Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 7.5e-154 547.4 320 100.0
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 3.0e-54 216.5 325 51.4
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 6.8e-46 188.7 346 44.2
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 1.5e-45 187.6 316 49.7
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.5e-37 161.0 320 42.5
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 3.2e-35 153.3 321 41.4
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 1.3e-33 147.9 332 47.3
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 2.3e-33 147.1 322 41.0
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.5e-32 143.7 332 40.7
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 2.5e-32 143.7 332 40.7
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 3.3e-32 143.3 329 41.9
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 5.6e-32 142.5 312 41.3
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 1.2e-31 141.4 326 39.6
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.6e-31 141.0 313 36.4
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 4.7e-31 139.4 315 39.0
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 8.1e-31 138.7 321 45.8
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 8.1e-31 138.7 332 40.1
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 1.4e-30 137.9 324 43.8
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 3.1e-30 136.7 272 43.8
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 5.2e-30 136.0 350 40.3
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 1.2e-29 134.8 319 43.3
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 1.2e-29 134.8 315 37.8
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 1.5e-29 134.4 327 41.6
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 2.6e-29 133.7 329 47.4
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.4e-29 133.3 341 42.8
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 4.4e-29 132.9 312 38.5
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 5.8e-29 132.5 312 36.9
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 5.8e-29 132.5 335 37.9
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 7.5e-29 132.1 322 38.8
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 9.9e-29 131.7 342 40.4
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 1.3e-28 131.3 330 37.3
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 1.7e-28 131.0 330 39.7
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.7e-28 131.0 339 42.2
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 1.7e-28 131.0 330 45.8
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.9e-28 129.4 309 39.8
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 4.9e-28 129.4 309 39.8
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 6.4e-28 129.0 310 38.4
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 8.3e-28 128.6 322 38.2
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 1.1e-27 128.3 339 42.2
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.1e-27 128.3 339 42.2
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.9e-27 127.5 344 43.3
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 1.9e-27 127.5 328 42.7
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 2.4e-27 127.1 330 40.3
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 2.4e-27 127.1 349 37.2
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 5.4e-27 125.9 352 36.4
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 7.1e-27 125.6 337 43.6
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 1.2e-26 124.8 311 36.3
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 1.6e-26 124.4 348 35.9
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.6e-26 124.4 268 40.3
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 4.6e-26 122.9 343 38.5
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.0e-25 121.7 320 34.7
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.0e-25 121.7 322 36.6
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.3e-25 121.3 321 36.1
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 1.7e-25 120.9 362 36.5
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 2.3e-25 120.6 330 41.5
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 3.9e-25 119.8 337 37.1
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.9e-25 119.8 315 44.1
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 5.1e-25 119.4 320 37.5
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 6.6e-25 119.0 356 35.7
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 6.6e-25 119.0 320 35.9
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 2.5e-24 117.1 342 35.7
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 2.5e-24 117.1 338 40.5
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 9.5e-24 115.2 320 37.8
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 1.6e-23 114.4 317 38.2
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 1.6e-23 114.4 316 35.8
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 1.6e-23 114.4 316 35.8
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 2.8e-23 113.6 336 35.7
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 2.8e-23 113.6 290 38.3
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.1e-22 111.7 320 34.7
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.1e-22 111.7 313 32.9
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 1.1e-22 111.7 322 35.7
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 3.1e-22 110.2 338 37.0
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 3.1e-22 110.2 307 35.5
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 6.8e-22 109.0 325 33.8
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 1.2e-21 108.2 347 36.9
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.5e-21 107.8 326 35.9
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 2.0e-21 107.5 324 34.3
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 2.0e-21 107.5 329 35.3
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.0e-21 107.5 313 33.5
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 2.0e-21 107.5 339 39.5
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 2.6e-21 107.1 327 38.8
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 4.4e-21 106.3 339 32.7
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 5.8e-21 105.9 337 36.2
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 5.8e-21 105.9 313 34.2
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.3e-20 104.8 296 34.5
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 2.2e-20 104.0 338 36.7
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 2.2e-20 104.0 336 39.0
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 3.8e-20 103.2 345 32.2
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 8.4e-20 102.1 308 34.1
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 1.4e-19 101.3 346 41.0
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 2.4e-19 100.5 226 39.8
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 7.1e-19 99.0 328 38.4
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 1.6e-18 97.8 323 39.0
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.6e-18 97.8 316 32.6
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 2.7e-18 97.1 324 33.0
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 6.0e-18 95.9 193 38.3
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 6.0e-18 95.9 331 40.8
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 6.0e-18 95.9 331 40.8
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 6.0e-18 95.9 331 40.8
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 1.7e-17 94.4 353 30.3
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 1.1e-16 91.7 325 34.5
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 1.5e-16 91.3 318 35.2
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 5.6e-16 89.4 344 37.2
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 2.8e-15 87.0 314 39.2
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 3.6e-15 86.7 124 48.4
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 8.1e-15 85.5 321 38.0
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 8.1e-15 85.5 321 34.6
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 1.1e-14 85.1 325 32.3
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.1e-14 85.1 309 37.5
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.4e-14 84.7 307 36.2
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 2.4e-14 84.0 304 43.1
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 4.4e-13 79.7 359 30.6
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 2.2e-12 77.4 365 31.8
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 2.9e-12 77.0 320 30.6
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 4.9e-12 76.3 335 31.6
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 8.4e-12 75.5 310 38.4
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.1e-11 75.1 143 41.3
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.4e-11 74.7 326 39.0
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.9e-11 74.3 250 34.4
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 2.4e-11 73.9 333 31.2
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 3.5e-10 70.1 323 38.7
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 3.5e-10 70.1 321 38.0
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 4.6e-10 69.7 317 38.2
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 6.0e-10 69.3 317 30.6
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 1.0e-09 68.6 312 37.5
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 1.3e-09 68.2 317 37.2
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 1.7e-09 67.8 326 38.3
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 2.3e-09 67.4 316 38.6
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 2.3e-09 67.4 269 39.4
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 3.0e-09 67.0 319 38.6
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 3.9e-09 66.6 323 38.4
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 3.9e-09 66.6 323 38.4
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 3.9e-09 66.6 328 34.1
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 6.6e-09 65.9 312 38.8
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 8.7e-09 65.5 319 38.2
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 1.9e-08 64.3 326 36.2
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 3.3e-08 63.5 316 38.0
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 4.3e-08 63.2 322 36.3
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 5.6e-08 62.8 319 36.7
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 1.3e-07 61.6 285 37.5
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 6.2e-07 59.3 322 36.3
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 1.4e-06 58.2 292 26.7


User provided reference genes

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