Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030321 Daucus carota HOM05D000317 ORTHO05D000032 3.2e-136 488.4 250 100.0
DCAR_002636 Daucus carota HOM05D000317 ORTHO05D000032 1.5e-53 213.8 260 56.2
Actinidia37477 Actinidia chinensis HOM05D000317 ORTHO05D000032 6.7e-25 118.6 262 39.7
DCAR_023529 Daucus carota HOM05D000084 ORTHO05D000032 6.7e-25 118.6 283 37.8
Dinv16438 Davidia involucrata HOM05D000317 ORTHO05D000032 6.7e-25 118.6 282 38.7
GSVIVG01000606001 Vitis vinifera HOM05D000317 ORTHO05D000032 4.1e-22 109.4 279 38.7
QL03p040909 Quercus lobata HOM05D000317 ORTHO05D000032 9.1e-22 108.2 275 38.9
CiPaw.05G161200 Carya illinoinensis HOM05D000317 ORTHO05D000032 7.7e-21 105.1 270 38.1
QL03p040539 Quercus lobata HOM05D000317 ORTHO05D000032 1.0e-20 104.8 273 37.4
TWI77G0222 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 2.2e-20 103.6 276 34.4
TWI77G0745 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 2.2e-20 103.6 276 34.4
TAR622G0919 Trochodendron aralioides HOM05D000317 ORTHO05D000032 1.9e-19 100.5 282 36.9
Potri.008G142000 Populus trichocarpa HOM05D000317 ORTHO05D000032 4.2e-19 99.4 265 35.1
Haze_10733 Corylus avellana HOM05D000317 ORTHO05D000032 1.6e-18 97.4 262 35.5
Oeu044062.2 Olea europaea HOM05D000317 ORTHO05D000032 2.1e-18 97.1 269 36.1
Cfa015090 Carpinus fangiana HOM05D000317 ORTHO05D000032 3.6e-18 96.3 261 37.2
Aqoxy3G04164 Aquilegia oxysepala HOM05D000317 ORTHO05D000032 4.7e-18 95.9 279 35.5
TWI74G0155 Tripterygium wilfordii HOM05D000317 ORTHO05D000032 1.0e-17 94.7 276 34.4
Duzib268G1562 Durio zibethinus HOM05D000317 ORTHO05D000032 1.8e-17 94.0 279 34.4
Thecc.02G300000 Theobroma cacao HOM05D000317 ORTHO05D000032 1.8e-17 94.0 274 35.4
Manes.17G091800 Manihot esculenta HOM05D000317 ORTHO05D000032 2.3e-17 93.6 269 37.2
Sopen04g003630 Solanum pennellii HOM05D000317 ORTHO05D000032 3.0e-17 93.2 262 35.1
Gohir.D01G136600 Gossypium hirsutum HOM05D000317 ORTHO05D000032 8.8e-17 91.7 279 34.1
Gorai.002G169300 Gossypium raimondii HOM05D000317 ORTHO05D000032 8.8e-17 91.7 278 34.2
Oeu024848.1 Olea europaea HOM05D000317 ORTHO05D000032 1.5e-16 90.9 279 35.5
Solyc04g008480.2 Solanum lycopersicum HOM05D000317 ORTHO05D000032 1.5e-16 90.9 257 35.4
Gohir.A01G144100 Gossypium hirsutum HOM05D000317 ORTHO05D000032 2.0e-16 90.5 279 34.1
Nn4g24770 Nelumbo nucifera HOM05D000317 ORTHO05D000032 2.0e-16 90.5 286 35.3
Ciclev10005466m.g Citrus clementina HOM05D000317 ORTHO05D000032 4.4e-16 89.4 277 31.0
Peaxi162Scf00025g00312 Petunia axillaris HOM05D000317 ORTHO05D000032 4.4e-16 89.4 261 34.9
Duzib248G0583 Durio zibethinus HOM05D000317 ORTHO05D000032 5.7e-16 89.0 281 35.2
Duzib251G0747 Durio zibethinus HOM05D000317 ORTHO05D000032 7.5e-16 88.6 280 32.5
Potri.010G099600 Populus trichocarpa HOM05D000317 ORTHO05D000032 9.8e-16 88.2 265 33.2
Cpa.g.sc2.82 Carica papaya HOM05D000317 ORTHO05D000032 2.2e-15 87.0 266 34.6
Nitab4.5_0001777g0040 Nicotiana tabacum HOM05D000317 ORTHO05D000032 2.8e-15 86.7 284 34.2
ECA233G4531 Erigeron canadensis HOM05D000317 ORTHO05D000032 1.8e-14 84.0 264 33.3
Rhsim09G0081700 Rhododendron simsii HOM05D000317 ORTHO05D000032 3.1e-14 83.2 289 34.9
Nitab4.5_0000944g0120 Nicotiana tabacum HOM05D000317 ORTHO05D000032 4.1e-14 82.8 267 33.3
MD13G1013200 Malus domestica HOM05D000317 ORTHO05D000032 5.4e-14 82.4 250 36.0
Lsat_1_v5_gn_4_21660 Lactuca sativa HOM05D000317 ORTHO05D000032 1.6e-13 80.9 256 32.8
Phvul.007G019900 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 1.6e-13 80.9 277 34.7
PSO063G2944 Papaver somniferum HOM05D000317 ORTHO05D000032 3.5e-13 79.7 307 30.6
Sabra08G0107600 Salix brachista HOM05D000317 ORTHO05D000032 4.5e-13 79.3 268 32.5
FAN22G0751 Fragaria x ananassa HOM05D000317 ORTHO05D000032 5.9e-13 79.0 270 33.7
Cc11_g04980 Coffea canephora HOM05D000317 ORTHO05D000032 7.7e-13 78.6 286 33.2
Eucgr.B02627 Eucalyptus grandis HOM05D000317 ORTHO05D000032 1.0e-12 78.2 268 32.5
Atru.chr11.1032 Acer truncatum HOM05D000317 ORTHO05D000032 2.9e-12 76.6 269 30.5
vmacro10763 Vaccinium macrocarpon HOM05D000317 ORTHO05D000032 2.9e-12 76.6 298 31.9
Sabra10G0072300 Salix brachista HOM05D000317 ORTHO05D000032 3.8e-12 76.3 283 31.1
FAN17G2130 Fragaria x ananassa HOM05D000317 ORTHO05D000032 5.0e-12 75.9 270 33.7
Glyma.20G006000 Glycine max HOM05D000317 ORTHO05D000032 1.5e-11 74.3 258 32.9
Glyma.07G158600 Glycine max HOM05D000317 ORTHO05D000032 2.5e-11 73.6 260 32.7
Hma1.2p1_0068F.1_g037200 Hydrangea macrophylla HOM05D000317 ORTHO05D000032 2.5e-11 73.6 112 43.8
FvH4_4g35980 Fragaria vesca HOM05D000317 ORTHO05D000032 7.2e-11 72.0 268 31.3
FAN12G3657 Fragaria x ananassa HOM05D000317 ORTHO05D000032 7.2e-11 72.0 268 31.3
TAR629G0688 Trochodendron aralioides HOM05D000317 ORTHO05D000032 1.2e-10 71.2 283 34.3
CSS0035329 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D028392 1.6e-10 70.9 93 49.5
CAN.G458.11 Capsicum annuum HOM05D000317 ORTHO05D000032 1.6e-10 70.9 280 31.4
MD16G1010100 Malus domestica HOM05D000317 ORTHO05D000032 2.1e-10 70.5 252 34.1
Nitab4.5_0003889g0040 Nicotiana tabacum HOM05D000317 ORTHO05D000032 2.8e-10 70.1 281 31.7
Phvul.003G008400 Phaseolus vulgaris HOM05D000317 ORTHO05D000032 2.8e-10 70.1 261 31.0
CSS0043572 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 4.7e-10 69.3 98 48.0
CSS0047937 Camellia sinensis var. sinensis HOM05D000317 ORTHO05D000032 4.7e-10 69.3 98 48.0
Medtr1g112370 Medicago truncatula HOM05D000317 ORTHO05D000032 4.7e-10 69.3 290 29.7
PSO782G0078 Papaver somniferum HOM05D000317 ORTHO05D000032 4.7e-10 69.3 305 29.5
PGSC0003DMG400029440 Solanum tuberosum HOM05D000317 ORTHO05D000032 6.1e-10 68.9 262 31.3
ECA234G1750 Erigeron canadensis HOM05D000317 ORTHO05D000032 1.0e-09 68.2 269 30.5
Lalb_Chr06g0163591 Lupinus albus HOM05D000317 ORTHO05D000032 1.4e-09 67.8 279 30.8
Psat6g231680 Pisum sativum HOM05D000317 ORTHO05D000032 1.4e-09 67.8 267 31.5
RcHm_v2.0_Chr4g0445611 Rosa chinensis HOM05D000317 ORTHO05D000032 2.3e-09 67.0 266 29.7
VMungo1215G1217 Vigna mungo HOM05D000317 ORTHO05D000032 6.8e-09 65.5 261 31.0
Hund12778 Selenicereus undatus HOM05D000317 ORTHO05D000032 1.2e-08 64.7 358 29.6
ClCG11G000650 Citrullus lanatus HOM05D000317 ORTHO05D000032 2.6e-08 63.5 60 55.0
Gohir.A05G308400 Gossypium hirsutum HOM05D000317 ORTHO05D000032 3.4e-08 63.2 288 29.5
Sed0024710 Sechium edule HOM05D000317 ORTHO05D000032 7.5e-08 62.0 59 52.5
Ca_11203_v3 Cicer arietinum L. HOM05D000317 ORTHO05D000032 1.3e-07 61.2 274 30.7
Dinv06057 Davidia involucrata HOM05D000317 ORTHO05D000032 2.2e-07 60.5 285 31.2
HPP92_005451 Vanilla planifolia HOM05D000317 ORTHO05D000032 2.2e-07 60.5 259 31.3
Glyma.20G108600 Glycine max HOM05D000317 ORTHO05D000032 2.8e-07 60.1 265 29.8
COL.COLO4_27544 Corchorus olitorius HOM05D000317 ORTHO05D000032 3.7e-07 59.7 132 39.4
PGR102G1826 Punica granatum HOM05D000317 ORTHO05D000032 4.9e-07 59.3 255 31.8
THA.LOC104824103 Tarenaya hassleriana HOM05D000317 ORTHO05D000032 4.9e-07 59.3 256 32.4
Lsat_1_v5_gn_8_33960 Lactuca sativa HOM05D000317 ORTHO05D000032 1.1e-06 58.2 230 27.8
SGA_v2.0_scaffold127G33992 Striga asiatica HOM05D000317 ORTHO05D000032 1.1e-06 58.2 259 32.0
Medtr0223s0040 Medicago truncatula HOM05D000317 ORTHO05D000032 3.1e-06 56.6 254 28.0
CsaV3_5G012310 Cucumis sativus L. HOM05D000317 ORTHO05D000032 4.1e-06 56.2 62 51.6
Gorai.009G329400 Gossypium raimondii HOM05D000317 ORTHO05D000032 4.1e-06 56.2 284 30.3
CANSAT78G1920 Cannabis sativa HOM05D000317 ORTHO05D000032 5.4e-06 55.8 340 28.5
Lj5g0012013 Lotus japonicus HOM05D000317 ORTHO05D000032 5.4e-06 55.8 272 28.7
Manes.15G140900 Manihot esculenta HOM05D000317 ORTHO05D000032 5.4e-06 55.8 268 28.7
MELO3C022542.2 Cucumis melo HOM05D000317 ORTHO05D000032 9.2e-06 55.1 62 50.0
Lalb_Chr10g0095231 Lupinus albus HOM05D000317 ORTHO05D000032 9.2e-06 55.1 67 52.2


User provided reference genes

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