Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030788 Daucus carota HOM05D005505 ORTHO05D006974 2.6e-297 1024.6 511 100.0
RcHm_v2.0_Chr7g0196051 Rosa chinensis HOM05D005505 ORTHO05D006974 4.5e-209 731.5 512 69.7
vmacro00503 Vaccinium macrocarpon HOM05D005505 ORTHO05D006974 5.9e-209 731.1 512 69.9
Actinidia35954 Actinidia chinensis HOM05D005505 ORTHO05D006974 8.5e-208 727.2 514 69.6
FAN18G0472 Fragaria x ananassa HOM05D005505 ORTHO05D006974 8.5e-208 727.2 512 68.9
Prupe.5G110900 Prunus persica HOM05D005505 ORTHO05D006974 7.2e-207 724.2 515 69.5
FAN13G1424 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.6e-206 723.0 512 68.6
Ciclev10004754m.g Citrus clementina HOM05D005505 ORTHO05D006974 2.7e-206 722.2 509 68.6
SalBow2G0189 Salvia bowleyana HOM05D005505 ORTHO05D006974 3.9e-205 718.4 501 70.1
FvH4_5g03680 Fragaria vesca HOM05D005505 ORTHO05D006974 6.7e-205 717.6 512 68.6
FAN13G2718 Fragaria x ananassa HOM05D005505 ORTHO05D006974 4.4e-204 714.9 520 67.7
Atru.chr4.1761 Acer truncatum HOM05D005505 ORTHO05D006974 1.3e-203 713.4 509 68.4
MD06G1096300 Malus domestica HOM05D005505 ORTHO05D006974 1.7e-203 713.0 498 71.3
Potri.001G051200 Populus trichocarpa HOM05D005505 ORTHO05D006974 1.1e-202 710.3 514 68.5
CiPaw.02G067600 Carya illinoinensis HOM05D005505 ORTHO05D006974 9.1e-202 707.2 512 68.2
MELO3C016329.2 Cucumis melo HOM05D005505 ORTHO05D006974 2.0e-201 706.1 512 68.9
ECA233G0503 Erigeron canadensis HOM05D005505 ORTHO05D006974 2.6e-201 705.7 514 68.3
HanXRQChr10g0278391 Helianthus annuus HOM05D005505 ORTHO05D006974 3.4e-201 705.3 514 68.5
QL09p050425 Quercus lobata HOM05D005505 ORTHO05D006974 2.9e-200 702.2 508 67.9
TAR636G3130 Trochodendron aralioides HOM05D005505 ORTHO05D006974 3.8e-200 701.8 515 68.9
CsaV3_4G006210 Cucumis sativus L. HOM05D005505 ORTHO05D006974 5.0e-200 701.4 512 68.4
TWI53G0062 Tripterygium wilfordii HOM05D005505 ORTHO05D006974 1.1e-199 700.3 510 67.6
Cc03_g07370 Coffea canephora HOM05D005505 ORTHO05D006974 1.4e-199 699.9 512 66.8
Sed0009691 Sechium edule HOM05D005505 ORTHO05D006974 2.5e-199 699.1 512 68.6
Rhsim09G0051500 Rhododendron simsii HOM05D005505 ORTHO05D006974 4.2e-199 698.4 574 63.1
Manes.03G149700 Manihot esculenta HOM05D005505 ORTHO05D006974 1.2e-198 696.8 497 69.0
MSTRG.9830 Avicennia marina HOM05D005505 ORTHO05D006974 1.0e-197 693.7 512 67.4
CANSAT21G2364 Cannabis sativa HOM05D005505 ORTHO05D006974 1.4e-197 693.3 513 67.8
Eucgr.H00086 Eucalyptus grandis HOM05D005505 ORTHO05D006974 3.0e-197 692.2 513 66.7
Thecc.04G209900 Theobroma cacao HOM05D005505 ORTHO05D006974 5.2e-197 691.4 512 68.0
arahy.Tifrunner.gnm1.ann1.QX4MR3 Arachis hypogaea HOM05D005505 ORTHO05D006974 1.5e-196 689.9 510 66.9
COL.COLO4_20306 Corchorus olitorius HOM05D005505 ORTHO05D006974 2.6e-196 689.1 512 68.0
arahy.Tifrunner.gnm1.ann1.ZRDJ5X Arachis hypogaea HOM05D005505 ORTHO05D006974 4.4e-196 688.3 510 66.7
arahy.Tifrunner.gnm1.ann1.H9DAM7 Arachis hypogaea HOM05D005505 ORTHO05D006974 1.3e-195 686.8 510 66.3
ClCG07G007730 Citrullus lanatus HOM05D005505 ORTHO05D006974 1.3e-195 686.8 535 65.6
Sopen09g034490 Solanum pennellii HOM05D005505 ORTHO05D006974 1.3e-195 686.8 515 67.2
FAN08G1440 Fragaria x ananassa HOM05D005505 ORTHO05D006974 2.2e-195 686.0 514 65.8
Solyc09g091570.2 Solanum lycopersicum HOM05D005505 ORTHO05D006974 3.7e-195 685.3 515 67.0
Lalb_Chr19g0126031 Lupinus albus HOM05D005505 ORTHO05D006974 6.3e-195 684.5 510 66.7
TPR.G26848 Trifolium pratense HOM05D005505 ORTHO05D006974 1.2e-193 680.2 496 67.5
Migut.G00632 Erythranthe guttata HOM05D005505 ORTHO05D006974 5.9e-193 677.9 514 66.7
Lsat_1_v5_gn_2_43080 Lactuca sativa HOM05D005505 ORTHO05D006974 7.7e-193 677.6 509 67.2
Sabra01G0035800 Salix brachista HOM05D005505 ORTHO05D006974 1.7e-192 676.4 594 58.8
SGA_v2.0_scaffold380G50374 Striga asiatica HOM05D005505 ORTHO05D006974 2.2e-192 676.0 512 65.8
Lj1g0020537 Lotus japonicus HOM05D005505 ORTHO05D006974 3.8e-192 675.2 510 65.1
Phvul.008G135500 Phaseolus vulgaris HOM05D005505 ORTHO05D006974 5.0e-192 674.9 510 65.5
Lalb_Chr03g0041191 Lupinus albus HOM05D005505 ORTHO05D006974 8.5e-192 674.1 510 65.7
Nitab4.5_0000306g0020 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.1e-191 673.7 513 66.1
FAN04G0744 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.5e-191 673.3 512 65.4
FAN04G1715 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.5e-191 673.3 512 65.4
Glyma.08G345200 Glycine max HOM05D005505 ORTHO05D006974 1.5e-191 673.3 510 65.1
Gorai.006G220300 Gossypium raimondii HOM05D005505 ORTHO05D006974 3.2e-191 672.2 465 70.3
THA.LOC104821613 Tarenaya hassleriana HOM05D005505 ORTHO05D006974 7.2e-191 671.0 469 69.7
Gohir.A09G202800 Gossypium hirsutum HOM05D005505 ORTHO05D006974 2.1e-190 669.5 512 65.2
PGR142G3770 Punica granatum HOM05D005505 ORTHO05D006974 2.1e-190 669.5 513 65.7
CAN.G500.70 Capsicum annuum HOM05D005505 ORTHO05D006974 3.6e-190 668.7 499 66.9
Lj3A577G5 Lonicera japonica HOM05D005505 ORTHO05D006974 3.6e-190 668.7 549 62.5
Duzib212G0911 Durio zibethinus HOM05D005505 ORTHO05D006974 1.0e-189 667.2 513 66.3
Gohir.D09G196900 Gossypium hirsutum HOM05D005505 ORTHO05D006974 1.0e-189 667.2 513 65.1
Nn8g40056 Nelumbo nucifera HOM05D005505 ORTHO05D006974 1.0e-189 667.2 513 65.7
Medtr2g060550 Medicago truncatula HOM05D005505 ORTHO05D006974 6.7e-189 664.5 510 64.5
Peaxi162Scf00047g01039 Petunia axillaris HOM05D005505 ORTHO05D006974 8.8e-189 664.1 512 65.4
Nitab4.5_0004881g0030 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.2e-188 663.7 506 65.6
Lj3C565G3 Lonicera japonica HOM05D005505 ORTHO05D006974 1.5e-188 663.3 439 73.6
SGA_v2.0_scaffold57G20149 Striga asiatica HOM05D005505 ORTHO05D006974 1.5e-188 663.3 512 64.5
Psat7g176120 Pisum sativum HOM05D005505 ORTHO05D006974 2.0e-188 662.9 494 66.0
Lj5g0018216 Lotus japonicus HOM05D005505 ORTHO05D006974 5.7e-188 661.4 506 64.2
Oeu026858.1 Olea europaea HOM05D005505 ORTHO05D006974 5.7e-188 661.4 467 70.4
MBI10_g16825_MAGBIO Magnolia biondii HOM05D005505 ORTHO05D006974 9.7e-188 660.6 506 66.0
Psat3g151840 Pisum sativum HOM05D005505 ORTHO05D006974 1.7e-187 659.8 494 65.0
AT3G24200 Arabidopsis thaliana HOM05D005505 ORTHO05D006974 2.2e-187 659.4 512 65.2
Carub.0003s2430 Capsella rubella HOM05D005505 ORTHO05D006974 4.8e-187 658.3 513 64.5
Ca_07402_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 1.1e-186 657.1 510 63.5
BcaB06g26566 Brassica carinata HOM05D005505 ORTHO05D006974 1.8e-186 656.4 478 67.8
CARHR099990 Cardamine hirsuta HOM05D005505 ORTHO05D006974 2.4e-186 656.0 512 65.0
Thhalv10002522m.g Eutrema salsugineum HOM05D005505 ORTHO05D006974 3.1e-186 655.6 462 69.9
A07p08370 Brassica napus HOM05D005505 ORTHO05D006974 1.6e-185 653.3 512 63.9
BraA07t28623Z Brassica rapa HOM05D005505 ORTHO05D006974 2.0e-185 652.9 512 63.9
Aa31LG8G10580 Aethionema arabicum HOM05D005505 ORTHO05D006974 7.7e-185 651.0 509 62.7
BcaC06g35602 Brassica carinata HOM05D005505 ORTHO05D006974 1.3e-184 650.2 513 63.9
C07p13070 Brassica napus HOM05D005505 ORTHO05D006974 3.8e-184 648.7 476 66.8
C09p75660 Brassica napus HOM05D005505 ORTHO05D006974 3.8e-184 648.7 511 63.4
BolC7t41801H Brassica oleracea HOM05D005505 ORTHO05D006974 6.5e-184 647.9 476 66.8
Sc24g0002560 Simmondsia chinensis HOM05D005505 ORTHO05D006974 1.5e-183 646.7 511 63.4
GSVIVG01012536001 Vitis vinifera HOM05D005505 ORTHO05D006974 4.4e-180 635.2 489 66.1
ATR0787G156 Amborella trichopoda HOM05D005505 ORTHO05D006974 1.8e-178 629.8 505 62.0
PGSC0003DMG400029626 Solanum tuberosum HOM05D005505 ORTHO05D006974 1.8e-178 629.8 436 70.9
PSO017G4123 Papaver somniferum HOM05D005505 ORTHO05D006974 2.4e-178 629.4 477 63.9
Aqoxy2G03778 Aquilegia oxysepala HOM05D005505 ORTHO05D006974 3.1e-178 629.0 513 61.6
PSO063G3796 Papaver somniferum HOM05D005505 ORTHO05D006974 9.1e-178 627.5 477 63.3
EL10Ac7g18096 Beta vulgaris HOM05D005505 ORTHO05D006974 1.5e-175 620.2 492 62.6
Cpa.g.sc59.105 Carica papaya HOM05D005505 ORTHO05D006974 1.5e-175 620.2 546 59.5
Medtr7g051960 Medicago truncatula HOM05D005505 ORTHO05D006974 6.1e-174 614.8 432 68.3
unitig_32.g10868 Utricularia gibba HOM05D005505 ORTHO05D006974 4.0e-173 612.1 461 64.9
AUR62025680 Chenopodium quinoa HOM05D005505 ORTHO05D006974 2.8e-171 605.9 494 61.1
AUR62001295 Chenopodium quinoa HOM05D005505 ORTHO05D006974 1.1e-170 604.0 492 61.2
Duzib151G0717 Durio zibethinus HOM05D005505 ORTHO05D006974 5.9e-169 598.2 512 59.6
Os03g0839100 Oryza sativa ssp. japonica HOM05D005505 ORTHO05D006974 5.0e-168 595.1 518 58.7
Hund05658 Selenicereus undatus HOM05D005505 ORTHO05D006974 1.9e-167 593.2 533 58.3
Zm00001eb211070 Zea mays HOM05D005505 ORTHO05D006974 2.5e-167 592.8 504 59.3
Sp3g21750 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.0e-165 585.9 424 67.9
MD14G1116500 Malus domestica HOM05D005505 ORTHO05D006974 2.2e-163 579.7 428 66.4
SHI00938 Sapria himalayana HOM05D005505 ORTHO05D006974 2.1e-158 563.1 469 58.6
Lj3A578G8 Lonicera japonica HOM05D005505 ORTHO05D006974 3.7e-155 552.4 371 73.0
Lj3A579T16 Lonicera japonica HOM05D005505 ORTHO05D006974 7.8e-153 544.7 415 66.3
Haze_11578 Corylus avellana HOM05D005505 ORTHO05D006974 8.1e-150 534.6 355 73.0
SEGI_35699 Sequoiadendron giganteum HOM05D005505 ORTHO05D006974 5.8e-148 528.5 496 53.2
Dinv38263 Davidia involucrata HOM05D005505 ORTHO05D006974 4.9e-147 525.4 379 68.3
BcaC05g30344 Brassica carinata HOM05D005505 ORTHO05D007330 4.4e-140 502.3 510 52.9
SpUn0001_0240 Schrenkiella parvula HOM05D005505 ORTHO05D006974 7.8e-137 491.5 448 58.3
CDE02G0375 Ceratophyllum demersum HOM05D005505 ORTHO05D006974 1.7e-123 447.2 384 60.7
Mapoly0028s0013 Marchantia polymorpha HOM05D005505 ORTHO05D006974 3.3e-119 433.0 500 46.8
Lj3A580T64 Lonicera japonica HOM05D005505 ORTHO05D006974 4.8e-118 429.1 391 59.1
Pp3c26_12110 Physcomitrium patens HOM05D005505 ORTHO05D006974 8.4e-115 418.3 455 49.0
SMO351G0576 Selaginella moellendorffii HOM05D005505 ORTHO05D006974 6.0e-113 412.1 439 49.7
SpUn0001_0260 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.9e-112 409.5 511 46.2
arahy.Tifrunner.gnm1.ann1.NU2AG4 Arachis hypogaea HOM05D005505 ORTHO05D006974 4.3e-111 406.0 371 55.8
Lj3A565G17 Lonicera japonica HOM05D005505 ORTHO05D006974 3.0e-104 383.3 328 62.2
Gohir.D09G197033 Gossypium hirsutum HOM05D005505 ORTHO05D006974 1.2e-97 361.3 276 64.5
CAN.G220.36 Capsicum annuum HOM05D005505 ORTHO05D006974 3.6e-81 306.6 410 47.1
MCO15G051 Micromonas commoda HOM05D005505 ORTHO05D006974 9.7e-79 298.5 487 38.2
Cre02.g112850 Chlamydomonas reinhardtii HOM05D005505 ORTHO05D006974 3.3e-71 273.5 460 37.4
HPP92_019865 Vanilla planifolia HOM05D005505 ORTHO05D006974 4.5e-68 263.1 486 37.0
AL3G39020 Arabidopsis lyrata HOM05D005505 ORTHO05D006974 1.0e-67 261.9 242 57.4
PRCOL_00000308 Prasinoderma coloniale HOM05D005505 ORTHO05D006974 1.0e-59 235.3 371 38.8
BolC5t35086H Brassica oleracea HOM05D005505 ORTHO05D006974 3.0e-56 223.8 223 53.4
Lj3A566G16 Lonicera japonica HOM05D005505 ORTHO05D006974 1.3e-54 218.4 155 71.0
Cfa022008 Carpinus fangiana HOM05D005505 ORTHO05D006974 6.6e-51 206.1 459 30.5
CBR_g34017 Chara braunii HOM05D005505 ORTHO05D006974 5.2e-40 169.9 208 42.8
CBR_g34015 Chara braunii HOM05D005505 ORTHO05D006974 9.8e-39 165.6 246 41.1
SpUn0242_NC2199 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.3e-34 150.6 102 69.6
Lj3A578G7 Lonicera japonica HOM05D005505 ORTHO05D006974 3.6e-33 147.1 92 76.1
Haze_11577 Corylus avellana HOM05D005505 ORTHO05D006974 7.1e-29 132.9 124 56.5
Ca_29365_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 1.4e-21 108.6 344 25.6
Actinidia34626 Actinidia chinensis HOM05D005505 ORTHO05D006974 9.2e-21 105.9 110 50.9
Lj3A579T17 Lonicera japonica HOM05D005505 ORTHO05D006974 1.2e-15 89.0 65 66.2
CDE09G0201 Ceratophyllum demersum HOM05D000090 ORTHO05D001584 1.0e-11 75.9 49 77.6
AL3G39220 Arabidopsis lyrata HOM05D005505 ORTHO05D000101 5.1e-11 73.6 44 75.0
Lj3A565T20 Lonicera japonica HOM05D005505 ORTHO05D006974 6.6e-11 73.2 66 62.1


User provided reference genes

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