Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030603 Daucus carota HOM05D000789 ORTHO05D030911 2.0e-56 222.2 113 100.0
DCAR_030604 Daucus carota HOM05D000789 ORTHO05D030911 2.0e-56 222.2 113 100.0
Actinidia36992 Actinidia chinensis HOM05D000789 ORTHO05D030911 2.1e-18 95.9 143 46.9
Dinv38403 Davidia involucrata HOM05D000789 ORTHO05D000897 4.4e-16 88.2 66 69.7
CSS0017584 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D000897 6.4e-15 84.3 260 30.0
PGSC0003DMG400008989 Solanum tuberosum HOM05D000789 ORTHO05D000897 7.0e-14 80.9 66 62.1
Dinv44489 Davidia involucrata HOM05D000789 ORTHO05D000897 1.2e-13 80.1 255 28.2
Solyc01g079870.4 Solanum lycopersicum HOM05D000789 ORTHO05D000897 3.5e-13 78.6 66 60.6
Sopen01g031630 Solanum pennellii HOM05D000789 ORTHO05D000897 3.5e-13 78.6 66 60.6
Cc03_g03220 Coffea canephora HOM05D000789 ORTHO05D000897 4.6e-13 78.2 66 65.2
CSS0003225 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D000897 1.3e-12 76.6 49 75.5
TAR365G0340 Trochodendron aralioides HOM05D000789 ORTHO05D000897 1.3e-12 76.6 262 30.5
Nitab4.5_0005927g0010 Nicotiana tabacum HOM05D000789 ORTHO05D000897 2.3e-12 75.9 66 60.6
TAR362G0975 Trochodendron aralioides HOM05D000789 ORTHO05D000897 2.3e-12 75.9 69 62.3
CAN.G69.29 Capsicum annuum HOM05D000789 ORTHO05D000897 3.9e-12 75.1 65 58.5
Aqoxy5G00518 Aquilegia oxysepala HOM05D000789 ORTHO05D000897 6.6e-12 74.3 69 62.3
PGSC0003DMG400003357 Solanum tuberosum HOM05D000789 ORTHO05D000897 8.6e-12 73.9 66 59.1
MSTRG.4000 Avicennia marina HOM05D000789 ORTHO05D000897 1.1e-11 73.6 67 62.7
Hma1.2p1_2553F.1_g324340 Hydrangea macrophylla HOM05D000789 ORTHO05D000897 3.3e-11 72.0 254 26.4
Rhsim02G0020800 Rhododendron simsii HOM05D000789 ORTHO05D000897 4.3e-11 71.6 55 65.5
CSS0004555 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D000897 7.3e-11 70.9 65 56.9
Psat0s1377g0200 Pisum sativum HOM05D000789 ORTHO05D000897 2.1e-10 69.3 67 56.7
SalBow2G0548 Salvia bowleyana HOM05D000789 ORTHO05D000897 2.1e-10 69.3 66 59.1
Actinidia40155 Actinidia chinensis HOM05D000789 ORTHO05D000897 6.2e-10 67.8 64 62.5
Oeu029306.3 Olea europaea HOM05D000789 ORTHO05D000897 8.1e-10 67.4 66 56.1
vmacro15314 Vaccinium macrocarpon HOM05D000789 ORTHO05D000897 1.1e-09 67.0 55 61.8
Potri.008G203500 Populus trichocarpa HOM05D000789 ORTHO05D000897 1.4e-09 66.6 68 57.4
TPR.G6037 Trifolium pratense HOM05D000789 ORTHO05D000897 1.4e-09 66.6 67 56.7
Gohir.D02G037000 Gossypium hirsutum HOM05D000789 ORTHO05D000897 2.3e-09 65.9 50 64.0
Gorai.005G040900 Gossypium raimondii HOM05D000789 ORTHO05D000897 2.3e-09 65.9 50 64.0
MD13G1185200 Malus domestica HOM05D000789 ORTHO05D000897 2.3e-09 65.9 65 55.4
Medtr1g082660 Medicago truncatula HOM05D000789 ORTHO05D000897 2.3e-09 65.9 65 56.9
PGR004G2707 Punica granatum HOM05D000789 ORTHO05D000897 4.0e-09 65.1 52 63.5
Ca_09365_v3 Cicer arietinum L. HOM05D000789 ORTHO05D000897 5.2e-09 64.7 66 56.1
CiPaw.01G161100 Carya illinoinensis HOM05D000789 ORTHO05D000897 6.8e-09 64.3 69 58.0
Medtr7g113680 Medicago truncatula HOM05D000789 ORTHO05D000897 8.9e-09 63.9 66 54.5
TWI73G0265 Tripterygium wilfordii HOM05D000789 ORTHO05D000897 8.9e-09 63.9 71 57.7
CSS0014833 Camellia sinensis var. sinensis HOM05D000789 ORTHO05D000897 1.2e-08 63.5 49 65.3
ECA234G3780 Erigeron canadensis HOM05D000789 ORTHO05D000897 1.2e-08 63.5 68 58.8
Dinv40269 Davidia involucrata HOM05D000789 ORTHO05D000897 1.5e-08 63.2 71 53.5
HanXRQChr10g0310981 Helianthus annuus HOM05D000789 ORTHO05D000897 1.5e-08 63.2 62 62.9
Actinidia24973 Actinidia chinensis HOM05D000789 ORTHO05D000897 2.0e-08 62.8 65 52.3
MSTRG.10012 Avicennia marina HOM05D000789 ORTHO05D000897 2.6e-08 62.4 66 56.1
Cfa015596 Carpinus fangiana HOM05D000789 ORTHO05D000897 2.6e-08 62.4 68 57.4
HanXRQChr12g0359321 Helianthus annuus HOM05D000789 ORTHO05D000897 2.6e-08 62.4 68 57.4
Actinidia08512 Actinidia chinensis HOM05D000789 ORTHO05D000897 3.4e-08 62.0 73 54.8
MD16G1185900 Malus domestica HOM05D000789 ORTHO05D000897 4.4e-08 61.6 59 64.4
Nn1g02180 Nelumbo nucifera HOM05D000789 ORTHO05D000897 4.4e-08 61.6 62 58.1
Thecc.04G224000 Theobroma cacao HOM05D000789 ORTHO05D000897 4.4e-08 61.6 62 56.5
CiPaw.07G015800 Carya illinoinensis HOM05D000789 ORTHO05D000897 5.8e-08 61.2 69 53.6
Psat3g010480 Pisum sativum HOM05D000789 ORTHO05D000897 5.8e-08 61.2 66 54.5
Rhsim05G0143500 Rhododendron simsii HOM05D000789 ORTHO05D000897 5.8e-08 61.2 69 55.1
TPR.G33187 Trifolium pratense HOM05D000789 ORTHO05D000897 7.5e-08 60.8 66 54.5
VMungo0314G0001 Vigna mungo HOM05D000789 ORTHO05D000897 7.5e-08 60.8 66 54.5
Atru.chr2.460 Acer truncatum HOM05D000789 ORTHO05D000897 9.9e-08 60.5 70 54.3
Cfa006562 Carpinus fangiana HOM05D000789 ORTHO05D000897 9.9e-08 60.5 69 53.6
Dinv23963 Davidia involucrata HOM05D000789 ORTHO05D000897 9.9e-08 60.5 70 52.9
FvH4_6g05540 Fragaria vesca HOM05D000789 ORTHO05D000897 9.9e-08 60.5 43 62.8
FAN02G0341 Fragaria x ananassa HOM05D000789 ORTHO05D000897 9.9e-08 60.5 43 62.8
FAN14G3079 Fragaria x ananassa HOM05D000789 ORTHO05D000897 9.9e-08 60.5 43 62.8
FAN14G3104 Fragaria x ananassa HOM05D000789 ORTHO05D000897 9.9e-08 60.5 43 62.8
Gohir.A02G029200 Gossypium hirsutum HOM05D000789 ORTHO05D000897 9.9e-08 60.5 50 60.0
Sabra08G0158000 Salix brachista HOM05D000789 ORTHO05D000897 1.3e-07 60.1 62 54.8
COL.COLO4_26625 Corchorus olitorius HOM05D000789 ORTHO05D000897 1.7e-07 59.7 63 57.1
Duzib212G0207 Durio zibethinus HOM05D000789 ORTHO05D000897 1.7e-07 59.7 63 60.3
Potri.010G032301 Populus trichocarpa HOM05D000789 ORTHO05D000897 1.7e-07 59.7 68 54.4
Prupe.1G152500 Prunus persica HOM05D000789 ORTHO05D000897 1.7e-07 59.7 66 53.0
vmacro19635 Vaccinium macrocarpon HOM05D000789 ORTHO05D000897 1.7e-07 59.7 69 53.6
FAN07G0474 Fragaria x ananassa HOM05D000789 ORTHO05D000897 2.2e-07 59.3 67 50.7
Glyma.19G236400 Glycine max HOM05D000789 ORTHO05D000897 2.2e-07 59.3 65 52.3
RcHm_v2.0_Chr3g0454311 Rosa chinensis HOM05D000789 ORTHO05D000897 2.2e-07 59.3 43 60.5
Haze_04221 Corylus avellana HOM05D000789 ORTHO05D000897 2.9e-07 58.9 69 52.2
Hma1.2p1_1362F.1_g278250 Hydrangea macrophylla HOM05D000789 ORTHO05D000897 2.9e-07 58.9 70 50.0
Lalb_Chr15g0077171 Lupinus albus HOM05D000789 ORTHO05D000897 2.9e-07 58.9 71 50.7
Manes.03G183200 Manihot esculenta HOM05D000789 ORTHO05D000897 2.9e-07 58.9 68 55.9
RcHm_v2.0_Chr4g0417851 Rosa chinensis HOM05D000789 ORTHO05D000897 2.9e-07 58.9 67 50.7
CANSAT78G2231 Cannabis sativa HOM05D000789 ORTHO05D000897 3.7e-07 58.5 64 57.8
FAN17G1141 Fragaria x ananassa HOM05D000789 ORTHO05D000897 3.7e-07 58.5 65 50.8
Nn1g06292 Nelumbo nucifera HOM05D000789 ORTHO05D000897 3.7e-07 58.5 256 26.6
Haze_00948 Corylus avellana HOM05D000789 ORTHO05D000897 4.9e-07 58.2 68 54.4
FAN22G1835 Fragaria x ananassa HOM05D000789 ORTHO05D000897 4.9e-07 58.2 65 50.8
arahy.Tifrunner.gnm1.ann1.0G5T8T Arachis hypogaea HOM05D000789 ORTHO05D000897 6.4e-07 57.8 65 52.3
arahy.Tifrunner.gnm1.ann1.WLF6LC Arachis hypogaea HOM05D000789 ORTHO05D000897 6.4e-07 57.8 65 52.3
CiPaw.08G166100 Carya illinoinensis HOM05D000789 ORTHO05D000897 6.4e-07 57.8 69 50.7
Nn4g26212 Nelumbo nucifera HOM05D000789 ORTHO05D000897 6.4e-07 57.8 68 50.0
SEGI_10148 Sequoiadendron giganteum HOM05D000789 ORTHO05D000897 6.4e-07 57.8 67 53.7
FvH4_4g14750 Fragaria vesca HOM05D000789 ORTHO05D000897 8.3e-07 57.4 67 49.3
FAN12G0903 Fragaria x ananassa HOM05D000789 ORTHO05D000897 8.3e-07 57.4 67 49.3
Lalb_Chr04g0260821 Lupinus albus HOM05D000789 ORTHO05D000897 8.3e-07 57.4 71 49.3
CiPaw.02G093200 Carya illinoinensis HOM05D000789 ORTHO05D000897 1.1e-06 57.0 47 53.2
Ciclev10002193m.g Citrus clementina HOM05D000789 ORTHO05D000897 1.1e-06 57.0 69 53.6
Lj3P750T35 Lonicera japonica HOM05D000789 ORTHO05D000897 1.1e-06 57.0 46 65.2
Duzib177G1101 Durio zibethinus HOM05D000789 ORTHO05D000897 1.4e-06 56.6 41 61.0
FAN05G2572 Fragaria x ananassa HOM05D000789 ORTHO05D000897 1.4e-06 56.6 43 60.5
FAN05G3441 Fragaria x ananassa HOM05D000789 ORTHO05D000897 1.4e-06 56.6 43 60.5
Lalb_Chr18g0045561 Lupinus albus HOM05D000789 ORTHO05D000897 1.4e-06 56.6 71 49.3
Manes.09G165000 Manihot esculenta HOM05D000789 ORTHO05D000897 1.4e-06 56.6 47 51.1
QL03p005207 Quercus lobata HOM05D000789 ORTHO05D000897 1.4e-06 56.6 69 52.2
QL03p006174 Quercus lobata HOM05D000789 ORTHO05D000897 1.4e-06 56.6 69 52.2
Phvul.006G093200 Phaseolus vulgaris HOM05D000789 ORTHO05D000897 1.9e-06 56.2 66 51.5
Potri.005G035800 Populus trichocarpa HOM05D000789 ORTHO05D000897 1.9e-06 56.2 69 50.7
Thecc.05G306100 Theobroma cacao HOM05D000789 ORTHO05D000897 1.9e-06 56.2 69 50.7
COL.COLO4_13502 Corchorus olitorius HOM05D000789 ORTHO05D000897 2.4e-06 55.8 47 57.4
Duzib128G0555 Durio zibethinus HOM05D000789 ORTHO05D000897 2.4e-06 55.8 69 50.7
Lalb_Chr02g0148321 Lupinus albus HOM05D000789 ORTHO05D000897 2.4e-06 55.8 60 56.7
MD12G1221800 Malus domestica HOM05D000789 ORTHO05D000897 2.4e-06 55.8 69 50.7
Potri.013G025000 Populus trichocarpa HOM05D000789 ORTHO05D000897 2.4e-06 55.8 69 50.7
Migut.G00300 Erythranthe guttata HOM05D000789 ORTHO05D000897 3.2e-06 55.5 71 50.7
Gohir.A08G211200 Gossypium hirsutum HOM05D000789 ORTHO05D000897 3.2e-06 55.5 69 50.7
Gohir.D08G228000 Gossypium hirsutum HOM05D000789 ORTHO05D000897 3.2e-06 55.5 69 50.7
Gorai.004G242200 Gossypium raimondii HOM05D000789 ORTHO05D000897 3.2e-06 55.5 69 50.7
Prupe.6G328500 Prunus persica HOM05D000789 ORTHO05D000897 4.1e-06 55.1 69 49.3
Sabra05G0036300 Salix brachista HOM05D000789 ORTHO05D000897 4.1e-06 55.1 69 49.3
TWI09G1450 Tripterygium wilfordii HOM05D000789 ORTHO05D000897 4.1e-06 55.1 59 55.9
Sabra10G0010700 Salix brachista HOM05D000789 ORTHO05D000897 5.4e-06 54.7 68 54.4
Actinidia23504 Actinidia chinensis HOM05D000789 ORTHO05D000897 9.2e-06 53.9 56 57.1
Ca_10100_v3 Cicer arietinum L. HOM05D000789 ORTHO05D000897 9.2e-06 53.9 65 50.8
Eucgr.H04476 Eucalyptus grandis HOM05D000789 ORTHO05D000897 9.2e-06 53.9 52 51.9


User provided reference genes

Program Settings