Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 7.4e-36 153.3 75 100.0
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.4e-26 122.5 72 80.6
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 7.0e-26 120.2 72 79.2
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 9.1e-26 119.8 73 76.7
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.2e-25 119.4 73 72.6
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.5e-25 119.0 73 74.0
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.5e-25 119.0 75 72.0
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 4.5e-25 117.5 73 75.3
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.9e-25 117.1 72 76.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.9e-25 117.1 72 76.4
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 7.7e-25 116.7 72 75.0
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 75.0
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.7e-24 115.5 72 76.4
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 2.2e-24 115.2 73 74.0
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 2.2e-24 115.2 73 74.0
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.2e-24 115.2 71 74.6
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.9e-24 114.8 72 75.0
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 3.8e-24 114.4 73 72.6
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 3.8e-24 114.4 73 72.6
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 3.8e-24 114.4 73 72.6
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 5.0e-24 114.0 72 73.6
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.0e-24 114.0 73 71.2
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.0e-24 114.0 73 71.2
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 6.5e-24 113.6 72 72.2
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.5e-24 113.6 72 73.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.5e-24 113.6 72 73.6
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 8.5e-24 113.2 73 74.0
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 75.0
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 1.4e-23 112.5 66 78.8
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.4e-23 112.5 72 73.6
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.9e-23 112.1 72 73.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 1.9e-23 112.1 72 72.2
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 2.5e-23 111.7 70 72.9
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.5e-23 111.7 72 70.8
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 2.5e-23 111.7 72 70.8
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 2.5e-23 111.7 73 69.9
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 2.5e-23 111.7 73 69.9
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 3.2e-23 111.3 72 72.2
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 3.2e-23 111.3 72 72.2
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 3.2e-23 111.3 73 71.2
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 4.2e-23 110.9 71 73.2
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 5.5e-23 110.5 73 72.6
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 7.2e-23 110.2 72 72.2
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 7.2e-23 110.2 71 70.4
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 9.4e-23 109.8 73 68.5
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 9.4e-23 109.8 70 71.4
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 9.4e-23 109.8 73 71.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-22 109.4 72 70.8
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.2e-22 109.4 66 77.3
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.6e-22 109.0 73 68.5
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.6e-22 109.0 72 70.8
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 1.6e-22 109.0 72 70.8
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.6e-22 109.0 72 72.2
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 2.1e-22 108.6 72 70.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.1e-22 108.6 72 70.8
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.1e-22 108.6 72 70.8
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.1e-22 108.6 72 70.8
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.1e-22 108.6 72 69.4
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 2.1e-22 108.6 72 70.8
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 2.1e-22 108.6 75 69.3
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 2.7e-22 108.2 66 74.2
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 2.7e-22 108.2 72 70.8
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 3.6e-22 107.8 72 68.1
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.7e-22 107.5 72 69.4
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 6.1e-22 107.1 72 72.2
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 2.3e-21 105.1 72 69.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 6.7e-21 103.6 64 76.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.1e-20 102.8 71 70.4
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.0e-20 102.1 69 66.7
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.6e-20 101.7 62 75.8
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 2.6e-20 101.7 64 71.9
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 4.4e-20 100.9 85 61.2
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.4e-20 100.9 83 60.2
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 7.4e-20 100.1 69 69.6
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 7.4e-20 100.1 75 66.7
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.7e-19 99.0 68 67.6
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.7e-19 99.0 69 66.7
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 2.8e-19 98.2 72 68.1
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 8.2e-19 96.7 72 65.3
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.8e-18 95.5 69 63.8
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 4.1e-18 94.4 83 56.6
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.6e-17 92.4 64 65.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 5.9e-17 90.5 64 64.1
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 7.7e-17 90.1 101 49.5
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.5e-15 85.9 131 39.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.9e-15 85.5 137 39.4
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 7.2e-15 83.6 69 56.5
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.2e-14 82.8 72 59.7
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 2.7e-14 81.6 49 77.6
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.6e-14 81.3 61 60.7
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 4.7e-14 80.9 52 76.9
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 8.8e-13 76.6 70 55.7
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 3.4e-12 74.7 50 68.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 4.8e-11 70.9 73 52.1
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 8.3e-11 70.1 42 78.6
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 2.4e-10 68.6 60 58.3
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 4.5e-09 64.3 42 71.4
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 5.9e-09 63.9 37 70.3
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.0e-08 63.2 39 74.4
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 1.0e-08 63.2 42 71.4
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.7e-08 62.4 167 28.7
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 3.8e-08 61.2 42 66.7
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 3.8e-08 61.2 35 80.0
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 5.0e-08 60.8 41 70.7
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 6.5e-08 60.5 46 60.9
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.5e-07 58.5 42 71.4
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 3.2e-07 58.2 42 66.7
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 7.2e-07 57.0 58 48.3
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 9.4e-07 56.6 48 54.2
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 2.7e-06 55.1 31 77.4
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.7e-06 55.1 39 64.1
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 8.0e-06 53.5 31 71.0
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 8.0e-06 53.5 41 65.9


User provided reference genes

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