Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030436 Daucus carota HOM05D003146 ORTHO05D001819 1.2e-86 323.2 167 100.0
DCAR_030435 Daucus carota HOM05D003146 ORTHO05D001819 1.6e-75 286.2 166 87.3
DCAR_030437 Daucus carota HOM05D003146 ORTHO05D001819 3.3e-52 208.8 167 65.9
DCAR_030438 Daucus carota HOM05D003146 ORTHO05D001819 8.2e-27 124.4 168 44.0
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 5.2e-21 105.1 144 39.6
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.8e-18 96.7 147 36.1
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.9e-16 89.4 169 34.9
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 6.5e-16 88.2 104 45.2
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 6.5e-16 88.2 175 37.7
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 8.5e-16 87.8 150 34.7
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 8.5e-16 87.8 150 34.0
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.5e-15 87.0 151 35.8
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 9.4e-15 84.3 168 32.7
Peaxi162Scf00126g00017 Petunia axillaris HOM05D003146 ORTHO05D001819 9.4e-15 84.3 176 36.9
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.6e-14 83.6 170 33.5
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.7e-14 82.8 129 34.1
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-14 82.0 110 38.2
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 1.0e-13 80.9 176 35.2
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 1.8e-13 80.1 163 27.6
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 5.2e-13 78.6 115 35.7
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 6.7e-13 78.2 161 31.1
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.8e-13 77.8 126 32.5
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.2e-12 77.4 144 32.6
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 2.0e-12 76.6 148 32.4
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-12 76.3 131 31.3
Nitab4.5_0000035g0080 Nicotiana tabacum HOM05D003146 ORTHO05D001819 3.3e-12 75.9 133 35.3
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 3.3e-12 75.9 155 33.5
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 4.4e-12 75.5 172 29.7
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 4.4e-12 75.5 172 29.7
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 4.4e-12 75.5 172 29.7
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 4.4e-12 75.5 172 29.7
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 5.7e-12 75.1 172 29.7
SalBow3G4163 Salvia bowleyana HOM05D012147 ORTHO05D001819 7.5e-12 74.7 159 31.4
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 9.7e-12 74.3 148 31.1
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 9.7e-12 74.3 150 32.7
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 1.3e-11 73.9 148 32.4
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.3e-11 73.9 148 35.1
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 1.7e-11 73.6 153 30.7
Carub.0003s1698 Capsella rubella HOM05D003146 ORTHO05D001819 1.7e-11 73.6 133 33.8
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.7e-11 73.6 175 32.0
Actinidia28299 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.8e-11 72.8 82 45.1
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 2.8e-11 72.8 120 36.7
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 2.8e-11 72.8 120 36.7
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.7e-11 72.4 143 38.5
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.3e-11 71.6 132 30.3
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 8.2e-11 71.2 164 30.5
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.2e-11 71.2 178 30.3
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.2e-11 71.2 159 31.4
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 1.1e-10 70.9 173 29.5
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-10 70.9 158 31.0
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.4e-10 70.5 158 31.0
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 3.1e-10 69.3 164 31.1
Aa31LG8G4190 Aethionema arabicum HOM05D003146 ORTHO05D001819 4.1e-10 68.9 154 31.2
unitig_32.g11176 Utricularia gibba HOM05D012147 ORTHO05D001819 4.1e-10 68.9 160 32.5
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.0e-10 68.2 158 30.4
CAN.G338.40 Capsicum annuum HOM05D003146 ORTHO05D001819 1.2e-09 67.4 100 36.0
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 1.2e-09 67.4 171 28.1
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 2.0e-09 66.6 160 28.8
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.0e-09 66.6 151 30.5
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 3.5e-09 65.9 132 31.8
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 3.5e-09 65.9 126 31.7
Aa31LG10G5790 Aethionema arabicum HOM05D003146 ORTHO05D001819 5.9e-09 65.1 151 30.5
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 5.9e-09 65.1 170 27.1
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 7.7e-09 64.7 115 29.6
PGSC0003DMG400018189 Solanum tuberosum HOM05D003146 ORTHO05D001819 7.7e-09 64.7 98 36.7
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 1.0e-08 64.3 158 27.8
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 1.0e-08 64.3 140 26.4
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.7e-08 63.5 158 28.5
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 2.9e-08 62.8 110 32.7
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 8.5e-08 61.2 83 41.0
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.9e-07 60.1 117 31.6
Phvul.007G271650 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 2.5e-07 59.7 110 30.0
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 9.4e-07 57.8 144 26.4
CAN.G303.69 Capsicum annuum HOM05D003146 ORTHO05D001819 1.6e-06 57.0 84 36.9
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 2.7e-06 56.2 129 31.8
THA.LOC104802647 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.7e-06 56.2 175 27.4
Dinv22851 Davidia involucrata HOM05D009438 ORTHO05D010870 3.6e-06 55.8 170 27.1
Dinv22852 Davidia involucrata HOM05D009438 ORTHO05D010870 3.6e-06 55.8 170 27.1
Dinv22853 Davidia involucrata HOM05D009438 ORTHO05D010870 3.6e-06 55.8 170 27.1
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 4.7e-06 55.5 162 27.2
Dinv22850 Davidia involucrata HOM05D009438 ORTHO05D010870 4.7e-06 55.5 170 27.1
Dinv22854 Davidia involucrata HOM05D009438 ORTHO05D010870 4.7e-06 55.5 138 25.4
Thhalv10011818m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 4.7e-06 55.5 134 28.4
ATR0693G401 Amborella trichopoda HOM05D001445 ORTHO05D001261 6.1e-06 55.1 143 26.6
MBI19_g05147_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 8.0e-06 54.7 161 28.6


User provided reference genes

Program Settings