Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030309 Daucus carota HOM05D004682 ORTHO05D006197 6.8e-90 334.0 167 100.0
DCAR_018370 Daucus carota HOM05D004682 ORTHO05D006197 1.6e-46 189.9 195 59.0
Lj2A1184G69 Lonicera japonica HOM05D004682 ORTHO05D006197 1.1e-34 150.6 135 60.7
Atru.chr5.1294 Acer truncatum HOM05D004682 ORTHO05D006197 3.1e-34 149.1 152 55.3
MELO3C015235.2 Cucumis melo HOM05D004682 ORTHO05D006197 6.9e-34 147.9 170 51.2
Cc01_g20100 Coffea canephora HOM05D004682 ORTHO05D006197 9.1e-34 147.5 137 58.4
GSVIVG01011020001 Vitis vinifera HOM05D004682 ORTHO05D006197 9.1e-34 147.5 170 52.9
Prupe.8G250900 Prunus persica HOM05D004682 ORTHO05D006197 1.2e-33 147.1 154 53.9
Actinidia00705 Actinidia chinensis HOM05D004682 ORTHO05D006197 1.5e-33 146.7 151 53.6
Eucgr.K03425 Eucalyptus grandis HOM05D004682 ORTHO05D006197 1.5e-33 146.7 150 52.7
Thecc.01G288600 Theobroma cacao HOM05D004682 ORTHO05D006197 1.5e-33 146.7 150 52.7
CiPaw.07G098500 Carya illinoinensis HOM05D004682 ORTHO05D006197 2.0e-33 146.4 150 54.7
Lsat_1_v5_gn_9_5121 Lactuca sativa HOM05D004682 ORTHO05D006197 2.0e-33 146.4 154 53.2
QL12p023658 Quercus lobata HOM05D004682 ORTHO05D006197 2.0e-33 146.4 154 55.2
Sed0020737 Sechium edule HOM05D004682 ORTHO05D006197 2.0e-33 146.4 153 53.6
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 2.6e-33 146.0 152 55.3
CsaV3_1G038120 Cucumis sativus L. HOM05D004682 ORTHO05D006197 3.4e-33 145.6 170 50.6
HanXRQChr10g0283031 Helianthus annuus HOM05D004682 ORTHO05D006197 3.4e-33 145.6 148 52.0
Hma1.2p1_0399F.1_g144310 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 3.4e-33 145.6 152 53.9
Hma1.2p1_0399F.1_g144320 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 3.4e-33 145.6 152 53.9
Hma1.2p1_1049F.1_g251875 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 3.4e-33 145.6 152 53.9
ClCG03G018080 Citrullus lanatus HOM05D004682 ORTHO05D006197 5.9e-33 144.8 170 50.0
Ciclev10018593m.g Citrus clementina HOM05D004682 ORTHO05D006197 1.0e-32 144.1 152 53.9
CSS0044691 Camellia sinensis var. sinensis HOM05D004682 ORTHO05D006197 1.3e-32 143.7 150 54.0
Gohir.A11G118700 Gossypium hirsutum HOM05D004682 ORTHO05D006197 1.3e-32 143.7 153 53.6
Gohir.D11G123600 Gossypium hirsutum HOM05D004682 ORTHO05D006197 1.7e-32 143.3 153 53.6
MD11G1296700 Malus domestica HOM05D004682 ORTHO05D006197 2.2e-32 142.9 158 52.5
Manes.01G212500 Manihot esculenta HOM05D004682 ORTHO05D006197 2.2e-32 142.9 167 50.3
Potri.002G230800 Populus trichocarpa HOM05D004682 ORTHO05D006197 2.9e-32 142.5 152 53.3
PGR044G1334 Punica granatum HOM05D004682 ORTHO05D006197 5.0e-32 141.7 170 50.6
vmacro02515 Vaccinium macrocarpon HOM05D004682 ORTHO05D006197 5.0e-32 141.7 147 55.8
CANSAT25G1381 Cannabis sativa HOM05D004682 ORTHO05D006197 6.5e-32 141.4 164 50.6
Duzib138G0788 Durio zibethinus HOM05D004682 ORTHO05D006197 8.5e-32 141.0 152 52.6
AUR62013599 Chenopodium quinoa HOM05D004682 ORTHO05D006197 1.4e-31 140.2 151 50.3
Hma1.2p1_1049F.1_g251880 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 2.5e-31 139.4 124 58.1
Solyc05g026510.4 Solanum lycopersicum HOM05D004682 ORTHO05D006197 2.5e-31 139.4 151 51.0
Sopen05g022990 Solanum pennellii HOM05D004682 ORTHO05D006197 2.5e-31 139.4 151 51.0
Gorai.007G132500 Gossypium raimondii HOM05D004682 ORTHO05D006197 5.5e-31 138.3 153 52.3
CAN.G13.21 Capsicum annuum HOM05D004682 ORTHO05D006197 7.2e-31 137.9 150 50.0
Oeu002696.1 Olea europaea HOM05D004682 ORTHO05D006197 7.2e-31 137.9 146 50.7
SalBow3G2371 Salvia bowleyana HOM05D004682 ORTHO05D006197 7.2e-31 137.9 151 47.7
Rhsim13G0018300 Rhododendron simsii HOM05D004682 ORTHO05D006197 1.2e-30 137.1 147 51.7
COL.COLO4_08044 Corchorus olitorius HOM05D004682 ORTHO05D006197 2.1e-30 136.3 153 53.6
Sc17g0003630 Simmondsia chinensis HOM05D004682 ORTHO05D006197 2.1e-30 136.3 151 49.7
FvH4_2g24570 Fragaria vesca HOM05D004682 ORTHO05D006197 3.6e-30 135.6 152 52.0
FAN24G1905 Fragaria x ananassa HOM05D004682 ORTHO05D006197 3.6e-30 135.6 152 52.0
TAR633G2734 Trochodendron aralioides HOM05D004682 ORTHO05D006197 3.6e-30 135.6 150 50.0
FAN15G3206 Fragaria x ananassa HOM05D004682 ORTHO05D006197 4.7e-30 135.2 152 52.0
Glyma.03G207600 Glycine max HOM05D004682 ORTHO05D006197 6.1e-30 134.8 150 50.0
RcHm_v2.0_Chr6g0292391 Rosa chinensis HOM05D004682 ORTHO05D006197 1.0e-29 134.0 152 51.3
Ca_09103_v3 Cicer arietinum L. HOM05D004682 ORTHO05D006197 1.4e-29 133.7 154 53.2
PGSC0003DMG401015901 Solanum tuberosum HOM05D004682 ORTHO05D006197 1.4e-29 133.7 152 49.3
COL.COLO4_31667 Corchorus olitorius HOM05D004682 ORTHO05D006197 1.8e-29 133.3 130 52.3
PSO170G5080 Papaver somniferum HOM05D004682 ORTHO05D006197 1.8e-29 133.3 145 51.7
VMungo1383G2773 Vigna mungo HOM05D004682 ORTHO05D006197 1.8e-29 133.3 157 49.0
FAN27G0404 Fragaria x ananassa HOM05D004682 ORTHO05D006197 2.3e-29 132.9 152 50.7
Medtr7g107440 Medicago truncatula HOM05D004682 ORTHO05D006197 2.3e-29 132.9 158 50.0
THA.LOC104817537 Tarenaya hassleriana HOM05D004682 ORTHO05D006197 2.3e-29 132.9 166 45.8
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 3.9e-29 132.1 153 51.0
AUR62026692 Chenopodium quinoa HOM05D004682 ORTHO05D006197 5.1e-29 131.7 175 44.6
ECA247G2915 Erigeron canadensis HOM05D004682 ORTHO05D006197 5.1e-29 131.7 154 48.7
TPR.G32282 Trifolium pratense HOM05D004682 ORTHO05D006197 5.1e-29 131.7 164 47.0
Carub.0004s3070 Capsella rubella HOM05D004682 ORTHO05D006197 6.7e-29 131.3 141 49.6
Migut.D00237 Erythranthe guttata HOM05D004682 ORTHO05D006197 6.7e-29 131.3 144 46.5
Thhalv10001288m.g Eutrema salsugineum HOM05D004682 ORTHO05D006197 6.7e-29 131.3 141 49.6
PSO407G0071 Papaver somniferum HOM05D004682 ORTHO05D006197 6.7e-29 131.3 127 54.3
Psat3g025520 Pisum sativum HOM05D004682 ORTHO05D006197 6.7e-29 131.3 151 49.7
Sabra02G0176000 Salix brachista HOM05D004682 ORTHO05D006197 6.7e-29 131.3 152 50.0
Phvul.001G201200 Phaseolus vulgaris HOM05D004682 ORTHO05D006197 8.8e-29 131.0 168 48.2
arahy.Tifrunner.gnm1.ann1.SJK0SQ Arachis hypogaea HOM05D004682 ORTHO05D006197 2.0e-28 129.8 152 50.0
Cpa.g.sc9.149 Carica papaya HOM05D004682 ORTHO05D006197 2.0e-28 129.8 163 46.0
Lj1g0026346 Lotus japonicus HOM05D004682 ORTHO05D006197 2.0e-28 129.8 148 50.7
Ah.05g167980 Amaranthus hybridus HOM05D004682 ORTHO05D006197 2.6e-28 129.4 151 47.7
Lalb_Chr25g0287581 Lupinus albus HOM05D004682 ORTHO05D006197 4.4e-28 128.6 164 48.2
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 7.4e-28 127.9 122 52.5
CARHR143360 Cardamine hirsuta HOM05D004682 ORTHO05D006197 1.3e-27 127.1 141 48.9
MSTRG.18200 Avicennia marina HOM05D004682 ORTHO05D006197 1.7e-27 126.7 151 47.7
FAN20G1430 Fragaria x ananassa HOM05D004682 ORTHO05D006197 2.8e-27 125.9 140 49.3
Sp4g29900 Schrenkiella parvula HOM05D004682 ORTHO05D006197 3.7e-27 125.6 144 46.5
SGA_v2.0_scaffold1G00427 Striga asiatica HOM05D004682 ORTHO05D006197 3.7e-27 125.6 123 51.2
ATR0706G112 Amborella trichopoda HOM05D004682 ORTHO05D006197 4.8e-27 125.2 165 44.2
Hund18022 Selenicereus undatus HOM05D004682 ORTHO05D006197 6.3e-27 124.8 140 47.9
Nn3g21239 Nelumbo nucifera HOM05D004682 ORTHO05D006197 8.2e-27 124.4 166 45.2
AT2G47980 Arabidopsis thaliana HOM05D004682 ORTHO05D006197 1.4e-26 123.6 135 48.9
Aqoxy2G03153 Aquilegia oxysepala HOM05D004682 ORTHO05D006197 2.4e-26 122.9 151 48.3
EL10Ac1g01562 Beta vulgaris HOM05D004682 ORTHO05D006197 4.1e-26 122.1 141 48.2
BcaC02g12533 Brassica carinata HOM05D004682 ORTHO05D006197 4.1e-26 122.1 141 48.2
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 4.1e-26 122.1 141 48.2
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 4.1e-26 122.1 141 48.2
Aa31LG1G29400 Aethionema arabicum HOM05D004682 ORTHO05D006197 5.3e-26 121.7 141 46.8
AL4G47570 Arabidopsis lyrata HOM05D004682 ORTHO05D006197 5.3e-26 121.7 131 49.6
MBI19_g27957_MAGBIO Magnolia biondii HOM05D004682 ORTHO05D006197 5.3e-26 121.7 150 45.3
BcaB02g08728 Brassica carinata HOM05D004682 ORTHO05D006197 6.9e-26 121.3 141 48.2
Medtr1g048130 Medicago truncatula HOM05D004682 ORTHO05D006197 1.5e-25 120.2 133 50.4
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.6e-25 119.4 141 47.5
arahy.Tifrunner.gnm1.ann1.BJ6WT1 Arachis hypogaea HOM05D004682 ORTHO05D006197 3.4e-25 119.0 141 48.9
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 5.9e-25 118.2 141 46.8
Lalb_Chr20g0111011 Lupinus albus HOM05D004682 ORTHO05D006197 5.9e-25 118.2 154 48.1
CDE05G1251 Ceratophyllum demersum HOM05D004682 ORTHO05D006197 6.5e-24 114.8 150 44.0
HPP92_027340 Vanilla planifolia HOM05D004682 ORTHO05D006197 1.4e-23 113.6 130 46.9
AL7G17990 Arabidopsis lyrata HOM05D004682 ORTHO05D006197 9.4e-23 110.9 150 42.0
Medtr1g047970 Medicago truncatula HOM05D004682 ORTHO05D006197 4.7e-22 108.6 160 45.0
HPP92_017192 Vanilla planifolia HOM05D004682 ORTHO05D006197 6.1e-22 108.2 132 44.7
SEGI_13218 Sequoiadendron giganteum HOM05D004682 ORTHO05D006197 1.4e-21 107.1 170 39.4
Haze_04797 Corylus avellana HOM05D004682 ORTHO05D006197 2.3e-21 106.3 96 58.3
Os05g0188500 Oryza sativa ssp. japonica HOM05D004682 ORTHO05D006197 5.2e-21 105.1 130 44.6
unitig_22.g5252 Utricularia gibba HOM05D004682 ORTHO05D006197 2.6e-20 102.8 153 39.9
Nitab4.5_0000282g0030 Nicotiana tabacum HOM05D004682 ORTHO05D006197 1.4e-18 97.1 152 40.8
Zm00001eb115650 Zea mays HOM05D004682 ORTHO05D006197 2.0e-17 93.2 130 41.5
SMO347G0479 Selaginella moellendorffii HOM05D004682 ORTHO05D006197 2.6e-17 92.8 122 39.3
Peaxi162Scf00159g01650 Petunia axillaris HOM05D004682 ORTHO05D006197 2.9e-16 89.4 140 40.7
Mapoly0007s0132 Marchantia polymorpha HOM05D004682 ORTHO05D006197 1.5e-15 87.0 159 33.3
Actinidia24288 Actinidia chinensis HOM05D004682 ORTHO05D006197 3.2e-15 85.9 87 48.3
TWI59G0906 Tripterygium wilfordii HOM05D004682 ORTHO05D006197 4.2e-15 85.5 97 52.6
CBR_g31051 Chara braunii HOM05D004682 ORTHO05D006197 2.1e-14 83.2 133 36.8
AagrBONN_evm.TU.Sc2ySwM_369.560 Anthoceros agrestis HOM05D004682 ORTHO05D006197 8.0e-14 81.3 141 34.8
SHI14494 Sapria himalayana HOM05D004682 ORTHO05D006197 8.2e-11 71.2 113 36.3


User provided reference genes

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