Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 4.5e-92 341.3 176 100.0
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 3.6e-33 145.6 147 55.8
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 8.1e-25 117.9 174 43.7
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 7.6e-23 111.3 124 48.4
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 2.2e-22 109.8 143 42.7
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.9e-22 109.4 148 45.3
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 2.1e-20 103.2 119 49.6
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.3e-19 99.8 139 46.8
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 2.5e-18 96.3 163 41.1
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 7.3e-18 94.7 175 41.1
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 2.8e-17 92.8 167 39.5
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 6.2e-17 91.7 157 37.6
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 6.2e-17 91.7 145 37.9
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 6.2e-17 91.7 137 41.6
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 3.1e-16 89.4 103 45.6
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 5.3e-16 88.6 141 37.6
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 5.3e-16 88.6 168 36.9
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 9.0e-16 87.8 126 42.1
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.2e-15 87.4 150 40.7
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 4.5e-15 85.5 98 51.0
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 9.9e-15 84.3 127 40.2
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 9.9e-15 84.3 106 50.0
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 1.3e-14 84.0 118 44.1
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 2.9e-14 82.8 158 36.7
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 2.9e-14 82.8 104 48.1
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 2.9e-14 82.8 125 44.8
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 3.8e-14 82.4 143 35.7
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 3.8e-14 82.4 143 35.7
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 1.1e-13 80.9 104 47.1
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 1.1e-13 80.9 114 43.0
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 3.2e-13 79.3 114 42.1
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 4.2e-13 79.0 145 40.0
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 9.3e-13 77.8 102 40.2
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 1.2e-12 77.4 140 37.9
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 3.5e-12 75.9 140 35.0
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.3e-11 73.9 115 42.6
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 2.3e-11 73.2 121 40.5
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 3.9e-11 72.4 92 48.9
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 3.9e-11 72.4 115 40.0
Migut.G00556 Erythranthe guttata HOM05D008157 ORTHO05D009575 3.9e-11 72.4 108 43.5
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 5.1e-11 72.0 96 43.8
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 5.1e-11 72.0 91 42.9
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 6.7e-11 71.6 172 34.3
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.1e-10 70.9 146 34.2
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.9e-10 70.1 132 43.9
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 3.3e-10 69.3 116 41.4
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 3.3e-10 69.3 101 41.6
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 4.3e-10 68.9 94 44.7
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 9.6e-10 67.8 122 39.3
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 1.3e-09 67.4 127 40.2
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 2.8e-09 66.2 114 38.6
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 4.8e-09 65.5 103 39.8
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 1.8e-08 63.5 133 34.6
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 4.0e-08 62.4 104 38.5
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 4.0e-08 62.4 67 49.3
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 2.0e-07 60.1 162 29.6
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 7.6e-07 58.2 94 41.5
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 9.9e-07 57.8 86 38.4
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 1.3e-06 57.4 129 33.3
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 1.3e-06 57.4 129 33.3
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 1.3e-06 57.4 97 40.2
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.7e-06 57.0 94 40.4
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 2.2e-06 56.6 86 41.9
VMungo0720G0558 Vigna mungo HOM05D016547 ORTHO05D009575 6.4e-06 55.1 101 37.6


User provided reference genes

Program Settings