Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 9.1e-110 400.2 196 100.0
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 2.0e-104 382.5 195 95.4
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-102 376.7 194 95.4
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.1e-94 350.1 174 96.6
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 2.5e-83 312.4 156 95.5
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 9.5e-75 283.9 181 74.0
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.9e-71 272.3 183 71.0
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 9.2e-70 267.3 181 68.5
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 2.1e-69 266.2 181 67.4
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 3.0e-68 262.3 181 66.3
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 3.0e-68 262.3 181 66.9
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 5.0e-68 261.5 181 66.3
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 6.6e-68 261.2 181 65.7
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 6.6e-68 261.2 181 65.7
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 3.3e-67 258.8 181 65.2
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.6e-66 256.5 201 58.2
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 3.6e-66 255.4 181 65.2
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 4.7e-66 255.0 183 63.9
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 6.2e-66 254.6 181 66.9
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 1.1e-65 253.8 175 65.7
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 1.1e-65 253.8 175 66.9
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 4.0e-65 251.9 181 63.0
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 4.0e-65 251.9 181 65.2
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 6.8e-65 251.1 183 62.8
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 8.9e-65 250.8 181 64.1
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 8.9e-65 250.8 183 62.8
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 1.5e-64 250.0 183 63.4
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 2.0e-64 249.6 175 65.7
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 5.8e-64 248.1 181 64.1
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 2.2e-63 246.1 183 62.3
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 3.7e-63 245.4 183 61.2
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 4.9e-63 245.0 194 61.9
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 8.3e-63 244.2 183 62.8
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 1.1e-62 243.8 175 65.1
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 1.1e-62 243.8 175 64.0
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 1.9e-62 243.0 183 63.4
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 1.9e-62 243.0 183 62.8
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 2.4e-62 242.7 183 59.6
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 2.4e-62 242.7 183 62.8
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 3.2e-62 242.3 184 62.5
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 4.1e-62 241.9 182 64.3
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 4.1e-62 241.9 170 64.1
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 7.1e-62 241.1 174 64.9
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 9.2e-62 240.7 181 61.3
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 9.2e-62 240.7 174 65.5
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 9.2e-62 240.7 183 62.3
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 1.2e-61 240.4 174 65.5
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 1.2e-61 240.4 177 63.3
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 2.7e-61 239.2 173 63.0
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 2.7e-61 239.2 183 62.3
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 3.5e-61 238.8 183 61.7
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 3.5e-61 238.8 173 64.2
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 3.5e-61 238.8 183 61.7
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 3.5e-61 238.8 183 61.7
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 7.8e-61 237.7 174 61.5
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 1.0e-60 237.3 183 62.8
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.7e-60 236.5 174 64.4
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.7e-60 236.5 174 64.4
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 1.7e-60 236.5 183 61.2
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 2.3e-60 236.1 183 61.2
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.3e-60 236.1 174 63.2
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 3.0e-60 235.7 174 64.4
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 3.0e-60 235.7 174 62.6
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.9e-60 235.3 174 63.8
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 3.9e-60 235.3 174 62.6
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 5.1e-60 235.0 183 59.0
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 5.1e-60 235.0 183 61.7
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 5.1e-60 235.0 174 63.2
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.1e-60 235.0 174 63.8
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 6.6e-60 234.6 181 63.0
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 8.6e-60 234.2 183 60.1
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 1.1e-59 233.8 183 59.0
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 1.9e-59 233.0 174 60.9
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 1.9e-59 233.0 174 60.9
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 5.6e-59 231.5 174 59.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 5.6e-59 231.5 174 59.8
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 5.6e-59 231.5 172 62.8
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 1.2e-58 230.3 188 59.6
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.6e-58 229.9 174 60.9
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.1e-58 229.6 174 63.2
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 2.8e-58 229.2 174 60.9
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 3.6e-58 228.8 183 57.4
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.6e-58 228.8 174 60.3
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 4.7e-58 228.4 174 60.9
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 6.2e-58 228.0 183 60.1
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 8.1e-58 227.6 174 60.3
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-57 227.3 174 58.6
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.1e-57 227.3 174 58.6
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 1.1e-57 227.3 183 59.6
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 1.4e-57 226.9 193 57.0
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 2.4e-57 226.1 174 58.6
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 5.2e-57 224.9 174 58.0
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 2.6e-56 222.6 183 59.6
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 9.9e-56 220.7 174 58.6
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 2.9e-55 219.2 174 58.6
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 8.4e-55 217.6 174 58.6
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 1.9e-54 216.5 184 57.1
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 3.2e-54 215.7 190 55.8
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 2.7e-53 212.6 154 63.6
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 3.0e-52 209.1 189 55.6
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 1.6e-50 203.4 175 57.1
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 2.8e-50 202.6 152 61.2
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 3.4e-48 195.7 189 51.3
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 1.7e-47 193.4 186 50.5
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 1.1e-46 190.7 140 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 2.4e-46 189.5 180 51.1
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 2.3e-44 183.0 176 49.4
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.6e-43 178.3 126 64.3
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.6e-43 178.3 126 64.3
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.6e-43 178.3 126 64.3
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.6e-43 178.3 126 64.3
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 3.4e-40 169.1 181 48.6
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 7.6e-40 167.9 184 45.1
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.1e-35 154.1 98 67.3
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 1.6e-34 150.2 117 62.4
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 3.8e-31 139.0 94 68.1
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 2.8e-26 122.9 88 61.4
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 4.9e-23 112.1 135 43.7
DCAR_030105 Daucus carota HOM05D002465 ORTHO05D005308 1.4e-17 94.0 108 52.8
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.4e-17 93.2 69 60.9
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 4.1e-17 92.4 134 38.8
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 4.1e-09 65.9 107 32.7
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 1.7e-07 60.5 57 47.4
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 2.2e-07 60.1 38 63.2
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 4.2e-06 55.8 90 34.4


User provided reference genes

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