Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030317 Daucus carota HOM05D003290 ORTHO05D003866 0.0e+00 1349.7 684 100.0
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 2.4e-266 922.2 683 69.4
PGR142G0945 Punica granatum HOM05D003290 ORTHO05D003866 1.2e-260 903.3 701 67.5
Actinidia12429 Actinidia chinensis HOM05D003290 ORTHO05D003866 7.5e-260 900.6 688 68.9
Rhsim09G0082800 Rhododendron simsii HOM05D003290 ORTHO05D003866 2.4e-258 895.6 757 63.3
DCAR_030318 Daucus carota HOM05D003290 ORTHO05D003866 4.1e-258 894.8 581 76.9
Eucgr.G02062 Eucalyptus grandis HOM05D003290 ORTHO05D003866 5.9e-257 891.0 681 67.4
GSVIVG01011573001 Vitis vinifera HOM05D003290 ORTHO05D003866 7.7e-257 890.6 688 68.8
Nn4g24593 Nelumbo nucifera HOM05D003290 ORTHO05D003866 1.9e-255 885.9 687 67.4
Dinv07020 Davidia involucrata HOM05D003290 ORTHO05D003866 5.5e-255 884.4 579 75.3
Peaxi162Scf00349g00111 Petunia axillaris HOM05D003290 ORTHO05D003866 2.1e-254 882.5 685 66.9
CANSAT78G1043 Cannabis sativa HOM05D003290 ORTHO05D003866 3.6e-254 881.7 690 66.5
Atru.chr11.983 Acer truncatum HOM05D003290 ORTHO05D003866 4.7e-254 881.3 686 66.8
Cfa015081 Carpinus fangiana HOM05D003290 ORTHO05D003866 1.4e-253 879.8 681 68.3
Nitab4.5_0001529g0040 Nicotiana tabacum HOM05D003290 ORTHO05D003866 2.6e-252 875.5 683 66.0
Prupe.1G339200 Prunus persica HOM05D003290 ORTHO05D003866 1.4e-250 869.8 697 65.0
Thecc.02G301400 Theobroma cacao HOM05D003290 ORTHO05D003866 5.4e-250 867.8 695 65.9
RcHm_v2.0_Chr4g0445491 Rosa chinensis HOM05D003290 ORTHO05D003866 3.5e-249 865.1 692 65.6
Potri.008G140700 Populus trichocarpa HOM05D003290 ORTHO05D003866 4.5e-249 864.8 679 66.7
ECA234G2339 Erigeron canadensis HOM05D003290 ORTHO05D003866 5.9e-249 864.4 685 66.3
CsaV3_5G017250 Cucumis sativus L. HOM05D003290 ORTHO05D003866 2.3e-248 862.4 682 64.5
TWI74G0523 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 2.3e-248 862.4 680 66.8
Migut.E00570 Erythranthe guttata HOM05D003290 ORTHO05D003866 8.6e-248 860.5 689 65.5
COL.COLO4_27555 Corchorus olitorius HOM05D003290 ORTHO05D003866 1.1e-247 860.1 696 65.1
Potri.010G100900 Populus trichocarpa HOM05D003290 ORTHO05D003866 1.5e-247 859.8 686 66.0
MELO3C005228.2 Cucumis melo HOM05D003290 ORTHO05D003866 5.6e-247 857.8 682 64.5
Sopen01g001090 Solanum pennellii HOM05D003290 ORTHO05D003866 7.3e-247 857.4 683 64.7
PGSC0003DMG400022786 Solanum tuberosum HOM05D003290 ORTHO05D003866 7.3e-247 857.4 683 64.3
Lj6C728G5 Lonicera japonica HOM05D003290 ORTHO05D003866 2.1e-246 855.9 683 66.3
TAR629G0420 Trochodendron aralioides HOM05D003290 ORTHO05D003866 2.1e-246 855.9 688 65.1
Manes.15G139900 Manihot esculenta HOM05D003290 ORTHO05D003866 1.0e-245 853.6 692 63.9
Solyc01g005020.3 Solanum lycopersicum HOM05D003290 ORTHO05D003866 1.0e-245 853.6 683 64.6
TPR.G11847 Trifolium pratense HOM05D003290 ORTHO05D003866 2.9e-243 845.5 681 62.8
Sed0007344 Sechium edule HOM05D003290 ORTHO05D003866 6.4e-243 844.3 682 63.5
CSS0011262 Camellia sinensis var. sinensis HOM05D003290 ORTHO05D003866 1.9e-242 842.8 682 64.8
Sc03g0005960 Simmondsia chinensis HOM05D003290 ORTHO05D003866 3.2e-242 842.0 686 63.3
Lalb_Chr13g0293001 Lupinus albus HOM05D003290 ORTHO05D003866 9.2e-242 840.5 679 63.8
CAN.G282.94 Capsicum annuum HOM05D003290 ORTHO05D003866 1.2e-241 840.1 693 62.3
HanXRQChr15g0469331 Helianthus annuus HOM05D003290 ORTHO05D003866 2.3e-240 835.9 697 64.0
Sabra08G0106800 Salix brachista HOM05D003290 ORTHO05D003866 3.0e-240 835.5 735 60.8
FAN22G1284 Fragaria x ananassa HOM05D003290 ORTHO05D003866 5.0e-240 834.7 692 63.2
Lsat_1_v5_gn_5_35481 Lactuca sativa HOM05D003290 ORTHO05D003866 8.6e-240 833.9 703 64.4
Gohir.A03G113800 Gossypium hirsutum HOM05D003290 ORTHO05D003866 3.3e-239 832.0 697 63.6
Gorai.005G154600 Gossypium raimondii HOM05D003290 ORTHO05D003866 5.6e-239 831.2 700 63.3
Ca_18198_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 1.2e-238 830.1 682 62.3
Gohir.D02G138100 Gossypium hirsutum HOM05D003290 ORTHO05D003866 1.2e-238 830.1 700 63.3
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea HOM05D003290 ORTHO05D003866 2.8e-238 828.9 683 62.1
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea HOM05D003290 ORTHO05D003866 2.8e-238 828.9 683 62.1
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea HOM05D003290 ORTHO05D003866 2.8e-238 828.9 683 62.1
FvH4_4g35880 Fragaria vesca HOM05D003290 ORTHO05D003866 2.8e-238 828.9 693 62.6
FAN12G1356 Fragaria x ananassa HOM05D003290 ORTHO05D003866 2.3e-237 825.9 691 62.7
TWI56G1413 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 3.1e-237 825.5 677 64.5
Nitab4.5_0007122g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 5.2e-237 824.7 580 70.3
CiPaw.05G159900 Carya illinoinensis HOM05D003290 ORTHO05D003866 1.5e-236 823.2 680 65.1
MBI13_g17879_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 2.6e-236 822.4 686 63.6
Glyma.08G092000 Glycine max HOM05D003290 ORTHO05D003866 1.3e-235 820.1 685 62.5
Psat7g085560 Pisum sativum HOM05D003290 ORTHO05D003866 1.3e-235 820.1 683 61.8
SGA_v2.0_scaffold348G49593 Striga asiatica HOM05D003290 ORTHO05D003866 3.2e-234 815.5 690 62.6
THA.LOC104805106 Tarenaya hassleriana HOM05D003290 ORTHO05D003866 9.2e-234 813.9 688 63.5
MSTRG.2101 Avicennia marina HOM05D003290 ORTHO05D003866 4.6e-233 811.6 680 62.4
EL10Ac6g15381 Beta vulgaris HOM05D003290 ORTHO05D003866 1.3e-232 810.1 688 60.9
ClCG01G006860 Citrullus lanatus HOM05D003290 ORTHO05D003866 2.1e-230 802.7 740 57.8
AUR62003491 Chenopodium quinoa HOM05D003290 ORTHO05D003866 4.7e-230 801.6 694 60.5
Ah.03g147350 Amaranthus hybridus HOM05D003290 ORTHO05D003866 4.0e-229 798.5 713 59.2
Lj4g0019755 Lotus japonicus HOM05D003290 ORTHO05D003866 6.8e-229 797.7 684 60.2
VMungo0251G2069 Vigna mungo HOM05D003290 ORTHO05D003866 1.5e-228 796.6 681 61.5
Duzib268G0109 Durio zibethinus HOM05D003290 ORTHO05D003866 1.3e-227 793.5 697 62.4
AUR62017800 Chenopodium quinoa HOM05D003290 ORTHO05D003866 4.6e-225 785.0 688 60.2
ATR0598G076 Amborella trichopoda HOM05D003290 ORTHO05D003866 2.3e-224 782.7 686 60.8
vmacro10756 Vaccinium macrocarpon HOM05D003290 ORTHO05D003866 2.3e-224 782.7 737 59.6
Phvul.002G185150 Phaseolus vulgaris HOM05D003290 ORTHO05D003866 2.1e-222 776.2 683 60.9
Cc11_g05260 Coffea canephora HOM05D003290 ORTHO05D003866 8.1e-222 774.2 617 66.5
Manes.17G091100 Manihot esculenta HOM05D003290 ORTHO05D003866 1.4e-218 763.5 688 58.3
PSO017G1263 Papaver somniferum HOM05D003290 ORTHO05D003866 2.7e-217 759.2 698 57.3
CDE06G1581 Ceratophyllum demersum HOM05D003290 ORTHO05D003866 1.0e-216 757.3 687 59.8
Aa31LG2G7940 Aethionema arabicum HOM05D003290 ORTHO05D003866 8.1e-214 747.7 686 58.9
Carub.0005s0099 Capsella rubella HOM05D003290 ORTHO05D003866 3.2e-210 735.7 685 58.4
BcaB07g30722 Brassica carinata HOM05D003290 ORTHO05D003866 1.6e-209 733.4 686 58.5
FAN07G0883 Fragaria x ananassa HOM05D003290 ORTHO05D003866 7.9e-209 731.1 692 57.8
unitig_699.g19544 Utricularia gibba HOM05D003290 ORTHO05D003866 7.9e-209 731.1 703 55.3
A09p23700 Brassica napus HOM05D003290 ORTHO05D003866 3.0e-208 729.2 686 58.3
BraA09t37969Z Brassica rapa HOM05D003290 ORTHO05D003866 8.7e-208 727.6 686 58.3
BolC9t55917H Brassica oleracea HOM05D003290 ORTHO05D003866 1.1e-207 727.2 686 58.3
BcaC04g21541 Brassica carinata HOM05D003290 ORTHO05D003866 1.9e-207 726.5 686 58.3
Sp2g13410 Schrenkiella parvula HOM05D003290 ORTHO05D003866 5.6e-207 724.9 686 57.4
HPP92_016411 Vanilla planifolia HOM05D003290 ORTHO05D003866 5.6e-207 724.9 683 57.5
C09p30540 Brassica napus HOM05D003290 ORTHO05D003866 9.6e-207 724.2 686 58.2
Thhalv10003547m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 1.3e-206 723.8 687 57.9
Lj4g0008630 Lotus japonicus HOM05D003290 ORTHO05D003866 1.1e-205 720.7 584 62.3
AT2G01980 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 4.9e-203 711.8 685 57.2
Zm00001eb033240 Zea mays HOM05D003290 ORTHO05D003866 2.7e-201 706.1 694 55.3
Cpa.g.sc2.68 Carica papaya HOM05D003290 ORTHO05D003866 2.3e-200 703.0 476 71.8
AL5G11170 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 5.6e-199 698.4 686 57.3
QL03p039662 Quercus lobata HOM05D003290 ORTHO05D003866 7.4e-199 698.0 1081 41.5
PSO729G0139 Papaver somniferum HOM05D003290 ORTHO05D003866 3.7e-198 695.7 683 54.3
PSO170G2638 Papaver somniferum HOM05D003290 ORTHO05D003866 6.2e-198 694.9 565 60.9
PSO170G6380 Papaver somniferum HOM05D003290 ORTHO05D003866 8.1e-198 694.5 545 62.2
Os12g0641100 Oryza sativa ssp. japonica HOM05D003290 ORTHO05D003866 1.5e-196 690.3 636 56.9
CARHR144580 Cardamine hirsuta HOM05D003290 ORTHO05D003866 3.2e-194 682.6 686 55.0
Aqoxy4G00109 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 1.6e-190 670.2 582 60.0
PSO339G1388 Papaver somniferum HOM05D003290 ORTHO05D003866 7.9e-185 651.4 549 57.4
ECA246G3356 Erigeron canadensis HOM05D003290 ORTHO05D003866 4.3e-175 619.0 542 59.4
unitig_27.g25301 Utricularia gibba HOM05D003290 ORTHO05D003866 2.6e-172 609.8 694 50.6
Haze_10795 Corylus avellana HOM05D003290 ORTHO05D003866 1.5e-167 594.0 403 73.4
AagrBONN_evm.TU.Sc2ySwM_368.1085 Anthoceros agrestis HOM05D003290 ORTHO05D003866 2.2e-150 537.0 682 45.6
HanXRQChr12g0381631 Helianthus annuus HOM05D003290 ORTHO05D003866 4.5e-148 529.3 502 57.8
CiPaw.05G160100 Carya illinoinensis HOM05D003290 ORTHO05D003866 6.5e-147 525.4 429 64.3
CAN.G282.93 Capsicum annuum HOM05D003290 ORTHO05D003866 9.4e-146 521.5 502 56.4
Mapoly0206s0002 Marchantia polymorpha HOM05D003290 ORTHO05D003866 2.7e-145 520.0 695 43.3
Mapoly0062s0025 Marchantia polymorpha HOM05D003290 ORTHO05D003866 1.4e-144 517.7 699 42.5
Ciclev10015265m.g Citrus clementina HOM05D003290 ORTHO05D003866 5.9e-140 502.3 446 58.7
SMO367G0872 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 2.3e-139 500.4 466 53.9
Pp3c22_9570 Physcomitrium patens HOM05D003290 ORTHO05D003866 2.1e-137 493.8 705 42.1
SMO367G0300 Selaginella moellendorffii HOM05D003290 ORTHO05D003866 5.2e-128 462.6 531 46.9
Pp3c16_14280 Physcomitrium patens HOM05D003290 ORTHO05D003866 2.2e-126 457.2 693 40.1
AagrBONN_evm.TU.Sc2ySwM_344.5331 Anthoceros agrestis HOM05D003290 ORTHO05D003866 2.9e-126 456.8 508 47.2
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 6.6e-123 445.7 342 65.8
Eucgr.B02635 Eucalyptus grandis HOM05D003290 ORTHO05D003866 2.1e-108 397.5 506 42.5
PGR102G1943 Punica granatum HOM05D003290 ORTHO05D003866 4.6e-100 369.8 461 43.4
AT1G14660 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 6.0e-100 369.4 288 65.3
BcaC05g25383 Brassica carinata HOM05D003290 ORTHO05D003866 6.0e-100 369.4 276 67.0
BolC5t30005H Brassica oleracea HOM05D003290 ORTHO05D003866 6.0e-100 369.4 276 67.0
Sp1g13040 Schrenkiella parvula HOM05D003290 ORTHO05D003866 7.8e-100 369.0 275 66.2
C05p12620 Brassica napus HOM05D003290 ORTHO05D003866 3.9e-99 366.7 276 66.7
Peaxi162Scf00130g01216 Petunia axillaris HOM05D003290 ORTHO05D003866 9.6e-98 362.1 485 39.0
Carub.0001s1442 Capsella rubella HOM05D003290 ORTHO05D003866 2.8e-97 360.5 273 63.7
A06p10710 Brassica napus HOM05D003290 ORTHO05D003866 6.2e-97 359.4 276 65.6
CARHR015150 Cardamine hirsuta HOM05D003290 ORTHO05D003866 2.4e-96 357.5 288 63.2
BraA06t24252Z Brassica rapa HOM05D003290 ORTHO05D003866 4.0e-96 356.7 276 65.2
Sp1g13020 Schrenkiella parvula HOM05D003290 ORTHO05D003866 3.4e-95 353.6 273 65.6
AL1G26630 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 5.8e-95 352.8 288 63.2
Aa31LG2G2650 Aethionema arabicum HOM05D003290 ORTHO05D003866 1.7e-94 351.3 374 50.5
Thhalv10006906m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 2.2e-94 350.9 277 64.3
Sp1g13030 Schrenkiella parvula HOM05D003290 ORTHO05D003866 3.2e-93 347.1 271 63.5
CAN.G1237.29 Capsicum annuum HOM05D003290 ORTHO05D003866 6.0e-92 342.8 485 37.9
BcaC05g25381 Brassica carinata HOM05D003290 ORTHO05D003866 8.7e-91 339.0 276 63.8
BcaB02g06535 Brassica carinata HOM05D003290 ORTHO05D003866 1.5e-90 338.2 276 63.4
Nitab4.5_0009873g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 4.8e-89 333.2 441 41.5
Solyc04g018100.4 Solanum lycopersicum HOM05D003290 ORTHO05D003866 1.5e-87 328.2 486 37.4
Dinv02702 Davidia involucrata HOM05D003290 ORTHO05D003866 3.2e-85 320.5 204 76.5
Lsat_1_v5_gn_6_55260 Lactuca sativa HOM05D003290 ORTHO05D003866 3.5e-84 317.0 283 62.9
Ca_18188_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 1.0e-75 288.9 169 77.5
Nitab4.5_0005031g0060 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.0e-75 288.9 392 40.1
Hma1.2p1_0068F.1_g037320 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 2.5e-74 284.3 218 66.5
SEGI_17003 Sequoiadendron giganteum HOM05D003290 ORTHO05D003866 1.2e-71 275.4 225 62.7
arahy.Tifrunner.gnm1.ann1.DQT168 Arachis hypogaea HOM05D003290 ORTHO05D003866 1.7e-62 245.0 230 55.7
MD16G1011300 Malus domestica HOM05D003290 ORTHO05D003866 8.5e-62 242.7 174 67.2
Aqoxy3G04046 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 7.2e-61 239.6 298 50.3
SEGI_13848 Sequoiadendron giganteum HOM05D003290 ORTHO05D003866 9.7e-58 229.2 173 65.3
MD13G1014100 Malus domestica HOM05D003290 ORTHO05D003866 3.0e-51 207.6 297 45.1
MD16G1011400 Malus domestica HOM05D003290 ORTHO05D003866 1.1e-48 199.1 136 73.5
Sopen04g009310 Solanum pennellii HOM05D003290 ORTHO05D003866 9.1e-48 196.1 243 39.5
Cpa.g.sc2.70 Carica papaya HOM05D003290 ORTHO05D003866 3.7e-41 174.1 212 53.8
Haze_10794 Corylus avellana HOM05D003290 ORTHO05D003866 3.1e-40 171.0 208 52.4
SEGI_28338 Sequoiadendron giganteum HOM05D003290 ORTHO05D003866 7.0e-32 143.3 313 34.8
AL1G48790 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 1.0e-30 139.4 122 59.8
Aqoxy1G02273 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 1.7e-25 122.1 100 62.0
Hma1.2p1_0068F.1_g037310 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 2.7e-23 114.8 198 42.4
Cc11_g05270 Coffea canephora HOM05D003290 ORTHO05D003866 1.0e-22 112.8 68 73.5
MBI13_g26466_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 2.8e-20 104.8 68 67.6
MD13G1014200 Malus domestica HOM05D003290 ORTHO05D003866 1.4e-19 102.4 68 69.1
HanXRQChr13g0400621 Helianthus annuus HOM05D003290 ORTHO05D003866 5.2e-19 100.5 107 51.4
Potri.007G100500 Populus trichocarpa HOM05D003290 ORTHO05D003866 8.9e-19 99.8 112 49.1
CAN.G282.92 Capsicum annuum HOM05D003290 ORTHO05D003866 2.0e-18 98.6 131 46.6
Sopen00g005880 Solanum pennellii HOM05D003290 ORTHO05D003866 9.8e-10 69.7 123 35.8
MD16G1011500 Malus domestica HOM05D003290 ORTHO05D003866 1.3e-09 69.3 48 66.7
Sopen04g009320 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-09 69.3 117 35.9
Ah.03g147340 Amaranthus hybridus HOM05D003290 ORTHO05D003866 1.6e-07 62.4 232 29.3
PRCOL_00005090 Prasinoderma coloniale HOM05D003290 ORTHO05D333888 1.7e-06 58.9 137 28.5


User provided reference genes

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