Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030106 Daucus carota HOM05D000424 ORTHO05D000355 1.6e-45 185.7 91 100.0
DCAR_030120 Daucus carota HOM05D000424 ORTHO05D000355 4.9e-42 174.1 87 96.6
Lsat_1_v5_gn_2_6800 Lactuca sativa HOM05D000424 ORTHO05D000355 6.9e-36 153.7 91 82.4
GSVIVG01008742001 Vitis vinifera HOM05D000424 ORTHO05D000355 6.7e-31 137.1 91 72.5
DCAR_030127 Daucus carota HOM05D000424 ORTHO05D000355 7.4e-30 133.7 64 100.0
Potri.005G245500 Populus trichocarpa HOM05D000424 ORTHO05D000355 6.2e-29 130.6 89 68.5
Actinidia37949 Actinidia chinensis HOM05D000424 ORTHO05D000355 3.1e-28 128.3 81 72.8
Dinv43544 Davidia involucrata HOM05D000424 ORTHO05D000355 2.2e-26 122.1 63 92.1
HanXRQChr06g0185091 Helianthus annuus HOM05D000424 ORTHO05D000355 4.2e-25 117.9 64 87.5
CANSAT01G3161 Cannabis sativa HOM05D000424 ORTHO05D000355 9.3e-25 116.7 63 85.7
TAR376G0085 Trochodendron aralioides HOM05D000424 ORTHO05D000355 1.2e-24 116.3 66 83.3
Potri.005G245400 Populus trichocarpa HOM05D000424 ORTHO05D000355 1.6e-24 115.9 63 85.7
ECA238G3774 Erigeron canadensis HOM05D000424 ORTHO05D000355 3.5e-24 114.8 62 90.3
Ciclev10000789m.g Citrus clementina HOM05D000424 ORTHO05D000355 7.9e-24 113.6 63 82.5
Rhsim07G0248500 Rhododendron simsii HOM05D000424 ORTHO05D000355 3.0e-23 111.7 62 82.3
CAN.G311.72 Capsicum annuum HOM05D000424 ORTHO05D000355 3.9e-23 111.3 63 79.4
Sopen04g035590 Solanum pennellii HOM05D000424 ORTHO05D000355 3.9e-23 111.3 63 79.4
PGSC0003DMG400009885 Solanum tuberosum HOM05D000424 ORTHO05D000355 3.9e-23 111.3 63 79.4
Aqoxy6G01988 Aquilegia oxysepala HOM05D000424 ORTHO05D000355 5.1e-23 110.9 63 81.0
Sabra05G0189600 Salix brachista HOM05D000424 ORTHO05D000355 5.1e-23 110.9 62 83.9
Nn1g07956 Nelumbo nucifera HOM05D000424 ORTHO05D000355 6.7e-23 110.5 61 88.5
QL02p012919 Quercus lobata HOM05D000424 ORTHO05D000355 6.7e-23 110.5 62 82.3
CSS0033496 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 8.7e-23 110.2 63 84.1
FvH4_2g37970 Fragaria vesca HOM05D000424 ORTHO05D000355 8.7e-23 110.2 60 86.7
PGR083G2387 Punica granatum HOM05D000424 ORTHO05D000355 8.7e-23 110.2 63 84.1
Prupe.1G359600 Prunus persica HOM05D000424 ORTHO05D000355 1.1e-22 109.8 63 81.0
CiPaw.07G143800 Carya illinoinensis HOM05D000424 ORTHO05D000355 1.5e-22 109.4 62 83.9
Thhalv10007329m.g Eutrema salsugineum HOM05D000424 ORTHO05D000355 1.5e-22 109.4 63 81.0
FAN20G0922 Fragaria x ananassa HOM05D000424 ORTHO05D000355 1.5e-22 109.4 62 82.3
FAN27G1492 Fragaria x ananassa HOM05D000424 ORTHO05D000355 1.5e-22 109.4 62 82.3
RcHm_v2.0_Chr6g0303651 Rosa chinensis HOM05D000424 ORTHO05D000355 1.5e-22 109.4 62 82.3
vmacro17156 Vaccinium macrocarpon HOM05D000424 ORTHO05D000355 1.5e-22 109.4 61 85.2
Manes.04G002700 Manihot esculenta HOM05D000424 ORTHO05D000355 1.9e-22 109.0 63 85.7
Aa31LG7G4660 Aethionema arabicum HOM05D000424 ORTHO05D000355 4.3e-22 107.8 63 79.4
CsaV3_3G046110 Cucumis sativus L. HOM05D000424 ORTHO05D000355 4.3e-22 107.8 66 72.7
FAN15G0476 Fragaria x ananassa HOM05D000424 ORTHO05D000355 4.3e-22 107.8 62 80.6
Hma1.2p1_1598F.1_g292930 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 4.3e-22 107.8 58 87.9
Solyc04g081950.4 Solanum lycopersicum HOM05D000424 ORTHO05D000355 9.7e-22 106.7 62 77.4
Atru.BG.232.p Acer truncatum HOM05D000424 ORTHO05D000355 2.2e-21 105.5 60 81.7
Peaxi162Scf00174g00073 Petunia axillaris HOM05D000424 ORTHO05D000355 2.2e-21 105.5 61 78.7
Cc09_g06050 Coffea canephora HOM05D000424 ORTHO05D000355 3.7e-21 104.8 61 78.7
CDE06G0674 Ceratophyllum demersum HOM05D000424 ORTHO05D000355 4.8e-21 104.4 62 75.8
Cfa014006 Carpinus fangiana HOM05D000424 ORTHO05D000355 1.4e-20 102.8 58 86.2
Haze_22701 Corylus avellana HOM05D000424 ORTHO05D000355 1.4e-20 102.8 58 86.2
Sc26g0004470 Simmondsia chinensis HOM05D000424 ORTHO05D000355 1.8e-20 102.4 62 80.6
COL.COLO4_26085 Corchorus olitorius HOM05D000424 ORTHO05D000355 2.4e-20 102.1 61 78.7
ATR0580G328 Amborella trichopoda HOM05D000424 ORTHO05D000355 4.1e-20 101.3 63 71.4
Actinidia29766 Actinidia chinensis HOM05D000424 ORTHO05D000355 5.3e-20 100.9 61 78.7
Cpa.g.sc26.266 Carica papaya HOM05D000424 ORTHO05D000355 5.3e-20 100.9 63 74.6
CARHR020780 Cardamine hirsuta HOM05D000424 ORTHO05D000355 9.0e-20 100.1 59 79.7
Thecc.08G051600 Theobroma cacao HOM05D000424 ORTHO05D000355 1.2e-19 99.8 60 80.0
Lj4A17T58 Lonicera japonica HOM05D027493 ORTHO05D028430 2.0e-19 99.0 60 78.3
AL1G33130 Arabidopsis lyrata HOM05D000424 ORTHO05D000355 3.4e-19 98.2 60 75.0
Psat5g012240 Pisum sativum HOM05D000424 ORTHO05D000355 1.3e-18 96.3 64 73.4
Lj4C17T15 Lonicera japonica HOM05D000424 ORTHO05D000355 2.9e-18 95.1 52 92.3
Ah.00g000680 Amaranthus hybridus HOM05D000424 ORTHO05D000355 8.5e-18 93.6 63 73.0
arahy.Tifrunner.gnm1.ann1.DMCY37 Arachis hypogaea HOM05D000424 ORTHO05D000355 4.2e-17 91.3 60 71.7
THA.LOC104809641 Tarenaya hassleriana HOM05D000424 ORTHO05D000355 4.2e-17 91.3 60 73.3
EL10Ac1g01607 Beta vulgaris HOM05D000424 ORTHO05D000355 5.5e-17 90.9 60 71.7
Oeu014026.1 Olea europaea HOM05D000424 ORTHO05D000355 9.3e-17 90.1 61 70.5
Lalb_Chr23g0266001 Lupinus albus HOM05D000424 ORTHO05D000355 3.6e-16 88.2 61 70.5
Os09g0542800 Oryza sativa ssp. japonica HOM05D000424 ORTHO05D000355 7.9e-16 87.0 65 60.0
AUR62013885 Chenopodium quinoa HOM05D000424 ORTHO05D000355 2.3e-15 85.5 63 65.1
Medtr3g114700 Medicago truncatula HOM05D000424 ORTHO05D000355 2.3e-15 85.5 61 68.9
AUR62036712 Chenopodium quinoa HOM05D000424 ORTHO05D000355 8.8e-15 83.6 63 63.5
TWI12G1155 Tripterygium wilfordii HOM05D000424 ORTHO05D000355 1.5e-14 82.8 51 80.4
PSO541G5032 Papaver somniferum HOM05D000424 ORTHO05D000355 5.7e-14 80.9 59 64.4
Ca_15467_v3 Cicer arietinum L. HOM05D000424 ORTHO05D000355 9.7e-14 80.1 47 80.9
Zm00001eb103960 Zea mays HOM05D000424 ORTHO05D000355 9.7e-14 80.1 62 59.7
SalBow7G3167 Salvia bowleyana HOM05D000424 ORTHO05D000355 1.4e-12 76.3 48 72.9
Migut.C00898 Erythranthe guttata HOM05D000424 ORTHO05D000355 1.8e-12 75.9 47 78.7
Sed0024891 Sechium edule HOM05D000424 ORTHO05D000355 4.1e-12 74.7 45 80.0
Gohir.A05G183000 Gossypium hirsutum HOM05D000424 ORTHO05D000355 5.3e-12 74.3 47 78.7
Gorai.009G191300 Gossypium raimondii HOM05D000424 ORTHO05D000355 5.3e-12 74.3 47 78.7
Carub.0001s1980 Capsella rubella HOM05D027493 ORTHO05D028430 6.9e-12 73.9 47 76.6
Duzib093G0301 Durio zibethinus HOM05D000424 ORTHO05D000355 9.1e-12 73.6 47 78.7
Glyma.06G020900 Glycine max HOM05D000424 ORTHO05D000355 1.5e-11 72.8 47 74.5
Sp1g18030 Schrenkiella parvula HOM05D000424 ORTHO05D000355 1.5e-11 72.8 47 76.6
AT1G20300 Arabidopsis thaliana HOM05D000424 ORTHO05D000355 2.0e-11 72.4 47 74.5
BcaB07g32035 Brassica carinata HOM05D000424 ORTHO05D000355 2.0e-11 72.4 47 76.6
A06p16380 Brassica napus HOM05D000424 ORTHO05D000355 2.0e-11 72.4 47 76.6
BolC5t30587H Brassica oleracea HOM05D000424 ORTHO05D000355 2.0e-11 72.4 47 76.6
BcaC05g25930 Brassica carinata HOM05D000424 ORTHO05D000355 2.6e-11 72.0 46 76.1
C05p18820 Brassica napus HOM05D000424 ORTHO05D000355 2.6e-11 72.0 46 76.1
BraA06t24742Z Brassica rapa HOM05D000424 ORTHO05D000355 3.4e-11 71.6 47 76.6
Nitab4.5_0003030g0120 Nicotiana tabacum HOM05D000424 ORTHO05D000355 4.5e-11 71.2 47 68.1
Phvul.009G019800 Phaseolus vulgaris HOM05D000424 ORTHO05D000355 5.9e-11 70.9 47 72.3
ClCG05G015430 Citrullus lanatus HOM05D000424 ORTHO05D000355 1.0e-10 70.1 44 77.3
Manes.05G142800 Manihot esculenta HOM05D000424 ORTHO05D000355 1.3e-10 69.7 49 71.4
Lj1g0014036 Lotus japonicus HOM05D000424 ORTHO05D000355 3.8e-10 68.2 47 74.5
TWI36G0926 Tripterygium wilfordii HOM05D000424 ORTHO05D000355 3.8e-10 68.2 47 76.6
VMungo1309G1540 Vigna mungo HOM05D000424 ORTHO05D000355 8.5e-10 67.0 47 72.3
SGA_v2.0_scaffold292G47396 Striga asiatica HOM05D000424 ORTHO05D000355 1.1e-09 66.6 45 71.1
MELO3C003729.2 Cucumis melo HOM05D000424 ORTHO05D000355 1.4e-09 66.2 47 70.2
PSO675G1088 Papaver somniferum HOM05D000424 ORTHO05D000355 2.5e-09 65.5 50 64.0
PSO541G2673 Papaver somniferum HOM05D000424 ORTHO05D000355 7.2e-09 63.9 49 63.3
TPR.G38108 Trifolium pratense HOM05D000424 ORTHO05D000355 1.2e-08 63.2 48 68.8
SEGI_34039 Sequoiadendron giganteum HOM05D000424 ORTHO05D000355 7.4e-06 53.9 40 62.5


User provided reference genes

Program Settings