Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030361 Daucus carota HOM05D015514 ORTHO05D176757 3.0e-39 165.2 120 100.0
DCAR_030393 Daucus carota HOM05D015514 ORTHO05D000012 8.0e-16 87.4 53 79.2
DCAR_030364 Daucus carota HOM05D015514 ORTHO05D025228 5.2e-15 84.7 46 87.0
DCAR_030397 Daucus carota HOM05D015514 ORTHO05D000012 1.4e-12 76.6 49 79.6
DCAR_030394 Daucus carota HOM05D015514 ORTHO05D025228 7.7e-11 70.9 48 72.9
QL11p042647 Quercus lobata HOM05D000005 ORTHO05D000012 2.8e-08 62.4 67 46.3
QL11p043122 Quercus lobata HOM05D000005 ORTHO05D000012 2.8e-08 62.4 67 46.3
QL05p008400 Quercus lobata HOM05D000005 ORTHO05D000012 4.7e-08 61.6 51 58.8
RcHm_v2.0_Chr6g0260811 Rosa chinensis HOM05D000005 ORTHO05D000012 1.0e-07 60.5 58 50.0
Dinv25477 Davidia involucrata HOM05D000005 ORTHO05D000012 3.0e-07 58.9 54 50.0
QL09p051998 Quercus lobata HOM05D000005 ORTHO05D000012 4.0e-07 58.5 58 50.0
QL05p028426 Quercus lobata HOM05D000005 ORTHO05D000012 8.9e-07 57.4 57 45.6
QL09p052750 Quercus lobata HOM05D000005 ORTHO05D000012 1.2e-06 57.0 51 54.9
RcHm_v2.0_Chr5g0063811 Rosa chinensis HOM05D000005 ORTHO05D000012 1.2e-06 57.0 66 45.5
QL05p008421 Quercus lobata HOM05D000005 ORTHO05D000012 1.5e-06 56.6 51 52.9
QL10p051095 Quercus lobata HOM05D000005 ORTHO05D000012 1.5e-06 56.6 54 53.7
QL10p051133 Quercus lobata HOM05D000005 ORTHO05D001748 1.5e-06 56.6 54 51.9
Duzib268G0652 Durio zibethinus HOM05D000005 ORTHO05D000012 2.0e-06 56.2 62 43.5
MD12G1068700 Malus domestica HOM05D000005 ORTHO05D010574 2.0e-06 56.2 58 48.3
PGR004G0944 Punica granatum HOM05D000005 ORTHO05D000012 2.0e-06 56.2 64 42.2
QL09p052060 Quercus lobata HOM05D000005 ORTHO05D000012 2.0e-06 56.2 51 52.9
QL11p010312 Quercus lobata HOM05D000005 ORTHO05D000012 2.0e-06 56.2 58 51.7
QL11p020601 Quercus lobata HOM05D000005 ORTHO05D000012 2.0e-06 56.2 58 46.6
CSS0022234 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.6e-06 55.8 52 53.8
FAN10G2904 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.6e-06 55.8 59 49.2
QL05p028400 Quercus lobata HOM05D000005 ORTHO05D000012 2.6e-06 55.8 56 44.6
QL09p052923 Quercus lobata HOM05D000005 ORTHO05D000012 2.6e-06 55.8 51 52.9
RcHm_v2.0_Chr2g0106511 Rosa chinensis HOM05D000005 ORTHO05D012233 2.6e-06 55.8 64 45.3
arahy.Tifrunner.gnm1.ann1.8Z23MG Arachis hypogaea HOM05D000005 ORTHO05D000012 3.4e-06 55.5 56 42.9
Cc03_g12800 Coffea canephora HOM05D000009 ORTHO05D000008 4.4e-06 55.1 59 47.5
DCAR_030395 Daucus carota HOM05D015514 ORTHO05D025228 4.4e-06 55.1 49 51.0
Gohir.D11G295500 Gossypium hirsutum HOM05D000005 ORTHO05D000012 4.4e-06 55.1 66 36.4
Gorai.007G319000 Gossypium raimondii HOM05D000005 ORTHO05D000012 4.4e-06 55.1 66 36.4
RcHm_v2.0_Chr2g0106551 Rosa chinensis HOM05D000005 ORTHO05D012233 4.4e-06 55.1 69 42.0
RcHm_v2.0_Chr7g0225191 Rosa chinensis HOM05D000005 ORTHO05D000012 4.4e-06 55.1 58 46.6
CSS0027623 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 5.7e-06 54.7 52 51.9
CANSAT80G0488 Cannabis sativa HOM05D000009 ORTHO05D000008 5.7e-06 54.7 60 45.0
QL07p006276 Quercus lobata HOM05D000005 ORTHO05D000012 5.7e-06 54.7 52 48.1
CANSAT80G0382 Cannabis sativa HOM05D000009 ORTHO05D000008 7.5e-06 54.3 55 45.5
QL07p005737 Quercus lobata HOM05D000005 ORTHO05D000012 7.5e-06 54.3 52 50.0
QL11p010296 Quercus lobata HOM05D000005 ORTHO05D000012 7.5e-06 54.3 58 48.3
Aa31LG7G2420 Aethionema arabicum HOM05D000005 ORTHO05D013135 9.8e-06 53.9 56 42.9
Gohir.D11G295266 Gossypium hirsutum HOM05D000005 ORTHO05D000012 9.8e-06 53.9 54 48.1
QL09p001663 Quercus lobata HOM05D000005 ORTHO05D000012 9.8e-06 53.9 55 50.9
QL09p051938 Quercus lobata HOM05D000005 ORTHO05D000012 9.8e-06 53.9 51 51.0


User provided reference genes

Program Settings