Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.6e-203 711.8 359 100.0
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.3e-167 593.2 361 81.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.1e-164 582.0 359 79.9
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 4.0e-164 581.6 355 80.3
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 6.9e-164 580.9 361 79.8
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 2.6e-163 578.9 353 80.7
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.4e-163 578.6 359 79.7
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 9.9e-163 577.0 362 79.3
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 6.4e-162 574.3 345 81.2
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 1.4e-161 573.2 360 79.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.9e-161 572.8 360 78.6
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.9e-161 572.8 358 77.7
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.5e-161 571.2 359 78.6
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 7.1e-161 570.9 354 79.1
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 7.1e-161 570.9 358 78.2
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 1.6e-160 569.7 359 78.8
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 2.7e-160 568.9 356 79.5
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 4.6e-160 568.2 361 78.7
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 7.9e-160 567.4 361 77.8
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 1.8e-159 566.2 357 77.6
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 3.9e-159 565.1 354 79.9
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 6.7e-159 564.3 360 77.2
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 6.7e-159 564.3 356 77.5
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 1.1e-158 563.5 360 78.3
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 1.9e-158 562.8 361 77.0
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 2.5e-158 562.4 354 79.7
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 3.3e-158 562.0 359 76.9
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 3.3e-158 562.0 356 76.7
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 4.3e-158 561.6 360 77.2
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 4.3e-158 561.6 356 76.7
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 5.6e-158 561.2 358 77.4
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.6e-157 559.7 357 77.3
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 2.1e-157 559.3 342 81.0
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 2.1e-157 559.3 358 76.5
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 2.8e-157 558.9 354 78.0
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.7e-157 558.5 360 78.1
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 6.2e-157 557.8 353 78.5
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 6.2e-157 557.8 362 76.0
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 8.2e-157 557.4 364 75.5
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 8.2e-157 557.4 358 76.8
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 1.1e-156 557.0 362 76.8
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.4e-156 556.6 357 77.0
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.4e-156 556.6 383 73.9
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 2.4e-156 555.8 358 77.1
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.5e-155 553.1 361 76.5
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.5e-155 553.1 358 77.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.6e-155 552.4 356 76.1
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 3.4e-155 552.0 365 76.7
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 7.6e-155 550.8 360 75.0
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 1.0e-154 550.4 358 76.5
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 2.9e-154 548.9 361 74.2
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 3.8e-154 548.5 384 72.4
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 3.8e-154 548.5 357 76.2
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 4.9e-154 548.1 372 74.2
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 4.6e-152 541.6 353 76.5
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 9.7e-150 533.9 395 68.9
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 6.3e-149 531.2 350 76.3
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 1.8e-148 529.6 361 75.9
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 6.9e-148 527.7 360 74.7
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.5e-147 526.6 358 72.9
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 1.3e-146 523.5 345 77.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 2.2e-146 522.7 396 69.2
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.2e-144 516.9 351 72.4
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.7e-144 515.8 354 70.9
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 4.6e-144 515.0 361 71.2
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.0e-142 509.6 311 81.7
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 1.4e-140 503.4 351 71.2
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 3.4e-139 498.8 353 68.8
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 1.4e-137 493.4 344 68.9
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-131 473.0 342 69.3
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-131 473.0 342 69.3
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 7.7e-131 471.1 392 64.3
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 5.3e-124 448.4 300 77.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.3e-122 443.7 354 66.4
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.1e-121 440.7 356 66.6
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 1.4e-111 407.1 345 60.0
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.1e-105 387.5 342 59.9
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.0e-102 376.7 226 81.0
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.4e-102 375.9 225 80.4
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 3.5e-99 365.9 226 79.2
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 1.3e-93 347.4 277 65.0
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 2.2e-93 346.7 267 69.3
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 9.8e-86 321.2 183 86.3
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 3.0e-82 309.7 231 65.4
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.1e-80 303.5 174 82.8
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 4.4e-78 295.8 344 47.7
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 2.4e-60 236.9 195 64.6
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 9.3e-60 235.0 145 80.7
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 4.5e-46 189.5 136 69.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 2.9e-45 186.8 130 71.5
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.5e-09 68.2 77 54.5
MBI11_g02080_MAGBIO Magnolia biondii HOM05D049150 ORTHO05D048537 5.9e-06 56.2 28 89.3


User provided reference genes

Program Settings