Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030435 Daucus carota HOM05D003146 ORTHO05D001819 2.7e-86 322.0 168 100.0
DCAR_030436 Daucus carota HOM05D003146 ORTHO05D001819 1.8e-74 282.7 166 87.3
DCAR_030437 Daucus carota HOM05D003146 ORTHO05D001819 3.3e-52 208.8 167 67.7
DCAR_030438 Daucus carota HOM05D003146 ORTHO05D001819 9.1e-26 120.9 168 43.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 9.4e-23 110.9 145 42.1
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.0e-20 103.2 149 37.6
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 3.4e-20 102.4 153 39.2
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 3.4e-20 102.4 153 38.6
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.3e-19 100.5 172 37.2
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 3.7e-19 99.0 170 35.9
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 3.7e-19 99.0 176 36.9
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 1.1e-18 97.4 153 37.9
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.2e-17 94.0 169 36.7
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 1.6e-17 93.6 173 34.1
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 3.5e-17 92.4 170 29.4
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.0e-16 90.9 125 43.2
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 8.6e-16 87.8 184 33.7
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 8.6e-16 87.8 145 35.9
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 8.6e-16 87.8 169 34.9
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.1e-15 87.4 149 37.6
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.5e-15 87.0 164 32.9
Peaxi162Scf00126g00017 Petunia axillaris HOM05D003146 ORTHO05D001819 3.3e-15 85.9 175 34.9
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 4.3e-15 85.5 167 36.5
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 2.1e-14 83.2 177 35.6
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.8e-14 82.8 164 28.0
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 2.8e-14 82.8 153 35.9
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.0e-14 81.3 164 29.3
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.0e-14 81.3 164 29.3
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-13 80.9 164 31.7
Nitab4.5_0000035g0080 Nicotiana tabacum HOM05D003146 ORTHO05D001819 1.0e-13 80.9 165 34.5
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-13 80.1 159 31.4
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.3e-13 79.7 177 33.9
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.0e-13 79.3 120 40.0
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.0e-13 79.3 120 40.0
PGSC0003DMG400018189 Solanum tuberosum HOM05D003146 ORTHO05D001819 4.0e-13 79.0 100 42.0
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.0e-13 79.0 180 31.7
Actinidia28299 Actinidia chinensis HOM05D003146 ORTHO05D001819 5.2e-13 78.6 82 50.0
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 6.8e-13 78.2 174 30.5
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 6.8e-13 78.2 174 30.5
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 6.8e-13 78.2 174 30.5
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 6.8e-13 78.2 174 30.5
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.8e-13 78.2 110 38.2
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 8.9e-13 77.8 174 30.5
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.9e-13 77.8 128 33.6
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 1.2e-12 77.4 174 30.5
Carub.0003s1698 Capsella rubella HOM05D003146 ORTHO05D001819 1.5e-12 77.0 160 31.9
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.5e-12 77.0 160 32.5
SalBow3G4163 Salvia bowleyana HOM05D012147 ORTHO05D001819 1.5e-12 77.0 160 31.9
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 2.0e-12 76.6 150 32.7
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 2.0e-12 76.6 171 31.0
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.0e-12 76.6 142 32.4
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-12 76.6 173 30.6
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.6e-12 76.3 134 33.6
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.4e-12 75.9 167 31.1
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.4e-12 75.9 165 30.9
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.4e-12 75.5 167 31.1
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 4.4e-12 75.5 167 30.5
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.4e-12 75.5 180 32.2
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 5.7e-12 75.1 160 31.9
CAN.G338.40 Capsicum annuum HOM05D003146 ORTHO05D001819 5.7e-12 75.1 98 38.8
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.5e-12 74.7 171 29.8
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-11 73.9 159 30.2
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-11 73.6 171 28.7
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 2.2e-11 73.2 172 29.7
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.2e-11 73.2 137 29.9
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 2.9e-11 72.8 160 30.6
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-11 72.8 161 28.0
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.9e-11 72.8 161 28.0
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.7e-11 72.4 167 29.9
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 3.7e-11 72.4 151 31.8
unitig_32.g11176 Utricularia gibba HOM05D012147 ORTHO05D001819 3.7e-11 72.4 165 33.9
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.9e-11 72.0 170 29.4
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.9e-11 72.0 165 30.3
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.4e-11 71.6 155 29.7
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.3e-11 71.2 172 29.7
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.3e-11 71.2 167 29.9
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 1.1e-10 70.9 130 36.9
Aa31LG8G4190 Aethionema arabicum HOM05D003146 ORTHO05D001819 1.8e-10 70.1 156 31.4
MELO3C027398.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.8e-10 70.1 170 27.6
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 1.8e-10 70.1 166 30.7
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 2.4e-10 69.7 172 28.5
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 3.2e-10 69.3 145 34.5
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.1e-10 68.9 162 30.9
Hma1.2p1_1096F.1_g256660 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 5.4e-10 68.6 143 34.3
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.4e-10 68.6 171 32.7
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.4e-10 68.6 175 32.0
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.0e-10 68.2 133 28.6
Rhsim04G0244200 Rhododendron simsii HOM05D003146 ORTHO05D001819 7.0e-10 68.2 182 30.8
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-10 67.8 134 31.3
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-10 67.8 134 31.3
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.2e-10 67.8 134 31.3
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-09 67.4 134 31.3
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-09 67.4 134 31.3
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-09 67.4 134 31.3
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-09 67.4 134 31.3
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-09 67.4 134 31.3
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.6e-09 67.0 174 29.9
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 2.7e-09 66.2 134 30.6
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.7e-09 66.2 165 26.7
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.7e-09 66.2 159 32.7
CAN.G303.69 Capsicum annuum HOM05D003146 ORTHO05D001819 5.9e-09 65.1 86 40.7
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 7.8e-09 64.7 160 28.8
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 1.0e-08 64.3 177 29.4
Aqoxy5G00783 Aquilegia oxysepala HOM05D003556 ORTHO05D003404 1.3e-08 63.9 119 34.5
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 3.0e-08 62.8 173 29.5
Migut.N02793 Erythranthe guttata HOM05D012147 ORTHO05D001819 3.9e-08 62.4 179 29.1
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 3.9e-08 62.4 127 28.3
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 6.6e-08 61.6 144 29.2
THA.LOC104802647 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 8.6e-08 61.2 163 30.1
CsaV3_6G020170 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.5e-07 60.5 117 29.1
unitig_32.g11178 Utricularia gibba HOM05D012147 ORTHO05D001819 1.5e-07 60.5 165 29.7
PGSC0003DMG400010932 Solanum tuberosum HOM05D014661 ORTHO05D018081 2.5e-07 59.7 156 26.3
Atru.chr4.3013 Acer truncatum HOM05D005742 ORTHO05D001888 3.3e-07 59.3 120 35.8
ATR0693G401 Amborella trichopoda HOM05D001445 ORTHO05D001261 3.3e-07 59.3 141 27.0
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 4.3e-07 58.9 163 30.7
PGSC0003DMG400010934 Solanum tuberosum HOM05D014661 ORTHO05D018081 4.3e-07 58.9 156 26.3
Dinv22854 Davidia involucrata HOM05D009438 ORTHO05D010870 5.6e-07 58.5 170 25.9
Phvul.007G271600 Phaseolus vulgaris HOM05D007995 ORTHO05D001819 5.6e-07 58.5 134 30.6
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 5.6e-07 58.5 147 27.2
ATR1149G037 Amborella trichopoda HOM05D003556 ORTHO05D003404 7.3e-07 58.2 159 32.1
CANSAT54G0162 Cannabis sativa HOM05D003556 ORTHO05D003404 7.3e-07 58.2 163 30.1
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 1.6e-06 57.0 141 27.7
Actinidia18154 Actinidia chinensis HOM05D009438 ORTHO05D010870 2.1e-06 56.6 142 27.5
Dinv22851 Davidia involucrata HOM05D009438 ORTHO05D010870 2.1e-06 56.6 170 26.5
Dinv22852 Davidia involucrata HOM05D009438 ORTHO05D010870 2.1e-06 56.6 170 26.5
Lalb_Chr16g0386201 Lupinus albus HOM05D007995 ORTHO05D001819 2.1e-06 56.6 172 29.7
Lalb_Chr16g0386221 Lupinus albus HOM05D007995 ORTHO05D001819 2.1e-06 56.6 172 29.7
QL04p005657 Quercus lobata HOM05D003146 ORTHO05D001819 2.1e-06 56.6 152 28.3
Aa31LG10G5710 Aethionema arabicum HOM05D008385 ORTHO05D010806 2.8e-06 56.2 113 32.7
Duzib052G0264 Durio zibethinus HOM05D005742 ORTHO05D001888 2.8e-06 56.2 158 28.5
MBI04_g03340_MAGBIO Magnolia biondii HOM05D001445 ORTHO05D001261 2.8e-06 56.2 121 32.2
Thecc.04G299300 Theobroma cacao HOM05D005742 ORTHO05D001888 2.8e-06 56.2 152 30.3
TAR362G0992 Trochodendron aralioides HOM05D003556 ORTHO05D003404 2.8e-06 56.2 151 28.5
VMungo0251G1280 Vigna mungo HOM05D001445 ORTHO05D001261 2.8e-06 56.2 105 31.4
Dinv22853 Davidia involucrata HOM05D009438 ORTHO05D010870 3.6e-06 55.8 120 27.5
PSO017G6871 Papaver somniferum HOM05D001445 ORTHO05D001261 3.6e-06 55.8 177 29.4
CDE10G0991 Ceratophyllum demersum HOM05D004050 ORTHO05D005162 4.7e-06 55.5 107 33.6
Duzib151G0239 Durio zibethinus HOM05D005742 ORTHO05D001888 4.7e-06 55.5 151 29.8
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 6.2e-06 55.1 144 25.7
COL.COLO4_30864 Corchorus olitorius HOM05D000036 ORTHO05D002265 6.2e-06 55.1 166 27.7
MELO3C030062.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.2e-06 55.1 107 32.7
TAR216G0004 Trochodendron aralioides HOM05D003556 ORTHO05D003404 6.2e-06 55.1 145 27.6
EL10Ac1g00256 Beta vulgaris HOM05D001445 ORTHO05D001261 8.0e-06 54.7 144 28.5
Carub.0008s0090 Capsella rubella HOM05D001445 ORTHO05D001261 8.0e-06 54.7 150 32.0
Lalb_Chr04g0256671 Lupinus albus HOM05D007995 ORTHO05D001819 8.0e-06 54.7 179 29.6


User provided reference genes

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