Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 2.8e-216 755.4 495 100.0
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.2e-139 500.7 348 73.3
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 6.4e-136 488.4 348 72.4
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 5.4e-135 485.3 312 79.5
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 7.8e-134 481.5 345 73.0
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 2.3e-133 479.9 314 76.8
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 8.7e-133 478.0 402 64.7
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 1.6e-131 473.8 339 73.7
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 1.6e-131 473.8 342 72.8
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 4.8e-131 472.2 310 77.1
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 8.1e-131 471.5 340 71.5
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 8.1e-131 471.5 318 76.1
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 1.1e-130 471.1 313 76.0
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.1e-130 471.1 312 76.3
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.1e-130 471.1 339 73.7
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 1.8e-130 470.3 309 75.7
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 2.4e-130 469.9 329 71.7
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 3.1e-130 469.5 338 73.1
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 5.3e-130 468.8 314 75.2
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 1.2e-129 467.6 315 74.6
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.5e-129 467.2 308 76.6
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 2.0e-129 466.8 329 72.0
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 2.6e-129 466.5 347 69.7
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 3.4e-129 466.1 348 70.7
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 5.8e-129 465.3 338 73.1
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 5.8e-129 465.3 315 74.3
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 7.6e-129 464.9 345 71.3
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 7.6e-129 464.9 337 72.1
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 9.9e-129 464.5 332 71.7
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.3e-128 464.2 332 71.7
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 1.7e-128 463.8 349 71.1
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 2.9e-128 463.0 332 71.4
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 1.1e-127 461.1 348 70.4
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 2.4e-127 459.9 431 60.3
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 4.2e-127 459.1 390 62.3
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 1.3e-125 454.1 401 59.9
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 1.3e-125 454.1 401 59.9
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 2.3e-125 453.4 335 71.0
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 8.7e-125 451.4 306 74.8
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 1.9e-124 450.3 308 74.4
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 1.9e-124 450.3 306 74.5
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.9e-124 450.3 350 68.3
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 3.3e-124 449.5 345 64.9
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 3.3e-124 449.5 415 64.1
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 3.3e-124 449.5 310 73.9
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 4.3e-124 449.1 312 71.5
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 5.6e-124 448.7 312 73.1
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 7.4e-124 448.4 312 71.5
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 1.3e-123 447.6 311 71.4
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 1.6e-123 447.2 348 65.5
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 3.7e-123 446.0 405 59.5
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 4.8e-123 445.7 315 71.7
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 6.2e-123 445.3 396 64.1
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 6.2e-123 445.3 315 71.7
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 6.2e-123 445.3 315 71.7
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.1e-122 444.5 336 68.2
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.8e-122 443.7 312 71.2
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 4.0e-122 442.6 315 71.1
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 4.0e-122 442.6 353 66.0
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 1.5e-121 440.7 332 68.7
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 2.0e-121 440.3 311 72.3
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 2.0e-121 440.3 315 69.5
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 2.0e-121 440.3 317 70.7
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 4.5e-121 439.1 309 72.2
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 4.5e-121 439.1 312 69.9
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 7.6e-121 438.3 342 67.3
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 1.7e-120 437.2 309 70.6
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 1.7e-120 437.2 313 71.2
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 2.2e-120 436.8 315 70.2
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 2.9e-120 436.4 314 70.7
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 4.9e-120 435.6 316 69.9
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 6.4e-120 435.3 317 70.0
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 1.1e-119 434.5 316 69.9
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 1.6e-118 430.6 311 69.1
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 4.6e-118 429.1 324 66.7
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 3.0e-117 426.4 330 66.4
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 6.7e-117 425.2 309 71.2
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 3.7e-115 419.5 350 63.4
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.1e-114 417.9 316 68.7
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.1e-114 417.9 345 67.0
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.8e-114 417.2 309 67.3
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 5.3e-114 415.6 309 67.3
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.2e-111 406.4 342 63.7
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 1.2e-110 404.4 385 59.0
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 5.1e-109 399.1 415 57.6
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 7.4e-108 395.2 316 65.8
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.4e-103 380.9 256 75.8
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 2.5e-100 370.2 319 61.1
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 9.7e-100 368.2 639 39.4
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 2.2e-99 367.1 387 54.3
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 2.8e-99 366.7 263 70.7
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 1.3e-96 357.8 305 60.0
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 6.5e-96 355.5 276 66.3
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 6.5e-88 328.9 246 67.1
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 8.8e-85 318.5 288 56.6
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 3.1e-82 310.1 252 63.5
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 1.2e-81 308.1 221 70.6
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 1.8e-69 267.7 188 73.9
Ah.09g232390 Amaranthus hybridus HOM05D006577 ORTHO05D008428 7.7e-65 252.3 308 49.4
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 5.7e-60 236.1 184 66.8
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 8.0e-54 215.7 139 70.5
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 2.0e-49 201.1 152 64.5
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 8.3e-43 179.1 272 39.3
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 4.1e-42 176.8 175 55.4
Os06g0708900 Oryza sativa ssp. japonica HOM05D006577 ORTHO05D008428 8.4e-27 125.9 75 81.3
Zm00001eb395460 Zea mays HOM05D006577 ORTHO05D008428 8.4e-27 125.9 76 80.3
CARHR123800 Cardamine hirsuta HOM05D006577 ORTHO05D008428 1.9e-26 124.8 69 82.6
Zm00001eb339160 Zea mays HOM05D006577 ORTHO05D008428 2.4e-26 124.4 75 81.3
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 1.6e-25 121.7 193 44.6
VMungo0251G3731 Vigna mungo HOM05D006577 ORTHO05D008428 2.3e-24 117.9 88 69.3
Nitab4.5_0000030g0480 Nicotiana tabacum HOM05D006577 ORTHO05D008428 9.0e-21 105.9 86 68.6
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 4.4e-20 103.6 115 52.2
FAN21G2282 Fragaria x ananassa HOM05D006577 ORTHO05D011051 5.8e-20 103.2 61 82.0
FAN21G2462 Fragaria x ananassa HOM05D006577 ORTHO05D011051 2.9e-19 100.9 61 80.3
AUR62042461 Chenopodium quinoa HOM05D006577 ORTHO05D008428 3.9e-16 90.5 67 70.1
FAN21G2626 Fragaria x ananassa HOM05D006577 ORTHO05D011051 3.9e-16 90.5 61 77.0
Lj3A8T28 Lonicera japonica HOM05D006577 ORTHO05D008428 5.1e-16 90.1 51 82.4
Lj3C28T3 Lonicera japonica HOM05D006577 ORTHO05D008428 5.1e-16 90.1 51 82.4
TPR.G13376 Trifolium pratense HOM05D006577 ORTHO05D008428 4.3e-15 87.0 67 70.1
Cre06.g280700 Chlamydomonas reinhardtii HOM05D006577 ORTHO05D008428 1.8e-13 81.6 124 38.7
BcaB08g35318 Brassica carinata HOM05D006577 ORTHO05D008428 4.0e-13 80.5 60 66.7
FvH4_3g03932 Fragaria vesca HOM05D006577 ORTHO05D008428 3.4e-12 77.4 39 92.3


User provided reference genes

Program Settings