Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030447 Daucus carota HOM05D004450 ORTHO05D005491 3.2e-139 498.4 257 100.0
DCAR_008706 Daucus carota HOM05D004450 ORTHO05D005491 3.5e-85 318.9 221 76.5
Dinv44730 Davidia involucrata HOM05D004450 ORTHO05D005491 1.7e-31 140.6 217 41.9
Dinv13057 Davidia involucrata HOM05D004450 ORTHO05D005491 2.2e-26 123.6 233 36.9
Cc10_g05930 Coffea canephora HOM05D004450 ORTHO05D005491 1.8e-25 120.6 211 35.5
Actinidia10290 Actinidia chinensis HOM05D004450 ORTHO05D005491 1.5e-24 117.5 196 38.3
Potri.005G170066 Populus trichocarpa HOM05D004450 ORTHO05D005491 1.5e-24 117.5 230 36.1
Sabra05G0127500 Salix brachista HOM05D004450 ORTHO05D005491 4.5e-24 115.9 232 33.6
MD08G1176200 Malus domestica HOM05D004450 ORTHO05D005491 1.4e-22 110.9 233 33.9
Prupe.1G510000 Prunus persica HOM05D004450 ORTHO05D005491 4.2e-22 109.4 232 32.8
Nn5g28982 Nelumbo nucifera HOM05D004450 ORTHO05D005491 5.5e-22 109.0 257 31.9
Manes.18G071100 Manihot esculenta HOM05D004450 ORTHO05D005491 9.4e-22 108.2 218 33.9
Cfa015933 Carpinus fangiana HOM05D004450 ORTHO05D005491 1.6e-21 107.5 217 36.9
TAR628G1211 Trochodendron aralioides HOM05D004450 ORTHO05D005491 2.7e-21 106.7 199 35.2
Haze_00557 Corylus avellana HOM05D004450 ORTHO05D005491 3.6e-21 106.3 217 36.9
Sabra02G0072500 Salix brachista HOM05D004450 ORTHO05D005491 3.6e-21 106.3 238 35.7
Sed0020591 Sechium edule HOM05D004450 ORTHO05D005491 1.0e-20 104.8 254 29.9
MD15G1361900 Malus domestica HOM05D004450 ORTHO05D005491 1.4e-20 104.4 214 32.7
Potri.002G091700 Populus trichocarpa HOM05D004450 ORTHO05D005491 5.1e-20 102.4 232 34.1
MELO3C022819.2 Cucumis melo HOM05D004450 ORTHO05D005491 2.0e-19 100.5 227 29.1
Thecc.08G113700 Theobroma cacao HOM05D004450 ORTHO05D005491 2.6e-19 100.1 194 36.6
Atru.chr13.1280 Acer truncatum HOM05D004450 ORTHO05D005491 4.4e-19 99.4 218 34.9
Manes.02G157000 Manihot esculenta HOM05D004450 ORTHO05D005491 5.7e-19 99.0 187 38.5
PGR042G3086 Punica granatum HOM05D004450 ORTHO05D005491 9.7e-19 98.2 191 36.6
Duzib093G0537 Durio zibethinus HOM05D004450 ORTHO05D005491 1.3e-18 97.8 226 32.7
Peaxi162Scf00168g00521 Petunia axillaris HOM05D004450 ORTHO05D005491 4.8e-18 95.9 200 32.5
Gohir.A06G039400 Gossypium hirsutum HOM05D004450 ORTHO05D005491 3.1e-17 93.2 225 32.9
RcHm_v2.0_Chr7g0240181 Rosa chinensis HOM05D004450 ORTHO05D005491 3.1e-17 93.2 201 34.8
Cpa.g.sc66.104 Carica papaya HOM05D004450 ORTHO05D005491 5.3e-17 92.4 229 31.9
Gohir.D06G040400 Gossypium hirsutum HOM05D004450 ORTHO05D005491 5.3e-17 92.4 225 32.9
Gorai.010G042800 Gossypium raimondii HOM05D004450 ORTHO05D005491 9.1e-17 91.7 224 32.6
CsaV3_5G023850 Cucumis sativus L. HOM05D004450 ORTHO05D005491 2.0e-16 90.5 227 27.3
Lj4C711G4 Lonicera japonica HOM05D004450 ORTHO05D005491 4.5e-16 89.4 250 30.8
MBI02_g37828_MAGBIO Magnolia biondii HOM05D004450 ORTHO05D005491 4.5e-16 89.4 238 28.2
CSS0047020 Camellia sinensis var. sinensis HOM05D004450 ORTHO05D005491 1.0e-15 88.2 219 30.6
PSO675G2430 Papaver somniferum HOM05D004450 ORTHO05D005491 1.3e-15 87.8 214 29.4
Solyc04g072630.4 Solanum lycopersicum HOM05D004450 ORTHO05D005491 1.7e-15 87.4 179 35.2
Sopen04g028830 Solanum pennellii HOM05D004450 ORTHO05D005491 2.9e-15 86.7 179 34.6
CANSAT25G3861 Cannabis sativa HOM05D004450 ORTHO05D005491 3.8e-15 86.3 206 31.6
ClCG03G008890 Citrullus lanatus HOM05D004450 ORTHO05D005491 6.5e-15 85.5 227 27.8
PSO541G1294 Papaver somniferum HOM05D004450 ORTHO05D005491 1.1e-14 84.7 182 30.2
CSS0015865 Camellia sinensis var. sinensis HOM05D004450 ORTHO05D005491 1.4e-14 84.3 200 30.5
Gorai.010G045100 Gossypium raimondii HOM05D004450 ORTHO05D005491 1.9e-14 84.0 207 32.9
Nitab4.5_0002534g0010 Nicotiana tabacum HOM05D004450 ORTHO05D005491 2.5e-14 83.6 211 31.8
Gohir.D02G082600 Gossypium hirsutum HOM05D004450 ORTHO05D005491 5.5e-14 82.4 209 32.1
Gorai.005G092600 Gossypium raimondii HOM05D004450 ORTHO05D005491 7.2e-14 82.0 209 32.1
QL12p035690 Quercus lobata HOM05D004450 ORTHO05D005491 7.2e-14 82.0 144 38.9
SalBow7G0866 Salvia bowleyana HOM05D004450 ORTHO05D005491 9.4e-14 81.6 248 29.4
Aqoxy6G00526 Aquilegia oxysepala HOM05D004450 ORTHO05D005491 1.2e-13 81.3 206 29.1
Nitab4.5_0004450g0020 Nicotiana tabacum HOM05D004450 ORTHO05D005491 1.2e-13 81.3 211 31.3
Ciclev10003301m.g Citrus clementina HOM05D004450 ORTHO05D005491 1.6e-13 80.9 201 32.3
SGA_v2.0_scaffold48G18010 Striga asiatica HOM05D004450 ORTHO05D005491 2.1e-13 80.5 207 33.8
FAN04G1322 Fragaria x ananassa HOM05D004450 ORTHO05D005491 2.7e-13 80.1 153 34.6
FAN18G0908 Fragaria x ananassa HOM05D004450 ORTHO05D005491 5.2e-12 75.9 171 34.5
FAN13G1849 Fragaria x ananassa HOM05D004450 ORTHO05D005491 6.7e-12 75.5 130 36.9
Rhsim06G0086600 Rhododendron simsii HOM05D004450 ORTHO05D005491 2.6e-11 73.6 145 35.9
Thhalv10006527m.g Eutrema salsugineum HOM05D004450 ORTHO05D005491 4.4e-11 72.8 183 32.8
FvH4_5g38230 Fragaria vesca HOM05D004450 ORTHO05D005491 4.4e-11 72.8 153 33.3
FAN08G3465 Fragaria x ananassa HOM05D004450 ORTHO05D005491 4.4e-11 72.8 153 33.3
Carub.0001s2161 Capsella rubella HOM05D004450 ORTHO05D005491 7.4e-11 72.0 206 29.6
A09p42700 Brassica napus HOM05D004450 ORTHO05D005491 9.7e-11 71.6 211 28.9
BraA09t39746Z Brassica rapa HOM05D004450 ORTHO05D005491 9.7e-11 71.6 211 28.9
CiPaw.05G231800 Carya illinoinensis HOM05D004450 ORTHO05D005491 9.7e-11 71.6 231 27.7
BcaB07g32225 Brassica carinata HOM05D004450 ORTHO05D005491 1.3e-10 71.2 197 29.9
AUR62034367 Chenopodium quinoa HOM05D004450 ORTHO05D005491 1.3e-10 71.2 211 28.0
Sp1g19560 Schrenkiella parvula HOM05D004450 ORTHO05D005491 1.7e-10 70.9 213 31.0
THA.LOC104800171 Tarenaya hassleriana HOM05D004450 ORTHO05D005491 2.2e-10 70.5 209 31.6
AT1G22060 Arabidopsis thaliana HOM05D004450 ORTHO05D005491 3.7e-10 69.7 213 29.6
C05p21090 Brassica napus HOM05D004450 ORTHO05D005491 3.7e-10 69.7 210 28.6
Oeu024568.7 Olea europaea HOM05D004450 ORTHO05D005491 4.8e-10 69.3 232 29.7
Aa31LG7G6050 Aethionema arabicum HOM05D004450 ORTHO05D005491 6.3e-10 68.9 166 32.5
Medtr3g073620 Medicago truncatula HOM05D004450 ORTHO05D005491 6.3e-10 68.9 229 29.3
BcaC05g26132 Brassica carinata HOM05D004450 ORTHO05D005491 1.1e-09 68.2 210 28.1
Psat5g136520 Pisum sativum HOM05D004450 ORTHO05D005491 1.4e-09 67.8 225 27.1
VMungo1309G1299 Vigna mungo HOM05D004450 ORTHO05D005491 1.4e-09 67.8 252 25.4
TWI36G0771 Tripterygium wilfordii HOM05D004450 ORTHO05D005491 2.4e-09 67.0 214 27.6
vmacro21221 Vaccinium macrocarpon HOM05D004450 ORTHO05D005491 2.4e-09 67.0 132 34.8
Eucgr.H00921 Eucalyptus grandis HOM05D004450 ORTHO05D005491 7.0e-09 65.5 155 32.9
Ca_26313_v3 Cicer arietinum L. HOM05D004450 ORTHO05D005491 9.1e-09 65.1 259 25.9
MBI05_g36570_MAGBIO Magnolia biondii HOM05D004450 ORTHO05D005491 9.1e-09 65.1 161 29.8
Hund26655 Selenicereus undatus HOM05D004450 ORTHO05D005491 1.6e-08 64.3 169 29.6
BolC5t30807H Brassica oleracea HOM05D004450 ORTHO05D005491 2.0e-08 63.9 208 27.9
Lalb_Chr08g0241811 Lupinus albus HOM05D004450 ORTHO05D005491 2.6e-08 63.5 213 28.6
Sc20g0003030 Simmondsia chinensis HOM05D004450 ORTHO05D005491 5.9e-08 62.4 167 28.1
AL1G35490 Arabidopsis lyrata HOM05D004450 ORTHO05D005491 7.7e-08 62.0 183 30.6
EL10Ac1g01695 Beta vulgaris HOM05D004450 ORTHO05D005491 7.7e-08 62.0 213 28.2
Phvul.009G027200 Phaseolus vulgaris HOM05D004450 ORTHO05D005491 7.7e-08 62.0 224 26.3
arahy.Tifrunner.gnm1.ann1.KN8WKR Arachis hypogaea HOM05D004450 ORTHO05D005491 1.1e-06 58.2 224 27.2
Lj1g0009455 Lotus japonicus HOM05D004450 ORTHO05D005491 1.1e-06 58.2 209 25.4
Psat0ss3186g0160 Pisum sativum HOM05D000564 ORTHO05D002780 1.5e-06 57.8 126 27.8
arahy.Tifrunner.gnm1.ann1.T35Q4E Arachis hypogaea HOM05D004450 ORTHO05D005491 3.2e-06 56.6 224 26.8
Glyma.04G107100 Glycine max HOM05D004450 ORTHO05D005491 5.5e-06 55.8 160 25.6
CARHR022410 Cardamine hirsuta HOM05D004450 ORTHO05D005491 7.2e-06 55.5 136 30.9


User provided reference genes

Program Settings