Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030514 Daucus carota HOM05D003304 ORTHO05D003762 3.3e-128 461.8 255 100.0
DCAR_002474 Daucus carota HOM05D003304 ORTHO05D003762 4.0e-33 146.0 215 47.4
Dinv29740 Davidia involucrata HOM05D003304 ORTHO05D003762 1.1e-27 127.9 265 39.2
Actinidia14289 Actinidia chinensis HOM05D003304 ORTHO05D003762 8.1e-26 121.7 319 33.9
SalBow5G3057 Salvia bowleyana HOM05D003304 ORTHO05D003762 1.8e-25 120.6 247 42.1
CDE02G3640 Ceratophyllum demersum HOM05D003304 ORTHO05D003762 2.0e-24 117.1 290 33.4
ECA240G0321 Erigeron canadensis HOM05D003304 ORTHO05D003762 1.3e-23 114.4 344 33.4
CAN.G484.45 Capsicum annuum HOM05D003304 ORTHO05D003762 1.7e-23 114.0 245 36.7
Rhsim02G0007700 Rhododendron simsii HOM05D003304 ORTHO05D003762 2.9e-23 113.2 268 35.4
Lsat_1_v5_gn_6_95300 Lactuca sativa HOM05D003304 ORTHO05D003762 4.9e-23 112.5 312 35.6
Nitab4.5_0000513g0170 Nicotiana tabacum HOM05D003304 ORTHO05D003762 4.9e-23 112.5 318 34.3
Cc03_g01680 Coffea canephora HOM05D003304 ORTHO05D003762 1.9e-22 110.5 307 33.6
DCAR_023290 Daucus carota HOM05D003304 ORTHO05D003762 1.9e-22 110.5 282 34.4
CDE09G0254 Ceratophyllum demersum HOM05D003304 ORTHO05D003762 3.2e-22 109.8 290 33.4
Hma1.2p1_0078F.1_g040430 Hydrangea macrophylla HOM05D003304 ORTHO05D003762 3.2e-22 109.8 259 36.3
Nitab4.5_0005362g0020 Nicotiana tabacum HOM05D003304 ORTHO05D003762 3.2e-22 109.8 311 35.0
SGA_v2.0_scaffold18G08346 Striga asiatica HOM05D003304 ORTHO05D003762 7.1e-22 108.6 281 34.2
Oeu016249.1 Olea europaea HOM05D003304 ORTHO05D003762 9.3e-22 108.2 241 33.6
Solyc12g099450.3 Solanum lycopersicum HOM05D003304 ORTHO05D003762 9.3e-22 108.2 263 35.4
Oeu016250.1 Olea europaea HOM05D003304 ORTHO05D003762 1.2e-21 107.8 243 33.3
Sopen12g034120 Solanum pennellii HOM05D003304 ORTHO05D003762 1.2e-21 107.8 262 35.5
MSTRG.3901 Avicennia marina HOM05D003304 ORTHO05D003762 2.7e-21 106.7 309 33.0
Glyma.09G043300 Glycine max HOM05D003304 ORTHO05D003762 4.6e-21 105.9 241 38.6
PGSC0003DMG400004631 Solanum tuberosum HOM05D003304 ORTHO05D003762 1.0e-20 104.8 262 34.4
TWI53G1575 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 1.3e-20 104.4 293 35.2
Peaxi162Scf00646g00329 Petunia axillaris HOM05D003304 ORTHO05D003762 1.8e-20 104.0 299 38.5
SGA_v2.0_scaffold428G51527 Striga asiatica HOM05D003304 ORTHO05D003762 1.8e-20 104.0 296 34.8
TWI73G0854 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 1.8e-20 104.0 290 33.8
DCAR_027060 Daucus carota HOM05D003304 ORTHO05D003762 2.3e-20 103.6 304 33.6
Nitab4.5_0000570g0270 Nicotiana tabacum HOM05D003304 ORTHO05D003762 8.7e-20 101.7 250 36.0
ClCG06G005040 Citrullus lanatus HOM05D003304 ORTHO05D003762 1.1e-19 101.3 298 31.9
Glyma.15G149700 Glycine max HOM05D003304 ORTHO05D003762 1.9e-19 100.5 257 35.0
Potri.010G012000 Populus trichocarpa HOM05D003304 ORTHO05D003762 2.5e-19 100.1 308 31.2
Oeu053986.1 Olea europaea HOM05D003304 ORTHO05D003762 4.3e-19 99.4 311 35.4
Sabra10G0007700 Salix brachista HOM05D003304 ORTHO05D003762 7.4e-19 98.6 304 30.9
Oeu006408.1 Olea europaea HOM05D003304 ORTHO05D003762 9.6e-19 98.2 318 31.1
MELO3C021319.2 Cucumis melo HOM05D003304 ORTHO05D003762 1.3e-18 97.8 298 33.6
HanXRQChr03g0089411 Helianthus annuus HOM05D003304 ORTHO05D003762 2.1e-18 97.1 353 32.3
CsaV3_6G023920 Cucumis sativus L. HOM05D003304 ORTHO05D003762 2.8e-18 96.7 296 33.4
Lalb_Chr13g0303541 Lupinus albus HOM05D003304 ORTHO05D003762 2.8e-18 96.7 321 31.2
SGA_v2.0_scaffold67G22614 Striga asiatica HOM05D003304 ORTHO05D003762 2.8e-18 96.7 298 32.9
Actinidia19582 Actinidia chinensis HOM05D003304 ORTHO05D003762 3.7e-18 96.3 294 32.0
Lj6g0014556 Lotus japonicus HOM05D003304 ORTHO05D003762 3.7e-18 96.3 288 35.8
Medtr2g436340 Medicago truncatula HOM05D003304 ORTHO05D003762 3.7e-18 96.3 310 35.8
SGA_v2.0_scaffold9G04881 Striga asiatica HOM05D003304 ORTHO05D003762 3.7e-18 96.3 300 35.0
Nitab4.5_0000895g0020 Nicotiana tabacum HOM05D003304 ORTHO05D003762 1.4e-17 94.4 231 34.6
TWI09G1044 Tripterygium wilfordii HOM05D003304 ORTHO05D003762 1.8e-17 94.0 270 31.9
Manes.15G011400 Manihot esculenta HOM05D003304 ORTHO05D003762 2.4e-17 93.6 318 34.9
Actinidia40286 Actinidia chinensis HOM05D003304 ORTHO05D003762 5.3e-17 92.4 253 32.4
TAR622G1126 Trochodendron aralioides HOM05D003304 ORTHO05D003762 6.9e-17 92.0 294 36.1
Migut.N00085 Erythranthe guttata HOM05D003304 ORTHO05D003762 1.2e-16 91.3 278 34.2
QL06p009983 Quercus lobata HOM05D003304 ORTHO05D003762 1.5e-16 90.9 324 33.0
QL93p2007_0071 Quercus lobata HOM05D003304 ORTHO05D003762 1.5e-16 90.9 324 33.0
HanXRQChr13g0420021 Helianthus annuus HOM05D003304 ORTHO05D003762 2.0e-16 90.5 317 31.5
AUR62016930 Chenopodium quinoa HOM05D003304 ORTHO05D003762 2.6e-16 90.1 259 30.1
Gorai.006G261600 Gossypium raimondii HOM05D003304 ORTHO05D003762 2.6e-16 90.1 244 41.8
CiPaw.01G146800 Carya illinoinensis HOM05D003304 ORTHO05D003762 3.4e-16 89.7 371 29.6
VMungo1309G2051 Vigna mungo HOM05D003304 ORTHO05D003762 3.4e-16 89.7 225 39.6
RcHm_v2.0_Chr4g0422951 Rosa chinensis HOM05D003304 ORTHO05D003762 4.5e-16 89.4 312 30.4
A02p37880 Brassica napus HOM05D003304 ORTHO05D003762 7.6e-16 88.6 272 33.1
Oeu001109.1 Olea europaea HOM05D003304 ORTHO05D003762 7.6e-16 88.6 287 35.9
FAN07G2181 Fragaria x ananassa HOM05D003304 ORTHO05D003762 1.0e-15 88.2 302 31.8
FAN17G2918 Fragaria x ananassa HOM05D003304 ORTHO05D003762 1.3e-15 87.8 308 31.5
HPP92_024308 Vanilla planifolia HOM05D003304 ORTHO05D003762 1.3e-15 87.8 205 35.6
FAN12G1565 Fragaria x ananassa HOM05D003304 ORTHO05D003762 1.7e-15 87.4 309 29.8
HPP92_024289 Vanilla planifolia HOM05D003304 ORTHO05D003762 1.7e-15 87.4 205 35.6
FvH4_4g18460 Fragaria vesca HOM05D003304 ORTHO05D003762 2.2e-15 87.0 310 29.7
FAN12G0090 Fragaria x ananassa HOM05D003304 ORTHO05D003762 2.2e-15 87.0 306 29.4
Phvul.003G096600 Phaseolus vulgaris HOM05D003304 ORTHO05D003762 2.2e-15 87.0 322 32.3
Gohir.A09G238000 Gossypium hirsutum HOM05D003304 ORTHO05D003762 3.8e-15 86.3 239 42.3
BcaC03g17695 Brassica carinata HOM05D003304 ORTHO05D003762 4.9e-15 85.9 270 35.2
BcaC05g30564 Brassica carinata HOM05D003304 ORTHO05D003762 4.9e-15 85.9 238 33.2
C02p57040 Brassica napus HOM05D003304 ORTHO05D003762 4.9e-15 85.9 270 35.2
BolC2t11774H Brassica oleracea HOM05D003304 ORTHO05D003762 4.9e-15 85.9 270 35.2
Ciclev10004985m.g Citrus clementina HOM05D003304 ORTHO05D003762 4.9e-15 85.9 303 29.0
Nn4g22032 Nelumbo nucifera HOM05D003304 ORTHO05D003762 4.9e-15 85.9 308 32.5
VMungo1215G1188 Vigna mungo HOM05D003304 ORTHO05D003762 4.9e-15 85.9 320 30.9
MD13G1166900 Malus domestica HOM05D003304 ORTHO05D003762 6.5e-15 85.5 340 30.9
MD16G1166700 Malus domestica HOM05D003304 ORTHO05D003762 6.5e-15 85.5 328 30.2
TPR.G31283 Trifolium pratense HOM05D003304 ORTHO05D003762 8.4e-15 85.1 300 31.3
Sabra08G0152100 Salix brachista HOM05D003304 ORTHO05D003762 1.1e-14 84.7 309 30.1
BraA02t08771Z Brassica rapa HOM05D003304 ORTHO05D003762 1.4e-14 84.3 274 35.8
Sed0002765 Sechium edule HOM05D003304 ORTHO05D003762 1.4e-14 84.3 314 29.9
PGSC0003DMG400035598 Solanum tuberosum HOM05D003304 ORTHO05D003762 1.4e-14 84.3 303 29.7
Aqoxy3G03400 Aquilegia oxysepala HOM05D003304 ORTHO05D003762 1.9e-14 84.0 266 36.1
CsaV3_3G014790 Cucumis sativus L. HOM05D003304 ORTHO05D003762 1.9e-14 84.0 290 31.0
Gohir.D09G238900 Gossypium hirsutum HOM05D003304 ORTHO05D003762 2.5e-14 83.6 233 39.9
Solyc01g066640.2 Solanum lycopersicum HOM05D003304 ORTHO05D003762 2.5e-14 83.6 285 30.2
Cpa.g.sc16.193 Carica papaya HOM05D003304 ORTHO05D003762 3.2e-14 83.2 331 29.9
BcaC09g47926 Brassica carinata HOM05D003304 ORTHO05D003762 4.2e-14 82.8 253 35.6
AL8G22610 Arabidopsis lyrata HOM05D003304 ORTHO05D003762 5.5e-14 82.4 301 28.9
MELO3C006676.2 Cucumis melo HOM05D003304 ORTHO05D003762 5.5e-14 82.4 295 30.5
GSVIVG01035139001 Vitis vinifera HOM05D003304 ORTHO05D003762 5.5e-14 82.4 278 34.2
Thecc.04G287300 Theobroma cacao HOM05D003304 ORTHO05D003762 7.1e-14 82.0 325 30.8
Dinv44362 Davidia involucrata HOM05D003304 ORTHO05D003762 9.3e-14 81.6 135 42.2
BolC1t05580H Brassica oleracea HOM05D003304 ORTHO05D003762 1.2e-13 81.3 288 32.6
BcaB07g34216 Brassica carinata HOM05D003304 ORTHO05D003762 1.6e-13 80.9 288 34.0
A06p38580 Brassica napus HOM05D003304 ORTHO05D003762 2.1e-13 80.5 284 32.4
Hund24887 Selenicereus undatus HOM05D003304 ORTHO05D003762 2.1e-13 80.5 316 27.5
AL3G18000 Arabidopsis lyrata HOM05D003304 ORTHO05D003762 2.7e-13 80.1 307 27.7
Duzib052G0413 Durio zibethinus HOM05D003304 ORTHO05D003762 2.7e-13 80.1 321 29.9
PGR004G2799 Punica granatum HOM05D003304 ORTHO05D003762 2.7e-13 80.1 316 29.1
SalBow2G2784 Salvia bowleyana HOM05D003304 ORTHO05D003762 2.7e-13 80.1 189 34.9
AT5G49100 Arabidopsis thaliana HOM05D003304 ORTHO05D003762 3.5e-13 79.7 310 28.1
Psat1g155200 Pisum sativum HOM05D003304 ORTHO05D003762 3.5e-13 79.7 288 31.6
AT3G06868 Arabidopsis thaliana HOM05D003304 ORTHO05D003762 6.0e-13 79.0 298 31.2
A03p34930 Brassica napus HOM05D003304 ORTHO05D003762 6.0e-13 79.0 262 30.5
C03p42510 Brassica napus HOM05D003304 ORTHO05D003762 6.0e-13 79.0 232 35.3
BolC3t16521H Brassica oleracea HOM05D003304 ORTHO05D003762 6.0e-13 79.0 232 35.3
Carub.0008s0891 Capsella rubella HOM05D003304 ORTHO05D003762 6.0e-13 79.0 278 29.9
Phvul.009G249600 Phaseolus vulgaris HOM05D003304 ORTHO05D003762 7.9e-13 78.6 243 32.5
Sed0000258 Sechium edule HOM05D003304 ORTHO05D003762 7.9e-13 78.6 280 30.7
BNapus_Darmor_BZH_scaffold_117p00150 Brassica napus HOM05D003304 ORTHO05D003762 1.0e-12 78.2 287 32.1
CARHR081490 Cardamine hirsuta HOM05D003304 ORTHO05D003762 1.0e-12 78.2 291 34.0
unitig_32.g11868 Utricularia gibba HOM05D003304 ORTHO05D003762 1.3e-12 77.8 260 31.9
Thhalv10021990m.g Eutrema salsugineum HOM05D003304 ORTHO05D003762 2.3e-12 77.0 293 30.4
Sp3g05830 Schrenkiella parvula HOM05D003304 ORTHO05D003762 2.3e-12 77.0 265 33.2
Carub.0003s0640 Capsella rubella HOM05D003304 ORTHO05D003762 3.0e-12 76.6 299 31.1
BraA06t26773Z Brassica rapa HOM05D003304 ORTHO05D003762 5.1e-12 75.9 297 33.7
BraA01t04408Z Brassica rapa HOM05D003304 ORTHO05D003762 6.7e-12 75.5 287 31.0
Lj4g0014231 Lotus japonicus HOM05D003304 ORTHO05D003762 6.7e-12 75.5 340 30.3
Aa31LG5G17450 Aethionema arabicum HOM05D003304 ORTHO05D003762 8.7e-12 75.1 285 30.9
THA.LOC104827338 Tarenaya hassleriana HOM05D003304 ORTHO05D003762 8.7e-12 75.1 371 25.3
Glyma.17G027500 Glycine max HOM05D003304 ORTHO05D003762 1.9e-11 73.9 314 29.3
Psat4g026560 Pisum sativum HOM05D003304 ORTHO05D003762 1.9e-11 73.9 307 28.3
PGR031G2491 Punica granatum HOM05D003304 ORTHO05D003762 1.9e-11 73.9 237 35.4
Sopen01g028290 Solanum pennellii HOM05D003304 ORTHO05D003762 1.9e-11 73.9 302 31.1
vmacro15219 Vaccinium macrocarpon HOM05D003304 ORTHO05D003762 1.9e-11 73.9 82 53.7
Gohir.D10G171500 Gossypium hirsutum HOM05D003304 ORTHO05D003762 3.3e-11 73.2 311 28.9
Gorai.011G191600 Gossypium raimondii HOM05D003304 ORTHO05D003762 5.7e-11 72.4 312 28.8
Sed0009993 Sechium edule HOM05D003304 ORTHO05D003762 5.7e-11 72.4 298 29.9
Gohir.A10G165400 Gossypium hirsutum HOM05D003304 ORTHO05D003762 7.4e-11 72.0 311 29.3
Peaxi162Scf00246g00127 Petunia axillaris HOM05D003304 ORTHO05D003762 9.6e-11 71.6 312 29.5
A05p41260 Brassica napus HOM05D003304 ORTHO05D003762 1.3e-10 71.2 281 31.0
BolC7t44491H Brassica oleracea HOM05D003304 ORTHO05D003762 1.3e-10 71.2 267 34.1
BraA03t12673Z Brassica rapa HOM05D003304 ORTHO05D003762 1.3e-10 71.2 274 28.5
BraA05t22849Z Brassica rapa HOM05D003304 ORTHO05D003762 1.6e-10 70.9 281 31.0
COL.COLO4_13834 Corchorus olitorius HOM05D003304 ORTHO05D003762 1.6e-10 70.9 66 60.6
C05p60480 Brassica napus HOM05D003304 ORTHO05D003762 2.1e-10 70.5 283 31.4
Lalb_Chr15g0083391 Lupinus albus HOM05D003304 ORTHO05D003762 2.1e-10 70.5 299 26.8
BolC5t34702H Brassica oleracea HOM05D003304 ORTHO05D003762 2.8e-10 70.1 276 31.5
CARHR182640 Cardamine hirsuta HOM05D003304 ORTHO05D003762 2.8e-10 70.1 317 30.3
Glyma.07G246500 Glycine max HOM05D003304 ORTHO05D003762 2.8e-10 70.1 310 28.7
CAN.G261.4 Capsicum annuum HOM05D003304 ORTHO05D003762 3.7e-10 69.7 291 28.2
Sp2g19450 Schrenkiella parvula HOM05D003304 ORTHO05D003762 3.7e-10 69.7 101 43.6
Haze_01180 Corylus avellana HOM05D003304 ORTHO05D003762 6.3e-10 68.9 83 51.8
SHI00254 Sapria himalayana HOM05D003304 ORTHO05D003762 8.2e-10 68.6 292 27.7
Eucgr.H03942 Eucalyptus grandis HOM05D003304 ORTHO05D003762 1.1e-09 68.2 245 30.2
Duzib212G1014 Durio zibethinus HOM05D003304 ORTHO05D003762 1.4e-09 67.8 324 28.4
Potri.008G220700 Populus trichocarpa HOM05D003304 ORTHO05D003762 1.8e-09 67.4 65 58.5
Prupe.1G133400 Prunus persica HOM05D003304 ORTHO05D003762 1.8e-09 67.4 51 64.7
unitig_26.g10550 Utricularia gibba HOM05D003304 ORTHO05D003762 1.8e-09 67.4 232 29.3
Zm00001eb084360 Zea mays HOM05D003304 ORTHO05D003762 1.8e-09 67.4 74 51.4
Lalb_Chr07g0177821 Lupinus albus HOM05D003304 ORTHO05D003762 2.4e-09 67.0 74 55.4
Ca_01922_v3 Cicer arietinum L. HOM05D003304 ORTHO05D003762 4.1e-09 66.2 117 42.7
Eucgr.B01602 Eucalyptus grandis HOM05D003304 ORTHO05D003762 4.1e-09 66.2 70 57.1
Os04g0405500 Oryza sativa ssp. japonica HOM05D003304 ORTHO05D003762 4.1e-09 66.2 95 44.2
Manes.03G197200 Manihot esculenta HOM05D003304 ORTHO05D003762 5.3e-09 65.9 299 33.1
THA.LOC104818917 Tarenaya hassleriana HOM05D003304 ORTHO05D003762 6.9e-09 65.5 103 41.7
ATR0582G207 Amborella trichopoda HOM05D003304 ORTHO05D003762 9.0e-09 65.1 241 29.5
HPP92_023378 Vanilla planifolia HOM05D003304 ORTHO05D003762 9.0e-09 65.1 306 26.8
Aa31sc105G60 Aethionema arabicum HOM05D003304 ORTHO05D003762 1.2e-08 64.7 78 50.0
Thhalv10004314m.g Eutrema salsugineum HOM05D003304 ORTHO05D003762 1.2e-08 64.7 78 47.4
Os02g0526700 Oryza sativa ssp. japonica HOM05D003304 ORTHO05D003762 2.6e-08 63.5 45 68.9
CANSAT78G0081 Cannabis sativa HOM05D003304 ORTHO05D003762 3.4e-08 63.2 57 59.6
Ca_21485_v3 Cicer arietinum L. HOM05D003304 ORTHO05D003762 3.4e-08 63.2 202 30.2
Lalb_Chr18g0051571 Lupinus albus HOM05D003304 ORTHO05D003762 5.8e-08 62.4 80 46.2
THA.LOC104803101 Tarenaya hassleriana HOM05D003304 ORTHO05D003762 5.8e-08 62.4 48 64.6
arahy.Tifrunner.gnm1.ann1.8XU14N Arachis hypogaea HOM05D003304 ORTHO05D003762 7.6e-08 62.0 288 34.0
EL10Ac3g06624 Beta vulgaris HOM05D003304 ORTHO05D003762 1.0e-07 61.6 77 48.1
Migut.G00140 Erythranthe guttata HOM05D003304 ORTHO05D003762 1.0e-07 61.6 37 75.7
Medtr4g120050 Medicago truncatula HOM05D003304 ORTHO05D003762 1.0e-07 61.6 294 26.9
Zm00001eb242460 Zea mays HOM05D003304 ORTHO05D003762 1.0e-07 61.6 52 57.7
C07p39670 Brassica napus HOM05D003304 ORTHO05D003762 1.3e-07 61.2 258 31.0
vmacro08170 Vaccinium macrocarpon HOM05D003304 ORTHO05D003762 1.3e-07 61.2 290 28.3
BcaC03g17699 Brassica carinata HOM05D003304 ORTHO05D003762 1.7e-07 60.8 75 50.7
TPR.G3216 Trifolium pratense HOM05D003304 ORTHO05D003762 1.7e-07 60.8 44 68.2
arahy.Tifrunner.gnm1.ann1.IWFQ27 Arachis hypogaea HOM05D003304 ORTHO05D003762 2.9e-07 60.1 69 55.1
CSS0031454 Camellia sinensis var. sinensis HOM05D003304 ORTHO05D003762 1.1e-06 58.2 38 73.7
Nitab4.5_0004498g0020 Nicotiana tabacum HOM05D003304 ORTHO05D003762 3.2e-06 56.6 113 41.6
unitig_748.g8726 Utricularia gibba HOM05D003304 ORTHO05D003762 5.5e-06 55.8 38 71.1


User provided reference genes

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