Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030505 Daucus carota HOM05D005204 ORTHO05D006037 0.0e+00 1242.6 628 100.0
Rhsim02G0007000 Rhododendron simsii HOM05D005204 ORTHO05D006037 3.5e-147 526.2 645 49.8
Hma1.2p1_0078F.1_g040360 Hydrangea macrophylla HOM05D005204 ORTHO05D006037 1.0e-146 524.6 639 50.5
Oeu016254.2 Olea europaea HOM05D005204 ORTHO05D006037 1.9e-145 520.4 677 46.5
Duzib052G0651 Durio zibethinus HOM05D005204 ORTHO05D006037 4.9e-141 505.8 649 48.1
vmacro15212 Vaccinium macrocarpon HOM05D005204 ORTHO05D006037 1.4e-140 504.2 656 47.9
CSS0048761 Camellia sinensis var. sinensis HOM05D005204 ORTHO05D006037 7.9e-139 498.4 650 46.9
COL.COLO4_13824 Corchorus olitorius HOM05D005204 ORTHO05D006037 2.3e-138 496.9 648 46.8
ECA246G1739 Erigeron canadensis HOM05D005204 ORTHO05D006037 1.5e-137 494.2 639 45.4
Oeu031982.1 Olea europaea HOM05D005204 ORTHO05D006037 1.9e-137 493.8 673 46.7
Thecc.04G288800 Theobroma cacao HOM05D005204 ORTHO05D006037 9.6e-137 491.5 651 47.3
QL06p010355 Quercus lobata HOM05D005204 ORTHO05D006037 8.1e-136 488.4 648 47.4
TAR633G1027 Trochodendron aralioides HOM05D005204 ORTHO05D006037 2.4e-135 486.9 640 45.9
Sopen12g034090 Solanum pennellii HOM05D005204 ORTHO05D006037 6.9e-135 485.3 635 47.1
Solyc12g099420.2 Solanum lycopersicum HOM05D005204 ORTHO05D006037 9.0e-135 485.0 645 46.8
Peaxi162Scf00646g00324 Petunia axillaris HOM05D005204 ORTHO05D006037 1.5e-134 484.2 620 47.9
Ciclev10004466m.g Citrus clementina HOM05D005204 ORTHO05D006037 7.6e-134 481.9 628 47.0
arahy.Tifrunner.gnm1.ann1.02VXE5 Arachis hypogaea HOM05D005204 ORTHO05D006037 3.2e-132 476.5 631 46.4
RcHm_v2.0_Chr4g0423341 Rosa chinensis HOM05D005204 ORTHO05D006037 3.2e-132 476.5 624 47.8
CiPaw.02G079900 Carya illinoinensis HOM05D005204 ORTHO05D006037 5.5e-132 475.7 638 47.6
FvH4_4g18640 Fragaria vesca HOM05D005204 ORTHO05D006037 9.3e-132 474.9 622 46.8
HanXRQChr06g0173751 Helianthus annuus HOM05D005204 ORTHO05D006037 1.6e-131 474.2 636 45.8
Actinidia14280 Actinidia chinensis HOM05D005204 ORTHO05D006037 2.1e-131 473.8 605 48.1
arahy.Tifrunner.gnm1.ann1.J2HRGN Arachis hypogaea HOM05D005204 ORTHO05D006037 3.5e-131 473.0 638 45.6
CAN.G484.49 Capsicum annuum HOM05D005204 ORTHO05D006037 4.6e-131 472.6 641 46.8
PGSC0003DMG400004628 Solanum tuberosum HOM05D005204 ORTHO05D006037 4.6e-131 472.6 661 45.8
Atru.chr4.2898 Acer truncatum HOM05D005204 ORTHO05D006037 6.0e-131 472.2 650 45.4
Migut.N00079 Erythranthe guttata HOM05D005204 ORTHO05D006037 1.3e-130 471.1 645 45.7
FAN12G0364 Fragaria x ananassa HOM05D005204 ORTHO05D006037 1.3e-130 471.1 622 46.9
Nn1g01973 Nelumbo nucifera HOM05D005204 ORTHO05D006037 1.3e-130 471.1 641 44.9
FAN17G1530 Fragaria x ananassa HOM05D005204 ORTHO05D006037 8.7e-130 468.4 629 46.4
MBI18_g25094_MAGBIO Magnolia biondii HOM05D005204 ORTHO05D006037 1.1e-129 468.0 631 46.6
Potri.008G219100 Populus trichocarpa HOM05D005204 ORTHO05D006037 1.1e-129 468.0 639 45.1
FAN12G3005 Fragaria x ananassa HOM05D005204 ORTHO05D006037 2.5e-129 466.8 639 46.0
Cfa015426 Carpinus fangiana HOM05D005204 ORTHO05D006037 4.3e-129 466.1 636 46.1
DCAR_023300 Daucus carota HOM05D005204 ORTHO05D006037 7.4e-129 465.3 637 46.8
Prupe.1G123900 Prunus persica HOM05D005204 ORTHO05D006037 1.6e-128 464.2 635 45.4
Nitab4.5_0003767g0030 Nicotiana tabacum HOM05D005204 ORTHO05D006037 2.4e-127 460.3 648 45.4
Sabra08G0151500 Salix brachista HOM05D005204 ORTHO05D006037 3.1e-127 459.9 640 44.2
Gohir.A02G050800 Gossypium hirsutum HOM05D005204 ORTHO05D006037 9.0e-127 458.4 649 44.7
Lalb_Chr20g0117381 Lupinus albus HOM05D005204 ORTHO05D006037 2.0e-126 457.2 649 44.2
Lj6g0026338 Lotus japonicus HOM05D005204 ORTHO05D006037 2.6e-126 456.8 651 45.8
Ca_01912_v3 Cicer arietinum L. HOM05D005204 ORTHO05D006037 1.7e-125 454.1 653 44.0
FAN07G2681 Fragaria x ananassa HOM05D005204 ORTHO05D006037 1.7e-125 454.1 639 45.5
Gohir.D02G055700 Gossypium hirsutum HOM05D005204 ORTHO05D006037 1.7e-125 454.1 649 45.0
Potri.010G010480 Populus trichocarpa HOM05D005204 ORTHO05D006037 1.7e-125 454.1 647 46.5
SGA_v2.0_scaffold428G51532 Striga asiatica HOM05D005204 ORTHO05D006037 2.2e-125 453.8 657 45.4
Psat1g155920 Pisum sativum HOM05D005204 ORTHO05D006037 1.1e-124 451.4 649 43.8
Peaxi162Scf00065g01219 Petunia axillaris HOM05D005204 ORTHO05D006037 1.4e-124 451.1 649 44.7
Lj6A680G91 Lonicera japonica HOM05D005204 ORTHO05D006037 1.2e-123 448.0 533 51.6
SalBow5G0318 Salvia bowleyana HOM05D005204 ORTHO05D006037 1.2e-123 448.0 644 44.9
TPR.G28067 Trifolium pratense HOM05D005204 ORTHO05D006037 2.1e-123 447.2 627 44.5
Sc13g0003240 Simmondsia chinensis HOM05D005204 ORTHO05D006037 3.5e-123 446.4 628 43.6
Gorai.005G061700 Gossypium raimondii HOM05D005204 ORTHO05D006037 6.0e-123 445.7 649 44.5
MSTRG.24802 Avicennia marina HOM05D005204 ORTHO05D006037 7.9e-123 445.3 640 44.8
Lalb_Chr18g0054391 Lupinus albus HOM05D005204 ORTHO05D006037 1.3e-122 444.5 633 44.1
Sabra10G0006400 Salix brachista HOM05D005204 ORTHO05D006037 1.8e-122 444.1 648 45.5
TWI73G0558 Tripterygium wilfordii HOM05D005204 ORTHO05D006037 3.0e-122 443.4 639 46.2
Manes.03G200100 Manihot esculenta HOM05D005204 ORTHO05D006037 1.1e-121 441.4 630 43.8
Nitab4.5_0000695g0090 Nicotiana tabacum HOM05D005204 ORTHO05D006037 1.9e-121 440.7 651 44.1
MD16G1164600 Malus domestica HOM05D005204 ORTHO05D006037 2.5e-121 440.3 635 43.5
Glyma.09G042300 Glycine max HOM05D005204 ORTHO05D006037 1.6e-120 437.6 637 44.7
Aqoxy5G00784 Aquilegia oxysepala HOM05D005204 ORTHO05D006037 3.7e-120 436.4 646 43.2
MELO3C010685.2 Cucumis melo HOM05D005204 ORTHO05D006037 3.7e-120 436.4 608 44.2
BcaC05g28856 Brassica carinata HOM05D005204 ORTHO05D006037 3.1e-119 433.3 633 43.9
Cpa.g.sc50.164 Carica papaya HOM05D005204 ORTHO05D006037 3.1e-119 433.3 644 43.8
Medtr2g436080 Medicago truncatula HOM05D005204 ORTHO05D006037 3.1e-119 433.3 630 44.6
Cc03_g01540 Coffea canephora HOM05D005204 ORTHO05D006037 1.2e-118 431.4 690 44.2
Sed0015514 Sechium edule HOM05D005204 ORTHO05D006037 1.5e-118 431.0 650 44.0
MD13G1164900 Malus domestica HOM05D005204 ORTHO05D006037 3.4e-118 429.9 645 44.3
EL10Ac3g06651 Beta vulgaris HOM05D005204 ORTHO05D006037 5.9e-118 429.1 639 44.1
C05p49580 Brassica napus HOM05D005204 ORTHO05D006037 5.9e-118 429.1 634 43.8
Lsat_1_v5_gn_3_21680 Lactuca sativa HOM05D005204 ORTHO05D006037 5.9e-118 429.1 643 42.8
Carub.0003s1646 Capsella rubella HOM05D005204 ORTHO05D006037 1.0e-117 428.3 630 44.0
VMungo1309G0885 Vigna mungo HOM05D005204 ORTHO05D006037 1.0e-117 428.3 636 44.8
AT3G16730 Arabidopsis thaliana HOM05D005204 ORTHO05D006037 2.2e-117 427.2 631 44.4
Glyma.15G150700 Glycine max HOM05D005204 ORTHO05D006037 5.0e-117 426.0 638 43.9
Hund20528 Selenicereus undatus HOM05D005204 ORTHO05D006037 5.0e-117 426.0 646 43.5
PSO832G0069 Papaver somniferum HOM05D005204 ORTHO05D006037 8.5e-117 425.2 639 42.9
BolC5t33716H Brassica oleracea HOM05D005204 ORTHO05D006037 1.9e-116 424.1 633 43.6
PGR004G0276 Punica granatum HOM05D005204 ORTHO05D006037 1.9e-116 424.1 634 42.6
AL3G29660 Arabidopsis lyrata HOM05D005204 ORTHO05D006037 2.5e-116 423.7 634 44.5
A05p32870 Brassica napus HOM05D005204 ORTHO05D006037 2.5e-116 423.7 636 43.4
BraA05t22110Z Brassica rapa HOM05D005204 ORTHO05D006037 7.2e-116 422.2 636 43.4
Nitab4.5_0000570g0320 Nicotiana tabacum HOM05D005204 ORTHO05D006037 7.2e-116 422.2 648 44.6
BcaB06g25769 Brassica carinata HOM05D005204 ORTHO05D006037 2.1e-115 420.6 635 43.6
Thhalv10020220m.g Eutrema salsugineum HOM05D005204 ORTHO05D006037 2.3e-114 417.2 630 42.7
Phvul.009G250500 Phaseolus vulgaris HOM05D005204 ORTHO05D006037 2.3e-114 417.2 628 43.0
ClCG08G017750 Citrullus lanatus HOM05D005204 ORTHO05D006037 3.9e-114 416.4 638 43.4
THA.LOC104820287 Tarenaya hassleriana HOM05D005204 ORTHO05D006037 3.9e-114 416.4 647 42.7
Nitab4.5_0003484g0040 Nicotiana tabacum HOM05D005204 ORTHO05D006037 1.1e-113 414.8 636 44.0
Eucgr.H03961 Eucalyptus grandis HOM05D005204 ORTHO05D006037 1.5e-113 414.5 640 43.3
PSO210G5425 Papaver somniferum HOM05D005204 ORTHO05D006037 1.3e-112 411.4 656 41.6
A01p37560 Brassica napus HOM05D005204 ORTHO05D006037 4.8e-112 409.5 632 44.8
GSVIVG01035108001 Vitis vinifera HOM05D005204 ORTHO05D006037 4.8e-112 409.5 675 43.3
BraA01t03817Z Brassica rapa HOM05D005204 ORTHO05D006037 2.4e-111 407.1 628 44.6
Haze_01167 Corylus avellana HOM05D005204 ORTHO05D006037 5.3e-111 406.0 797 37.3
Sp3g15000 Schrenkiella parvula HOM05D005204 ORTHO05D006037 9.1e-111 405.2 644 43.9
Aa31LG8G3820 Aethionema arabicum HOM05D005204 ORTHO05D006037 2.0e-110 404.1 630 42.5
BolC1t04731H Brassica oleracea HOM05D005204 ORTHO05D006037 1.0e-109 401.7 634 43.5
Manes.03G198500 Manihot esculenta HOM05D005204 ORTHO05D006037 2.2e-109 400.6 610 41.8
BcaC09g48627 Brassica carinata HOM05D005204 ORTHO05D006037 1.1e-108 398.3 623 44.5
C01p47610 Brassica napus HOM05D005204 ORTHO05D006037 1.1e-108 398.3 624 44.6
CsaV3_2G024870 Cucumis sativus L. HOM05D005204 ORTHO05D006037 1.1e-108 398.3 631 42.2
CsaV3_7G000690 Cucumis sativus L. HOM05D005204 ORTHO05D006037 1.9e-108 397.5 621 41.2
HPP92_012404 Vanilla planifolia HOM05D005204 ORTHO05D006037 3.9e-106 389.8 628 41.1
ATR0693G386 Amborella trichopoda HOM05D005204 ORTHO05D006037 1.1e-105 388.3 607 42.3
Dinv29726 Davidia involucrata HOM05D005204 ORTHO05D006037 3.3e-105 386.7 522 46.6
AUR62015273 Chenopodium quinoa HOM05D005204 ORTHO05D006037 5.3e-103 379.4 625 40.5
AUR62018070 Chenopodium quinoa HOM05D005204 ORTHO05D006037 3.6e-99 366.7 664 39.0
Ah.04g153660 Amaranthus hybridus HOM05D005204 ORTHO05D006037 2.2e-93 347.4 637 40.3
Zm00001eb322750 Zea mays HOM05D005204 ORTHO05D006037 5.5e-92 342.8 663 38.3
SHI00244 Sapria himalayana HOM05D005204 ORTHO05D006037 2.7e-91 340.5 700 36.9
CDE05G2961 Ceratophyllum demersum HOM05D005204 ORTHO05D006037 5.2e-90 336.3 619 36.8
SEGI_08509 Sequoiadendron giganteum HOM05D005204 ORTHO05D006037 2.1e-83 314.3 669 35.0
Os07g0517300 Oryza sativa ssp. japonica HOM05D005204 ORTHO05D006037 3.3e-76 290.4 631 36.8
Nn3g19294 Nelumbo nucifera HOM05D005204 ORTHO05D006037 6.1e-75 286.2 606 34.8
TAR362G0889 Trochodendron aralioides HOM05D005204 ORTHO05D006037 1.6e-70 271.6 499 38.9
CARHR091990 Cardamine hirsuta HOM05D005204 ORTHO05D006037 2.3e-69 267.7 446 41.5
SMO367G0335 Selaginella moellendorffii HOM05D005204 ORTHO05D006037 8.9e-66 255.8 617 34.2
Mapoly0137s0008 Marchantia polymorpha HOM05D005204 ORTHO05D006037 1.3e-64 251.9 680 33.2
Zm00001eb106060 Zea mays HOM05D005204 ORTHO05D006037 1.4e-58 231.9 497 35.4
unitig_749.g14080 Utricularia gibba HOM05D005204 ORTHO05D006037 1.7e-53 214.9 609 29.4
AagrBONN_evm.TU.Sc2ySwM_340.303 Anthoceros agrestis HOM05D005204 ORTHO05D006037 1.7e-37 161.8 497 30.0
TAR624G0487 Trochodendron aralioides HOM05D005204 ORTHO05D006037 2.5e-36 157.9 338 33.4
Dinv44351 Davidia involucrata HOM05D005204 ORTHO05D006037 3.3e-36 157.5 589 27.3
CARHR091980 Cardamine hirsuta HOM05D005204 ORTHO05D006037 4.8e-35 153.7 189 45.5
CBR_g38039 Chara braunii HOM05D005204 ORTHO05D006037 2.2e-32 144.8 722 29.4
Actinidia13388 Actinidia chinensis HOM05D005204 ORTHO05D006037 1.1e-31 142.5 176 44.9
ATR0693G078 Amborella trichopoda HOM05D005204 ORTHO05D006037 1.2e-30 139.0 152 50.0
TAR624G0737 Trochodendron aralioides HOM05D005204 ORTHO05D006037 3.8e-24 117.5 187 40.1
Dinv29725 Davidia involucrata HOM05D005204 ORTHO05D006037 1.9e-23 115.2 98 59.2
DCAR_031703 Daucus carota HOM05D005204 ORTHO05D006037 1.0e-21 109.4 111 49.5
PGR004G0772 Punica granatum HOM05D005204 ORTHO05D006037 1.0e-16 92.8 137 39.4
PRCOL_00000998 Prasinoderma coloniale HOM05D005204 ORTHO05D006037 3.2e-15 87.8 712 21.8
Manes.17G118669 Manihot esculenta HOM05D005204 ORTHO05D006037 1.8e-13 82.0 141 39.0
Cre09.g408900 Chlamydomonas reinhardtii HOM05D005204 ORTHO05D006037 1.5e-09 68.9 240 28.8
Zm00001eb139240 Zea mays HOM05D001287 ORTHO05D006037 2.6e-09 68.2 100 39.0


User provided reference genes

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