Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030108 Daucus carota HOM05D004673 ORTHO05D005596 2.9e-170 602.1 360 100.0
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 6.1e-43 179.1 654 35.5
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 2.8e-40 170.2 197 75.6
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 9.0e-39 165.2 196 76.5
DCAR_030112 Daucus carota HOM05D004673 ORTHO05D005596 4.2e-36 156.4 197 72.6
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 5.5e-36 156.0 200 73.5
DCAR_030102 Daucus carota HOM05D004673 ORTHO05D005596 5.5e-36 156.0 198 74.2
DCAR_030110 Daucus carota HOM05D004673 ORTHO05D005596 7.2e-36 155.6 201 71.1
DCAR_030099 Daucus carota HOM05D004673 ORTHO05D005596 3.0e-34 150.2 198 73.7
DCAR_030979 Daucus carota HOM05D004673 ORTHO05D005596 3.9e-34 149.8 204 71.1
DCAR_030100 Daucus carota HOM05D004673 ORTHO05D005596 2.0e-33 147.5 198 71.2
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 9.7e-33 145.2 199 71.4
CSS0005892 Camellia sinensis var. sinensis HOM05D004673 ORTHO05D005596 5.0e-29 132.9 199 67.8
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 6.7e-26 122.5 201 66.7
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 1.1e-25 121.7 184 69.0
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 2.6e-25 120.6 275 51.6
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 5.7e-25 119.4 200 66.0
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 1.7e-24 117.9 189 66.7
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 3.7e-24 116.7 192 66.1
Sabra01G0002300 Salix brachista HOM05D004673 ORTHO05D005596 6.3e-24 115.9 200 63.5
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 8.2e-24 115.5 200 64.0
Manes.03G086906 Manihot esculenta HOM05D004673 ORTHO05D005596 4.1e-23 113.2 200 64.5
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 4.1e-23 113.2 200 61.5
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 4.1e-23 113.2 186 67.7
Dinv00554 Davidia involucrata HOM05D004673 ORTHO05D005596 7.0e-23 112.5 196 64.3
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 1.2e-22 111.7 201 63.2
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 1.6e-22 111.3 176 68.8
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 2.0e-22 110.9 185 67.0
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 2.0e-22 110.9 187 66.3
Thecc.05G294400 Theobroma cacao HOM05D004673 ORTHO05D005596 2.0e-22 110.9 197 61.4
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 2.6e-22 110.5 188 64.4
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 4.5e-22 109.8 174 69.0
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 5.9e-22 109.4 176 68.8
CANSAT11G1431 Cannabis sativa HOM05D004673 ORTHO05D005596 1.0e-21 108.6 203 61.1
Gohir.A11G259500 Gossypium hirsutum HOM05D004673 ORTHO05D005596 1.3e-21 108.2 200 62.0
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 1.7e-21 107.8 182 67.6
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 2.9e-21 107.1 182 66.5
Sed0024334 Sechium edule HOM05D004673 ORTHO05D005596 2.9e-21 107.1 199 63.3
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 5.0e-21 106.3 201 62.2
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 5.0e-21 106.3 186 62.4
COL.COLO4_13599 Corchorus olitorius HOM05D004673 ORTHO05D005596 6.5e-21 105.9 200 62.5
BcaB04g19351 Brassica carinata HOM05D004673 ORTHO05D005596 1.1e-20 105.1 196 62.2
C03p40670 Brassica napus HOM05D004673 ORTHO05D005596 1.1e-20 105.1 196 62.2
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 1.1e-20 105.1 185 67.6
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 1.5e-20 104.8 178 67.4
Lsat_1_v5_gn_6_55460 Lactuca sativa HOM05D004673 ORTHO05D005596 2.5e-20 104.0 184 64.7
QL01p004480 Quercus lobata HOM05D004673 ORTHO05D005596 2.5e-20 104.0 200 61.5
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 4.2e-20 103.2 176 66.5
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 4.2e-20 103.2 206 57.3
Carub.0003s0318 Capsella rubella HOM05D004673 ORTHO05D005596 1.6e-19 101.3 181 65.7
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 1.6e-19 101.3 186 64.5
DCAR_030115 Daucus carota HOM05D004673 ORTHO05D005596 1.6e-19 101.3 150 80.7
GSVIVG01025477001 Vitis vinifera HOM05D004673 ORTHO05D005596 1.6e-19 101.3 101 49.5
DCAR_030125 Daucus carota HOM05D004673 ORTHO05D005596 2.7e-19 100.5 153 77.1
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 2.7e-19 100.5 200 60.0
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 4.7e-19 99.8 187 61.5
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 6.1e-19 99.4 182 65.9
Lj2P776T43 Lonicera japonica HOM05D004673 ORTHO05D005596 8.0e-19 99.0 98 50.0
EL10Ac3g06819 Beta vulgaris HOM05D004673 ORTHO05D005596 1.4e-18 98.2 182 63.7
HanXRQChr13g0405711 Helianthus annuus HOM05D004673 ORTHO05D005596 1.8e-18 97.8 176 67.0
HanXRQChr07g0187111 Helianthus annuus HOM05D004673 ORTHO05D005596 2.3e-18 97.4 176 66.5
BolC3t16332H Brassica oleracea HOM05D004673 ORTHO05D005596 3.0e-18 97.1 178 65.2
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 3.0e-18 97.1 197 61.9
BraA03t12522Z Brassica rapa HOM05D004673 ORTHO05D005596 4.0e-18 96.7 196 60.7
MELO3C015573.2 Cucumis melo HOM05D004673 ORTHO05D005596 5.2e-18 96.3 196 61.2
CAN.G1834.13 Capsicum annuum HOM05D004673 ORTHO05D005596 6.7e-18 95.9 197 60.4
CARHR078050 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.5e-17 94.7 181 63.5
Carub.0006s3213 Capsella rubella HOM05D004673 ORTHO05D005596 3.3e-17 93.6 180 64.4
ECA233G4672 Erigeron canadensis HOM05D004673 ORTHO05D005596 7.5e-17 92.4 176 65.3
A03p33470 Brassica napus HOM05D004673 ORTHO05D005596 9.7e-17 92.0 196 59.7
CsaV3_1G041620 Cucumis sativus L. HOM05D004673 ORTHO05D005596 9.7e-17 92.0 199 60.8
Lj1P522T31 Lonicera japonica HOM05D004673 ORTHO05D005596 9.7e-17 92.0 95 47.4
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 9.7e-17 92.0 200 59.0
Sp3g02900 Schrenkiella parvula HOM05D004673 ORTHO05D005596 9.7e-17 92.0 177 65.0
HanXRQChr13g0405741 Helianthus annuus HOM05D004673 ORTHO05D005596 1.3e-16 91.7 176 68.2
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 1.3e-16 91.7 214 48.6
CARHR253250 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.7e-16 91.3 173 65.9
QL01p004552 Quercus lobata HOM05D004673 ORTHO05D005596 2.2e-16 90.9 198 59.1
Thhalv10027707m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 2.8e-16 90.5 181 61.3
Cpa.g.c34637 Carica papaya HOM05D004673 ORTHO05D005596 3.7e-16 90.1 196 60.2
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 8.2e-16 89.0 199 58.8
Gorai.007G289600 Gossypium raimondii HOM05D004673 ORTHO05D005596 1.1e-15 88.6 176 64.8
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 1.1e-15 88.6 80 50.0
Aa31LG5G14520 Aethionema arabicum HOM05D004673 ORTHO05D005596 1.4e-15 88.2 188 60.1
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 4.1e-15 86.7 183 62.8
QL08p003638 Quercus lobata HOM05D004673 ORTHO05D005596 4.1e-15 86.7 204 57.8
AL6G47840 Arabidopsis lyrata HOM05D004673 ORTHO05D005596 9.1e-15 85.5 185 61.1
QL08p003602 Quercus lobata HOM05D004673 ORTHO05D005596 9.1e-15 85.5 180 62.2
BcaB07g31134 Brassica carinata HOM05D004673 ORTHO05D005596 1.6e-14 84.7 182 61.0
AT4G04220 Arabidopsis thaliana HOM05D004673 ORTHO05D005596 4.5e-14 83.2 177 62.7
CARHR253220 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.5e-14 83.2 174 62.1
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 1.0e-13 82.0 183 60.7
Dinv00553 Davidia involucrata HOM05D004673 ORTHO05D005596 1.7e-13 81.3 85 50.6
COL.COLO4_13601 Corchorus olitorius HOM05D000750 ORTHO05D000714 2.2e-13 80.9 97 41.2
Aa31LG5G14510 Aethionema arabicum HOM05D004673 ORTHO05D005596 8.5e-13 79.0 179 62.0
MBI11_g38090_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 8.5e-13 79.0 201 58.2
CARHR253370 Cardamine hirsuta HOM05D004673 ORTHO05D005596 7.2e-12 75.9 181 60.8
THA.LOC104816063 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 7.2e-12 75.9 156 69.2
DCAR_030119 Daucus carota HOM05D004673 ORTHO05D005596 9.4e-12 75.5 52 69.2
ECA233G2517 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-12 75.5 159 69.2
DCAR_030126 Daucus carota HOM05D004673 ORTHO05D005596 3.6e-11 73.6 139 76.3
HPP92_013964 Vanilla planifolia HOM05D004673 ORTHO05D005596 3.6e-11 73.6 187 59.9
QL01p004071 Quercus lobata HOM05D004673 ORTHO05D005596 4.7e-11 73.2 197 53.8
CARHR253180 Cardamine hirsuta HOM05D004673 ORTHO05D005596 6.1e-11 72.8 160 56.9
CARHR253290 Cardamine hirsuta HOM05D004673 ORTHO05D005596 3.0e-10 70.5 131 76.3
ATR0697G215 Amborella trichopoda HOM05D004673 ORTHO05D005596 5.2e-10 69.7 199 54.8
HPP92_013962 Vanilla planifolia HOM05D004673 ORTHO05D005596 5.2e-10 69.7 194 56.2
DCAR_030118 Daucus carota HOM05D004673 ORTHO05D005596 2.0e-09 67.8 51 60.8
QL01p004463 Quercus lobata HOM05D004673 ORTHO05D005596 2.6e-09 67.4 155 61.9
HanXRQChr07g0187551 Helianthus annuus HOM05D004673 ORTHO05D005596 7.5e-09 65.9 69 49.3
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 1.3e-08 65.1 45 68.9
COL.COLO4_13600 Corchorus olitorius HOM05D004673 ORTHO05D005596 2.2e-08 64.3 75 40.0
QL07p015672 Quercus lobata HOM05D004673 ORTHO05D005596 3.7e-08 63.5 184 41.3
Dinv09265 Davidia involucrata HOM05D004673 ORTHO05D005596 1.1e-07 62.0 132 38.6
AUR62032689 Chenopodium quinoa HOM05D000750 ORTHO05D000714 1.8e-07 61.2 139 33.8
HPP92_013963 Vanilla planifolia HOM05D004673 ORTHO05D005596 1.8e-07 61.2 192 54.7
CARHR253240 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.4e-07 60.8 42 64.3
Lj1P521T7 Lonicera japonica HOM05D004673 ORTHO05D005596 3.1e-07 60.5 50 56.0
Actinidia00906 Actinidia chinensis HOM05D004673 ORTHO05D005596 9.1e-07 58.9 41 65.9
CARHR253200 Cardamine hirsuta HOM05D004673 ORTHO05D005596 1.2e-06 58.5 44 61.4
Thhalv10027711m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 1.2e-06 58.5 170 57.1
CARHR253280 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.0e-06 57.8 44 59.1
BcaC01g04387 Brassica carinata HOM05D004673 ORTHO05D005596 2.7e-06 57.4 38 63.2
C09p23810 Brassica napus HOM05D004673 ORTHO05D005596 4.5e-06 56.6 44 59.1
BolC9t55304H Brassica oleracea HOM05D004673 ORTHO05D005596 4.5e-06 56.6 44 59.1


User provided reference genes

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