Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 2.6e-186 655.2 325 100.0
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 9.2e-99 364.4 330 58.5
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 1.7e-97 360.1 324 57.7
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 1.5e-96 357.1 329 54.7
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 1.6e-95 353.6 281 61.2
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.6e-95 353.6 325 56.6
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.1e-95 353.2 281 61.2
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.8e-95 352.8 328 57.6
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 3.6e-95 352.4 328 57.6
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.3e-94 349.7 328 57.0
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 2.3e-94 349.7 328 55.8
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 5.2e-94 348.6 326 55.5
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 6.8e-94 348.2 333 56.2
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.2e-93 347.4 286 59.1
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.0e-93 346.7 331 54.4
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 5.8e-93 345.1 331 55.3
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 7.5e-93 344.7 333 54.1
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.2e-92 343.2 334 54.2
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.2e-92 343.2 300 59.3
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 2.2e-92 343.2 300 59.3
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 2.9e-92 342.8 330 54.8
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 3.7e-92 342.4 329 55.0
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 4.9e-92 342.0 251 66.1
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 4.9e-92 342.0 279 60.6
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 1.1e-91 340.9 332 52.4
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 2.4e-91 339.7 341 54.5
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 2.4e-91 339.7 332 55.7
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 2.4e-91 339.7 271 64.2
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 2.4e-91 339.7 332 55.4
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 7.0e-91 338.2 329 54.1
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 1.6e-90 337.0 333 55.0
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 1.6e-90 337.0 260 62.7
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 3.5e-90 335.9 263 64.3
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 7.8e-90 334.7 274 63.1
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 3.0e-89 332.8 304 56.9
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.9e-89 332.4 327 55.0
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 5.0e-89 332.0 327 54.7
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.5e-88 329.7 308 57.1
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 1.2e-87 327.4 251 62.9
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 1.2e-87 327.4 251 62.9
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 1.6e-87 327.0 251 62.5
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.6e-87 327.0 251 64.5
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.6e-87 327.0 226 67.7
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 6.2e-87 325.1 256 62.9
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 6.2e-87 325.1 250 62.4
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 1.4e-86 323.9 253 63.2
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.4e-86 323.9 328 53.0
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.4e-86 323.9 255 62.4
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.8e-86 323.6 252 63.5
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.8e-86 323.6 328 53.0
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 4.0e-86 322.4 244 66.4
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 6.8e-86 321.6 335 53.7
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 8.9e-86 321.2 248 63.7
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 8.9e-86 321.2 276 58.3
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 1.5e-85 320.5 336 53.9
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 2.0e-85 320.1 256 62.5
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 5.8e-85 318.5 334 49.4
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 5.8e-85 318.5 332 49.7
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 9.8e-85 317.8 266 56.0
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 1.3e-84 317.4 272 58.5
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.3e-84 317.4 270 59.3
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.3e-84 317.4 287 57.8
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 1.7e-84 317.0 237 64.1
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 2.2e-84 316.6 248 61.7
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 6.4e-84 315.1 328 52.1
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 6.4e-84 315.1 287 57.5
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 8.3e-84 314.7 227 68.3
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 8.3e-84 314.7 252 62.7
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 8.3e-84 314.7 322 49.1
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.1e-83 314.3 322 53.4
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 1.4e-83 313.9 383 48.3
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 1.9e-83 313.5 329 49.5
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 7.1e-83 311.6 333 50.8
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 9.2e-83 311.2 249 61.4
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 9.2e-83 311.2 247 60.7
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.2e-82 310.8 334 53.0
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 2.7e-82 309.7 286 55.2
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 2.7e-82 309.7 258 59.3
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 4.6e-82 308.9 255 60.0
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.0e-81 307.8 233 65.7
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 2.3e-81 306.6 245 60.8
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 3.0e-81 306.2 254 59.1
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 3.9e-81 305.8 302 53.0
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.1e-80 304.3 234 62.8
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 2.5e-80 303.1 251 59.0
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 9.5e-80 301.2 300 51.7
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 1.6e-79 300.4 269 55.4
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 3.6e-79 299.3 311 52.7
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 6.2e-79 298.5 317 51.1
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.2e-77 294.3 329 49.8
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 3.4e-77 292.7 271 55.0
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 7.6e-77 291.6 244 61.9
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 1.3e-76 290.8 296 51.7
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.4e-75 287.3 215 67.4
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 1.9e-75 287.0 242 57.4
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.6e-71 273.9 228 55.3
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.4e-70 270.8 241 54.8
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 5.2e-70 268.9 244 56.1
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.3e-65 253.4 231 55.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 8.4e-60 235.0 162 68.5
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.2e-58 231.1 231 53.2
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 1.5e-53 214.2 219 52.1
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 5.8e-53 212.2 139 71.9
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 2.2e-52 210.3 319 40.8
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 3.2e-51 206.5 319 41.7
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 6.0e-50 202.2 158 65.2
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.1e-47 191.8 199 52.8
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 8.1e-47 191.8 305 39.3
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.2e-45 188.0 150 57.3
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 1.5e-45 187.6 232 42.7
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 2.2e-44 183.7 138 63.8
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 2.5e-43 180.3 138 64.5
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 7.1e-43 178.7 310 37.4
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.6e-42 177.6 138 65.9
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 2.4e-38 163.7 105 72.4
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.7e-36 157.5 134 56.0
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.4e-35 154.5 130 58.5
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 6.1e-34 149.1 133 53.4
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.1e-32 144.8 111 64.0
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 2.8e-31 140.2 113 61.9
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 2.7e-26 123.6 110 58.2
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 2.8e-23 113.6 175 40.6
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.6e-18 96.7 64 71.9
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 1.1e-11 75.1 74 56.8
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 1.9e-11 74.3 73 53.4


User provided reference genes

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