202.6 208 57.2
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 6.8e-49 198.0 205 57.6
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 2.0e-48 196.4 203 57.1
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 9.9e-48 194.1 175 65.7
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.3e-47 193.7 209 56.5
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 1.3e-47 193.7 201 58.2
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.7e-47 193.4 210 56.7
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 2.2e-47 193.0 203 56.7
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.9e-47 192.6 228 53.5
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.4e-46 190.3 209 56.0
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 3.2e-46 189.1 210 54.8
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 7.1e-46 188.0 201 55.7
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 9.2e-46 187.6 256 47.7
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 3.5e-45 185.7 201 55.2
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 6.0e-45 184.9 204 56.9
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 6.0e-45 184.9 209 53.6
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 6.0e-45 184.9 201 57.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 7.8e-45 184.5 213 53.5
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.0e-44 184.1 199 56.8
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 1.7e-44 183.3 203 55.7
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 3.0e-44 182.6 207 55.1
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 3.0e-44 182.6 200 55.5
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 3.9e-44 182.2 208 51.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 3.9e-44 182.2 208 51.9
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.1e-43 180.6 200 56.0
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.9e-43 179.9 212 53.8
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 2.5e-43 179.5 203 53.2
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 3.3e-43 179.1 212 54.2
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 5.6e-43 178.3 205 53.7
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 5.6e-43 178.3 200 55.5
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 9.5e-43 177.6 207 52.2
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 9.5e-43 177.6 200 55.5
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 1.2e-42 177.2 212 53.3
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 1.6e-42 176.8 200 53.0
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 3.6e-42 175.6 206 53.4
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 6.2e-42 174.9 199 54.8
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 6.2e-42 174.9 213 51.2
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 1.4e-41 173.7 219 52.1
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 1.4e-41 173.7 200 54.0
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.8e-41 173.3 204 54.4
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 3.1e-41 172.6 211 52.1
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 6.8e-41 171.4 203 49.3
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 4.4e-40 168.7 212 51.4
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.3e-39 167.2 211 48.8
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.2e-39 166.4 211 49.3
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 2.2e-39 166.4 213 50.2
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 6.4e-39 164.9 228 47.8
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 6.4e-39 164.9 203 54.7
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 8.4e-39 164.5 211 49.3
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 8.4e-39 164.5 209 49.3
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.4e-38 163.7 209 50.7
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.4e-38 163.7 207 50.2
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.9e-38 163.3 237 46.8
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.4e-38 162.9 212 48.1
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 2.4e-38 162.9 199 53.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 4.1e-38 162.2 209 48.8
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 7.1e-38 161.4 204 48.5
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.6e-37 160.2 151 59.6
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.6e-37 160.2 154 58.4
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 4.6e-37 158.7 209 47.8
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 4.6e-37 158.7 209 47.8
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 4.6e-37 158.7 209 51.2
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 6.0e-37 158.3 214 47.7
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 1.0e-36 157.5 212 49.5
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 1.3e-36 157.1 210 48.6
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 2.3e-36 156.4 211 50.2
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.1e-35 154.1 171 53.8
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 1.9e-35 153.3 222 49.1
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 2.5e-35 152.9 209 49.8
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 2.5e-35 152.9 210 49.0
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 3.3e-35 152.5 209 48.3
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 2.1e-34 149.8 217 45.6
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 3.6e-34 149.1 201 48.3
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 4.7e-34 148.7 112 71.4
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 4.7e-34 148.7 213 48.4
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 6.2e-34 148.3 201 46.3
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 8.1e-34 147.9 210 50.0
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 4.0e-33 145.6 201 47.8
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 6.9e-33 144.8 208 45.7
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 6.9e-33 144.8 197 46.7
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 9.0e-33 144.4 129 62.8
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 5.8e-32 141.7 197 46.7
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 7.6e-32 141.4 211 45.5
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.7e-31 140.2 164 53.7
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.9e-31 139.4 211 45.0
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 6.4e-31 138.3 211 44.5
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 2.7e-29 132.9 152 52.6
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 2.7e-29 132.9 196 46.4
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.6e-28 128.3 119 58.8
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 1.1e-27 127.5 201 41.3
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 5.3e-25 118.6 202 39.6
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 5.3e-25 118.6 112 57.1
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 3.7e-18 95.9 83 60.2
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 3.2e-14 82.8 125 44.8
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 4.6e-13 79.0 88 55.7
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 7.4e-11 71.6 91 52.7


User provided reference genes

Program Settings