Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 7.7e-46 186.8 95 100.0
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 5.5e-36 154.1 95 75.8
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 4.7e-35 151.0 95 75.8
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 1.8e-34 149.1 95 74.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.8e-34 149.1 95 74.7
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 3.0e-34 148.3 95 77.9
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 3.0e-34 148.3 95 68.4
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 8.8e-34 146.7 95 74.7
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.5e-33 146.0 95 73.7
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.0e-33 145.6 93 73.1
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 2.0e-33 145.6 95 72.6
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 3.3e-33 144.8 95 70.5
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 3.3e-33 144.8 95 73.7
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 4.4e-33 144.4 95 73.7
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 5.7e-33 144.1 95 70.5
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 7.4e-33 143.7 95 76.8
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 7.4e-33 143.7 95 71.6
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 7.4e-33 143.7 95 72.6
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 9.7e-33 143.3 95 72.6
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 1.3e-32 142.9 94 71.3
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.3e-32 142.9 94 75.5
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 2.2e-32 142.1 95 69.5
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 2.8e-32 141.7 95 74.7
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 2.8e-32 141.7 95 73.7
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 2.8e-32 141.7 94 74.5
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 2.8e-32 141.7 94 74.5
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 2.8e-32 141.7 95 72.6
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 2.8e-32 141.7 95 73.7
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 3.7e-32 141.4 94 75.5
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.7e-32 141.4 95 71.6
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 3.7e-32 141.4 95 70.5
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 4.8e-32 141.0 94 73.4
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 4.8e-32 141.0 94 73.4
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 6.3e-32 140.6 95 73.7
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 6.3e-32 140.6 95 73.7
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 6.3e-32 140.6 96 69.8
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 6.3e-32 140.6 95 69.5
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 6.3e-32 140.6 95 68.4
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.4e-31 139.4 97 66.0
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.8e-31 139.0 95 69.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.8e-31 139.0 95 64.2
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.4e-31 138.7 95 71.6
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 2.4e-31 138.7 95 64.2
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 3.1e-31 138.3 94 73.4
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 3.1e-31 138.3 83 80.7
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 4.1e-31 137.9 95 67.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 4.1e-31 137.9 95 68.4
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 5.3e-31 137.5 96 66.7
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 5.3e-31 137.5 96 66.7
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.0e-31 137.1 94 67.0
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 7.0e-31 137.1 92 70.7
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 9.1e-31 136.7 95 66.3
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 9.1e-31 136.7 92 69.6
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 9.1e-31 136.7 95 67.4
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 9.1e-31 136.7 95 68.4
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.2e-30 136.3 95 66.3
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.6e-30 136.0 95 68.4
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 2.6e-30 135.2 95 67.4
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 2.6e-30 135.2 94 64.9
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 3.5e-30 134.8 95 65.3
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 7.7e-30 133.7 92 68.5
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 7.7e-30 133.7 93 68.8
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.0e-29 133.3 95 67.4
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 1.0e-29 133.3 94 70.2
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.3e-29 132.9 95 65.3
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.3e-29 132.9 94 67.0
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 1.7e-29 132.5 95 65.3
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 2.2e-29 132.1 95 65.3
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 2.2e-29 132.1 95 65.3
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.9e-29 131.7 95 65.3
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.9e-29 131.7 93 66.7
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 3.8e-29 131.3 94 66.0
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 3.8e-29 131.3 94 64.9
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 6.5e-29 130.6 95 66.3
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 6.5e-29 130.6 85 71.8
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.1e-28 129.8 95 64.2
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.5e-28 129.4 91 68.1
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.5e-28 129.4 95 65.3
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.5e-28 129.4 95 65.3
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.5e-28 129.4 95 65.3
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 2.5e-28 128.6 93 64.5
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 3.2e-28 128.3 88 69.3
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 7.2e-28 127.1 91 65.9
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.6e-27 125.9 94 67.0
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 3.6e-27 124.8 93 64.5
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 8.0e-27 123.6 95 56.8
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.8e-26 122.5 82 75.6
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 3.3e-25 118.2 74 78.4
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 7.5e-25 117.1 83 69.9
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 6.3e-24 114.0 81 66.7
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 6.3e-24 114.0 88 53.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 8.2e-24 113.6 81 65.4
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.1e-23 113.2 81 63.0
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 7.7e-22 107.1 82 57.3
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 5.0e-21 104.4 87 60.9
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.9e-20 102.4 95 56.8
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 1.9e-20 102.4 75 61.3
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.6e-19 99.4 81 55.6
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 2.7e-19 98.6 70 67.1
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 4.7e-19 97.8 83 54.2
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-18 95.9 90 51.1
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 5.2e-18 94.4 59 74.6
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.1e-12 76.6 51 64.7
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 6.3e-08 60.8 38 65.8
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.1e-07 58.5 30 80.0
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 2.7e-06 55.5 46 60.9
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 3.5e-06 55.1 54 51.9


User provided reference genes

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