Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 0.0e+00 1116.7 598 100.0
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 9.4e-150 534.6 641 51.0
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 4.7e-149 532.3 641 51.2
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.7e-138 497.3 644 49.4
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 1.4e-137 494.2 643 47.4
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.8e-137 493.8 682 49.4
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 3.6e-133 479.6 643 46.8
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.4e-132 477.6 646 47.4
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 7.8e-128 461.8 648 46.6
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.0e-127 461.5 642 46.1
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.2e-125 454.5 691 39.9
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.1e-124 449.9 640 45.2
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 6.8e-124 448.7 641 45.4
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.2e-123 448.0 699 45.4
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 1.3e-122 444.5 646 44.9
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 4.9e-122 442.6 650 44.6
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.1e-121 441.4 648 45.2
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 1.9e-121 440.7 646 43.7
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.9e-121 440.7 642 44.2
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.6e-120 437.6 645 43.3
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 6.0e-120 435.6 648 45.1
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.0e-119 434.9 648 44.8
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.9e-119 433.0 648 44.4
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.1e-118 431.4 643 45.1
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.0e-115 420.6 644 43.6
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 9.8e-115 418.3 737 40.2
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.3e-114 417.9 640 43.9
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 3.7e-114 416.4 642 43.0
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 4.9e-114 416.0 651 43.0
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 8.3e-114 415.2 650 43.5
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.9e-113 414.1 652 43.1
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 7.1e-113 412.1 643 42.3
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 1.9e-110 404.1 645 43.1
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 7.3e-110 402.1 651 43.0
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 7.3e-110 402.1 646 43.3
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 9.5e-110 401.7 645 41.2
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.8e-108 397.5 645 40.8
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 4.0e-108 396.4 641 41.7
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 6.8e-108 395.6 537 45.3
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.5e-107 394.4 643 43.2
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 4.4e-107 392.9 645 43.6
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.4e-105 387.9 645 41.4
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 9.2e-105 385.2 533 43.7
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.0e-103 381.7 540 43.5
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 1.0e-103 381.7 647 41.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 5.1e-103 379.4 648 41.4
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.8e-101 373.6 535 43.4
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 4.7e-101 372.9 669 39.2
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 4.7e-101 372.9 649 39.3
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 4.0e-100 369.8 531 43.5
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 6.9e-100 369.0 638 38.2
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 8.9e-100 368.6 526 42.4
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 8.9e-100 368.6 639 41.5
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 8.9e-100 368.6 533 42.0
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 2.6e-99 367.1 531 43.1
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 9.9e-99 365.2 596 39.9
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 9.3e-97 358.6 637 39.6
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 3.5e-96 356.7 539 42.5
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 7.8e-96 355.5 640 40.0
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.3e-95 354.0 531 41.2
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 1.9e-94 350.9 475 44.6
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 3.3e-94 350.1 640 39.4
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 1.1e-92 345.1 641 39.0
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.4e-92 344.7 639 39.9
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 2.4e-92 344.0 637 39.2
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 5.3e-92 342.8 531 41.1
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 2.6e-91 340.5 660 38.5
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.4e-89 334.7 553 37.8
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.4e-89 334.7 530 38.3
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.4e-89 334.7 581 39.9
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 4.2e-89 333.2 530 39.2
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 3.5e-88 330.1 637 38.5
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 6.0e-88 329.3 638 37.6
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.5e-86 324.7 639 38.0
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 2.5e-86 323.9 650 38.3
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.3e-85 321.6 552 40.6
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.8e-84 317.8 648 36.9
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 3.1e-84 317.0 583 40.0
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 3.4e-83 313.5 639 37.4
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 3.8e-82 310.1 640 37.2
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.1e-81 308.5 486 41.8
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 6.0e-80 302.8 665 36.4
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 9.6e-78 295.4 482 38.4
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 8.2e-77 292.4 534 37.3
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 3.1e-76 290.4 554 36.3
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 1.9e-65 254.6 528 33.3
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.3e-63 248.4 214 59.3
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 5.5e-57 226.5 625 29.9
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.7e-56 224.2 641 31.4
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.9e-51 206.5 465 38.9
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.3e-50 205.3 531 30.5
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 7.9e-48 196.1 346 41.0
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 4.1e-44 183.7 436 36.9
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.5e-42 176.0 176 52.8
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 6.7e-39 166.4 515 27.4
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 7.0e-36 156.4 306 35.9
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.2e-35 155.6 484 29.1
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 1.4e-31 142.1 124 58.1
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 5.4e-28 130.2 240 39.6
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 7.7e-27 126.3 566 26.5
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.0e-23 115.9 137 48.9
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 1.6e-19 102.1 240 32.9
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 1.0e-15 89.4 81 53.1
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 3.0e-15 87.8 203 35.5
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 4.0e-15 87.4 84 54.8
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 1.6e-11 75.5 171 31.6
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 5.0e-10 70.5 81 45.7
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.1e-09 69.3 45 66.7
Hund01947 Selenicereus undatus HOM05D001616 ORTHO05D004707 3.4e-06 57.8 231 21.2


User provided reference genes

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