Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 3.4e-50 201.4 106 100.0
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 3.5e-31 138.3 91 74.7
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 1.7e-30 136.0 95 75.8
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 5.0e-30 134.4 95 69.5
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 1.9e-29 132.5 92 70.7
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.9e-29 132.5 92 71.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.9e-29 132.5 90 71.1
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 4.3e-29 131.3 92 71.7
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 4.3e-29 131.3 92 72.8
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 5.6e-29 131.0 95 70.5
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 7.3e-29 130.6 90 71.1
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 7.3e-29 130.6 92 70.7
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 9.5e-29 130.2 88 69.3
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 1.2e-28 129.8 87 72.4
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.2e-28 129.8 91 70.3
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 6.2e-28 127.5 92 72.8
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 6.2e-28 127.5 90 68.9
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 8.0e-28 127.1 92 69.6
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 8.0e-28 127.1 78 74.4
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 8.0e-28 127.1 92 71.7
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.0e-27 126.7 88 68.2
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.4e-27 126.3 92 70.7
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 1.4e-27 126.3 102 60.8
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.8e-27 125.9 79 75.9
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 1.8e-27 125.9 88 70.5
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.3e-27 125.6 82 74.4
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 3.1e-27 125.2 92 68.5
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 4.0e-27 124.8 79 74.7
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 6.8e-27 124.0 85 68.2
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 6.8e-27 124.0 92 65.2
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 6.8e-27 124.0 85 70.6
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 8.9e-27 123.6 93 69.9
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 8.9e-27 123.6 87 72.4
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 8.9e-27 123.6 79 74.7
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 8.9e-27 123.6 95 60.0
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 8.9e-27 123.6 91 64.8
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 1.2e-26 123.2 92 70.7
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.5e-26 122.9 91 65.9
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.5e-26 122.9 91 65.9
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 2.0e-26 122.5 91 63.7
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.0e-26 122.5 88 68.2
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.0e-26 122.5 87 65.5
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 2.6e-26 122.1 92 66.3
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 2.6e-26 122.1 86 69.8
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 2.6e-26 122.1 86 69.8
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 2.6e-26 122.1 99 65.7
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 3.4e-26 121.7 88 65.9
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 3.4e-26 121.7 104 61.5
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 3.4e-26 121.7 79 72.2
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 3.4e-26 121.7 75 76.0
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 4.4e-26 121.3 93 69.9
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 4.4e-26 121.3 75 74.7
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.4e-26 121.3 88 68.2
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 5.8e-26 120.9 86 69.8
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 5.8e-26 120.9 82 73.2
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 5.8e-26 120.9 79 68.4
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 7.5e-26 120.6 86 65.1
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 9.8e-26 120.2 87 69.0
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 1.3e-25 119.8 95 68.4
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.3e-25 119.8 75 77.3
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.3e-25 119.8 76 71.1
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.3e-25 119.8 86 65.1
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 1.7e-25 119.4 81 71.6
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 1.7e-25 119.4 79 74.7
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 1.7e-25 119.4 87 64.4
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 2.2e-25 119.0 92 60.9
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 2.9e-25 118.6 79 73.4
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.9e-25 118.6 94 66.0
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.9e-25 118.6 94 66.0
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 2.9e-25 118.6 91 65.9
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 2.9e-25 118.6 75 80.0
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 3.7e-25 118.2 92 63.0
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 3.7e-25 118.2 85 67.1
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 4.9e-25 117.9 95 60.0
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 6.4e-25 117.5 93 61.3
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 6.4e-25 117.5 92 68.5
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 8.3e-25 117.1 80 70.0
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 8.3e-25 117.1 80 70.0
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.1e-24 116.7 75 74.7
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.1e-24 116.7 75 74.7
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.1e-24 116.7 75 74.7
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 1.4e-24 116.3 96 62.5
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 1.4e-24 116.3 94 64.9
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.9e-24 115.9 76 76.3
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.4e-24 115.5 86 67.4
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 2.4e-24 115.5 83 67.5
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 3.2e-24 115.2 92 57.6
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 4.1e-24 114.8 102 62.7
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 4.1e-24 114.8 89 65.2
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 5.4e-24 114.4 75 74.7
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 2.7e-23 112.1 92 62.0
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.7e-23 112.1 95 57.9
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 6.0e-23 110.9 91 59.3
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.7e-22 109.4 77 68.8
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.3e-22 109.0 79 69.6
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.3e-22 109.0 79 69.6
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.1e-21 106.7 79 67.1
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.1e-21 106.7 74 67.6
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.9e-21 105.9 86 60.5
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.1e-20 102.4 82 61.0
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 2.1e-20 102.4 76 60.5
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.8e-20 102.1 82 59.8
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.1e-16 88.2 60 71.7
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 6.0e-15 84.3 82 47.6
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 1.0e-14 83.6 86 46.5
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 5.1e-14 81.3 88 48.9
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.5e-13 79.7 94 43.6
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 3.3e-13 78.6 52 73.1
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.2e-12 76.6 82 45.1
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 2.8e-12 75.5 67 53.7
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 4.7e-12 74.7 59 59.3
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 3.1e-11 72.0 82 41.5
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 2.6e-10 68.9 93 46.2
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.1e-08 63.5 50 58.0
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.6e-07 59.7 54 51.9
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 4.6e-07 58.2 57 52.6
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 1.7e-06 56.2 34 73.5


User provided reference genes

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