Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030377 Daucus carota HOM05D002652 ORTHO05D002739 1.7e-125 452.6 216 100.0
DCAR_030375 Daucus carota HOM05D002652 ORTHO05D002739 1.6e-91 339.7 166 95.8
DCAR_030376 Daucus carota HOM05D002652 ORTHO05D002739 2.1e-67 259.6 197 64.0
DCAR_030374 Daucus carota HOM05D002652 ORTHO05D002739 3.3e-52 209.1 154 66.9
DCAR_002581 Daucus carota HOM05D002652 ORTHO05D002739 4.1e-47 192.2 223 46.6
DCAR_002582 Daucus carota HOM05D002652 ORTHO05D002739 4.3e-28 129.0 140 48.6
Lsat_1_v5_gn_2_104120 Lactuca sativa HOM05D002652 ORTHO05D002739 4.3e-20 102.4 116 43.1
DCAR_030381 Daucus carota HOM05D002652 ORTHO05D002739 7.4e-20 101.7 95 50.5
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 7.4e-20 101.7 124 41.1
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 4.8e-19 99.0 193 32.6
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 6.2e-19 98.6 125 40.0
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 8.1e-19 98.2 123 38.2
ECA238G3361 Erigeron canadensis HOM05D000095 ORTHO05D002739 1.1e-18 97.8 124 38.7
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 1.1e-18 97.8 127 39.4
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 1.4e-18 97.4 123 38.2
Ciclev10005927m.g Citrus clementina HOM05D002652 ORTHO05D002739 4.0e-18 95.9 125 38.4
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 5.3e-18 95.5 124 35.5
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 2.0e-17 93.6 130 34.6
Oeu020135.1 Olea europaea HOM05D002652 ORTHO05D002739 4.5e-17 92.4 124 38.7
SalBow3G3644 Salvia bowleyana HOM05D002652 ORTHO05D002739 4.5e-17 92.4 123 35.8
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 5.8e-17 92.0 127 34.6
Lsat_1_v5_gn_2_105441 Lactuca sativa HOM05D002652 ORTHO05D002739 2.9e-16 89.7 125 36.0
MD05G1228500 Malus domestica HOM05D002652 ORTHO05D002739 2.9e-16 89.7 123 38.2
QL06p021327 Quercus lobata HOM05D002652 ORTHO05D002739 3.8e-16 89.4 124 36.3
QL08p018841 Quercus lobata HOM05D002652 ORTHO05D002739 4.9e-16 89.0 198 31.3
Oeu011207.1 Olea europaea HOM05D002652 ORTHO05D002739 6.5e-16 88.6 121 37.2
Oeu061866.1 Olea europaea HOM05D002652 ORTHO05D002739 6.5e-16 88.6 204 30.9
Thecc.04G266900 Theobroma cacao HOM05D002652 ORTHO05D002739 6.5e-16 88.6 124 36.3
Ciclev10007025m.g Citrus clementina HOM05D002652 ORTHO05D002739 2.5e-15 86.7 124 36.3
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 3.2e-15 86.3 124 37.1
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.2e-15 85.9 106 38.7
SalBow2G1631 Salvia bowleyana HOM05D002652 ORTHO05D002739 5.5e-15 85.5 124 35.5
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 7.1e-15 85.1 124 39.5
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 9.3e-15 84.7 105 40.0
CSS0031417 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 1.2e-14 84.3 112 35.7
Atru.chr4.1903 Acer truncatum HOM05D002652 ORTHO05D002739 2.1e-14 83.6 124 36.3
Duzib151G0998 Durio zibethinus HOM05D002652 ORTHO05D002739 2.1e-14 83.6 124 35.5
Rhsim02G0045100 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.7e-14 83.2 112 37.5
RhsimUnG0101000 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.5e-14 82.8 113 35.4
Hma1.2p1_0565F.1_g179480 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 4.6e-14 82.4 127 34.6
Migut.N00315 Erythranthe guttata HOM05D002652 ORTHO05D002739 7.9e-14 81.6 112 35.7
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.3e-13 80.9 125 35.2
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 2.3e-13 80.1 125 34.4
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 2.3e-13 80.1 125 34.4
Migut.G00567 Erythranthe guttata HOM05D002652 ORTHO05D002739 2.3e-13 80.1 180 31.7
BcaC04g21865 Brassica carinata HOM05D002652 ORTHO05D002739 3.0e-13 79.7 125 34.4
BolC9t55542H Brassica oleracea HOM05D002652 ORTHO05D002739 3.0e-13 79.7 125 34.4
Migut.N00313 Erythranthe guttata HOM05D002652 ORTHO05D002739 3.0e-13 79.7 124 32.3
QL06p021274 Quercus lobata HOM05D002652 ORTHO05D002739 3.0e-13 79.7 219 29.7
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.9e-13 79.3 98 36.7
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 5.1e-13 79.0 125 34.4
CiPaw.02G106000 Carya illinoinensis HOM05D002652 ORTHO05D002739 5.1e-13 79.0 123 35.8
Ciclev10007030m.g Citrus clementina HOM05D002652 ORTHO05D002739 5.1e-13 79.0 121 33.9
Rhsim02G0044800 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.1e-13 79.0 113 35.4
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 6.7e-13 78.6 117 35.9
RhsimUnG0195300 Rhododendron simsii HOM05D002652 ORTHO05D002739 6.7e-13 78.6 126 31.0
Sabra19G0038300 Salix brachista HOM05D002652 ORTHO05D002739 6.7e-13 78.6 126 33.3
Sabra19G0038800 Salix brachista HOM05D002652 ORTHO05D002739 6.7e-13 78.6 126 33.3
Oeu011205.1 Olea europaea HOM05D002652 ORTHO05D002739 8.7e-13 78.2 199 28.6
CSS0002481 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 1.1e-12 77.8 107 36.4
GSVIVG01027930001 Vitis vinifera HOM05D002652 ORTHO05D002739 1.1e-12 77.8 120 32.5
C09p26400 Brassica napus HOM05D002652 ORTHO05D002739 1.9e-12 77.0 125 34.4
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.9e-12 77.0 161 28.6
RcHm_v2.0_Chr5g0024661 Rosa chinensis HOM05D002652 ORTHO05D002739 1.9e-12 77.0 123 35.8
Duzib151G0030 Durio zibethinus HOM05D002652 ORTHO05D002739 2.5e-12 76.6 189 30.2
THA.LOC104821630 Tarenaya hassleriana HOM05D002652 ORTHO05D002739 2.5e-12 76.6 128 34.4
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 4.3e-12 75.9 161 28.6
Rhsim02G0046100 Rhododendron simsii HOM05D002652 ORTHO05D002739 4.3e-12 75.9 98 36.7
Duzib151G0943 Durio zibethinus HOM05D002652 ORTHO05D002739 5.7e-12 75.5 108 32.4
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 5.7e-12 75.5 124 33.1
Sabra19G0038700 Salix brachista HOM05D002652 ORTHO05D002739 5.7e-12 75.5 126 32.5
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 7.4e-12 75.1 124 29.0
Carub.0007s2911 Capsella rubella HOM05D002652 ORTHO05D002739 7.4e-12 75.1 124 32.3
SalBow2G2144 Salvia bowleyana HOM05D000062 ORTHO05D000043 9.6e-12 74.7 108 38.9
Actinidia11376 Actinidia chinensis HOM05D002652 ORTHO05D002739 1.3e-11 74.3 208 29.8
Nn1g00660 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.3e-11 74.3 127 33.1
Rhsim02G0047200 Rhododendron simsii HOM05D002652 ORTHO05D002739 1.3e-11 74.3 114 36.0
Potri.019G029000 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.6e-11 73.9 126 32.5
Sabra19G0038500 Salix brachista HOM05D002652 ORTHO05D002739 2.1e-11 73.6 126 31.7
Potri.019G026860 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.8e-11 73.2 126 31.0
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.8e-11 73.2 122 32.0
CARHR219080 Cardamine hirsuta HOM05D002652 ORTHO05D002739 3.7e-11 72.8 125 32.0
COL.COLO4_15902 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.7e-11 72.8 127 33.1
Dinv29797 Davidia involucrata HOM05D002652 ORTHO05D002739 3.7e-11 72.8 201 27.9
Prupe.1G050100 Prunus persica HOM05D002652 ORTHO05D002739 3.7e-11 72.8 109 33.0
Rhsim09G0015400 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.7e-11 72.8 92 39.1
Aa31LG9G4240 Aethionema arabicum HOM05D002652 ORTHO05D002739 4.8e-11 72.4 119 33.6
Haze_11422 Corylus avellana HOM05D001324 ORTHO05D001220 4.8e-11 72.4 123 35.0
Potri.019G027200 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.8e-11 72.4 126 31.7
Potri.010G191400 Populus trichocarpa HOM05D002652 ORTHO05D002739 6.3e-11 72.0 125 34.4
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 8.2e-11 71.6 126 33.3
Oeu011211.1 Olea europaea HOM05D002652 ORTHO05D002739 1.1e-10 71.2 120 30.8
Potri.019G027440 Populus trichocarpa HOM05D002652 ORTHO05D002739 1.1e-10 71.2 126 31.7
COL.COLO4_15987 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.4e-10 70.9 126 34.1
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.4e-10 70.1 128 32.0
Potri.T121200 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.4e-10 70.1 123 30.1
Potri.T121301 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.4e-10 70.1 123 30.1
RcHm_v2.0_Chr4g0395751 Rosa chinensis HOM05D002652 ORTHO05D002739 2.4e-10 70.1 136 32.4
COL.COLO4_15901 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.1e-10 69.7 127 31.5
QL09p048788 Quercus lobata HOM05D002652 ORTHO05D002739 3.1e-10 69.7 138 34.8
Rhsim02G0045000 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.1e-10 69.7 97 35.1
Potri.019G026780 Populus trichocarpa HOM05D002652 ORTHO05D002739 4.1e-10 69.3 126 31.7
Sabra19G0035700 Salix brachista HOM05D002652 ORTHO05D002739 4.1e-10 69.3 126 30.2
CANSAT11G2136 Cannabis sativa HOM05D002652 ORTHO05D002739 5.3e-10 68.9 127 31.5
FvH4_4g04980 Fragaria vesca HOM05D002652 ORTHO05D002739 5.3e-10 68.9 131 32.1
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 5.3e-10 68.9 131 32.1
Aa31LG7G1750 Aethionema arabicum HOM05D002652 ORTHO05D002739 6.9e-10 68.6 111 34.2
QL09p048410 Quercus lobata HOM05D002652 ORTHO05D002739 6.9e-10 68.6 128 32.8
vmacro15484 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 6.9e-10 68.6 125 30.4
RcHm_v2.0_Chr4g0395741 Rosa chinensis HOM05D002652 ORTHO05D002739 9.0e-10 68.2 129 32.6
Actinidia39935 Actinidia chinensis HOM05D002652 ORTHO05D002739 1.5e-09 67.4 75 41.3
Sabra19G0035200 Salix brachista HOM05D002652 ORTHO05D002739 2.0e-09 67.0 126 31.0
Sabra19G0035400 Salix brachista HOM05D002652 ORTHO05D002739 2.0e-09 67.0 126 31.0
FvH4_3g15020 Fragaria vesca HOM05D002652 ORTHO05D002739 2.6e-09 66.6 94 38.3
Rhsim02G0046900 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.6e-09 66.6 125 28.8
RhsimUnG0058100 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.6e-09 66.6 127 30.7
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.4e-09 66.2 130 32.3
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 4.5e-09 65.9 127 30.7
Haze_11472 Corylus avellana HOM05D002652 ORTHO05D002739 5.9e-09 65.5 113 32.7
Sabra19G0039000 Salix brachista HOM05D002652 ORTHO05D002739 5.9e-09 65.5 126 31.7
AL9U10120 Arabidopsis lyrata HOM05D002652 ORTHO05D002739 7.6e-09 65.1 129 29.5
Potri.019G026740 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.6e-09 65.1 125 30.4
QL09p048770 Quercus lobata HOM05D002652 ORTHO05D002739 7.6e-09 65.1 127 29.9
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.0e-08 64.7 127 32.3
TAR636G3443 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.0e-08 64.7 122 29.5
AT4G13440 Arabidopsis thaliana HOM05D002652 ORTHO05D002739 1.3e-08 64.3 131 29.8
FAN25G0267 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.3e-08 64.3 123 30.9
RcHm_v2.0_Chr4g0395801 Rosa chinensis HOM05D002652 ORTHO05D002739 1.3e-08 64.3 126 30.2
Aa31LG9G4330 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.2e-08 63.5 119 29.4
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 2.2e-08 63.5 101 34.7
Aa31LG7G1800 Aethionema arabicum HOM05D002652 ORTHO05D002739 2.9e-08 63.2 119 31.1
Aa31LG7G1670 Aethionema arabicum HOM05D002652 ORTHO05D002739 3.8e-08 62.8 137 31.4
Nn1g09048 Nelumbo nucifera HOM05D002652 ORTHO05D002739 3.8e-08 62.8 101 34.7
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.8e-08 62.8 159 27.7
TAR636G2313 Trochodendron aralioides HOM05D002652 ORTHO05D002739 3.8e-08 62.8 122 30.3
Rhsim02G0046300 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.0e-08 62.4 116 32.8
Aa31LG7G1790 Aethionema arabicum HOM05D002652 ORTHO05D002739 8.5e-08 61.6 119 28.6
Prupe.1G049800 Prunus persica HOM05D002652 ORTHO05D002739 8.5e-08 61.6 133 30.8
QL09p048820 Quercus lobata HOM05D002652 ORTHO05D002739 8.5e-08 61.6 128 32.0
Aa31LG7G1660 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.1e-07 61.2 121 31.4
Aa31LG9G4290 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.1e-07 61.2 79 38.0
Aa31LG9G4210 Aethionema arabicum HOM05D002652 ORTHO05D002739 1.4e-07 60.8 162 26.5
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.9e-07 60.5 129 26.4
TAR636G1048 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.9e-07 60.5 122 28.7
MSTRG.4186 Avicennia marina HOM05D002652 ORTHO05D002739 2.5e-07 60.1 127 27.6
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 3.2e-07 59.7 130 30.0
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.2e-07 59.7 129 26.4
CiPaw.02G106100 Carya illinoinensis HOM05D002652 ORTHO05D002739 4.2e-07 59.3 94 34.0
Aa31LG9G4200 Aethionema arabicum HOM05D002652 ORTHO05D002739 5.5e-07 58.9 156 26.9
COL.COLO4_15900 Corchorus olitorius HOM05D002652 ORTHO05D002739 5.5e-07 58.9 126 26.2
FAN17G3082 Fragaria x ananassa HOM05D002652 ORTHO05D002739 5.5e-07 58.9 225 24.4
Prupe.1G049700 Prunus persica HOM05D002652 ORTHO05D002739 5.5e-07 58.9 185 27.6
Rhsim02G0044400 Rhododendron simsii HOM05D002652 ORTHO05D002739 7.2e-07 58.5 102 31.4
Rhsim02G0046500 Rhododendron simsii HOM05D002652 ORTHO05D002739 7.2e-07 58.5 102 31.4
FAN12G4037 Fragaria x ananassa HOM05D002652 ORTHO05D002739 9.3e-07 58.2 130 29.2
PGR044G1935 Punica granatum HOM05D002652 ORTHO05D002739 9.3e-07 58.2 85 37.6
RhsimUnG0195100 Rhododendron simsii HOM05D002652 ORTHO05D002739 9.3e-07 58.2 76 34.2
TAR636G2060 Trochodendron aralioides HOM05D002652 ORTHO05D002739 9.3e-07 58.2 108 29.6
Cfa021216 Carpinus fangiana HOM05D002652 ORTHO05D002739 1.2e-06 57.8 94 35.1
Duzib147G0896 Durio zibethinus HOM05D002652 ORTHO05D002739 1.2e-06 57.8 124 26.6
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 2.1e-06 57.0 240 22.5
Prupe.4G134500 Prunus persica HOM05D002652 ORTHO05D002739 2.1e-06 57.0 123 28.5
PGR044G0093 Punica granatum HOM05D002652 ORTHO05D002739 2.1e-06 57.0 85 36.5
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 2.7e-06 56.6 228 22.4
FAN25G0269 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.6e-06 56.2 108 30.6
FAN21G1568 Fragaria x ananassa HOM05D002652 ORTHO05D002739 4.6e-06 55.8 204 24.0
FvH4_3g15000 Fragaria vesca HOM05D002652 ORTHO05D002739 6.1e-06 55.5 204 24.0
Rhsim02G0047000 Rhododendron simsii HOM05D002652 ORTHO05D002739 6.1e-06 55.5 75 42.7
CiPaw.08G106400 Carya illinoinensis HOM05D002652 ORTHO05D002739 7.9e-06 55.1 119 27.7


User provided reference genes

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