Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.1e-120 436.8 252 100.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.4e-99 366.7 232 91.8
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 2.9e-60 236.1 283 48.4
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 5.0e-60 235.3 274 50.4
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.9e-59 233.4 272 50.0
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 3.7e-55 219.2 272 48.5
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.3e-54 215.3 273 48.4
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 7.0e-54 214.9 272 47.1
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 9.1e-54 214.5 273 48.4
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.6e-53 213.8 272 46.7
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.5e-53 212.6 274 46.7
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 3.5e-53 212.6 272 47.8
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 2.2e-52 209.9 272 46.7
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 6.5e-52 208.4 278 47.1
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 8.5e-52 208.0 272 46.7
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 8.5e-52 208.0 293 46.8
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.1e-51 207.6 272 46.3
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.5e-51 207.2 278 46.0
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.5e-51 207.2 272 46.7
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.5e-51 206.5 274 46.4
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 3.2e-51 206.1 273 46.5
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 5.5e-51 205.3 283 45.2
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 7.2e-51 204.9 271 46.5
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.4e-51 204.5 273 46.2
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.4e-51 204.5 273 46.2
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 9.4e-51 204.5 272 47.1
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.2e-50 204.1 278 46.0
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.6e-50 202.6 234 50.4
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.6e-50 202.6 276 46.7
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 6.1e-50 201.8 312 44.2
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 6.1e-50 201.8 273 45.8
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.0e-49 201.1 272 45.6
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 2.3e-49 199.9 272 46.3
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 4.0e-49 199.1 275 46.2
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 4.0e-49 199.1 275 44.7
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 4.0e-49 199.1 275 44.7
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.5e-48 197.2 273 46.2
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 3.4e-48 196.1 273 44.7
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 4.4e-48 195.7 277 45.5
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 9.7e-48 194.5 273 44.7
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 9.7e-48 194.5 273 44.7
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 1.7e-47 193.7 291 44.3
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.7e-47 193.7 272 45.6
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.8e-47 193.0 291 44.3
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 4.8e-47 192.2 273 43.6
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 6.3e-47 191.8 273 44.3
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 8.3e-47 191.4 284 45.8
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.1e-46 191.0 272 44.1
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 3.1e-46 189.5 289 43.6
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.1e-46 189.5 273 44.3
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.7e-45 186.4 227 50.2
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 3.5e-45 186.0 291 44.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 4.5e-45 185.7 273 52.4
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 4.5e-45 185.7 276 49.3
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.0e-44 184.5 277 49.5
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.7e-44 183.7 266 44.4
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 3.8e-44 182.6 275 44.7
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 6.5e-44 181.8 280 44.6
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 8.5e-44 181.4 273 42.1
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.5e-43 180.6 274 42.3
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.5e-43 180.6 272 47.4
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 1.5e-43 180.6 292 41.4
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.5e-43 179.9 225 46.2
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 7.2e-43 178.3 291 40.9
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 9.4e-43 177.9 307 40.4
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 1.4e-41 174.1 291 42.3
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 5.2e-41 172.2 274 40.9
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 5.2e-41 172.2 246 45.9
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.2e-40 171.0 279 41.2
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.2e-40 171.0 274 42.0
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 3.4e-40 169.5 252 45.2
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 5.7e-40 168.7 272 41.5
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 8.3e-39 164.9 262 41.6
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.1e-38 164.5 272 43.8
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 2.4e-38 163.3 290 39.3
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 3.1e-38 162.9 284 40.8
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 4.5e-37 159.1 279 47.0
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 2.9e-36 156.4 273 38.8
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.1e-35 154.5 276 39.9
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 1.1e-35 154.5 274 38.3
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.5e-35 153.3 260 41.5
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 4.2e-35 152.5 287 46.0
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.8e-33 147.1 249 41.4
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 2.3e-33 146.7 289 46.4
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 6.8e-33 145.2 282 40.8
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.2e-32 144.4 284 41.2
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 2.0e-32 143.7 253 39.9
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 3.4e-32 142.9 278 43.9
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 2.8e-31 139.8 274 37.2
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 4.5e-29 132.5 236 39.4
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 2.3e-28 130.2 291 36.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.6e-26 122.9 251 37.8
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.0e-25 121.3 147 46.9
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.8e-25 120.6 262 37.4
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 3.4e-24 116.3 320 33.8
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 3.4e-24 116.3 170 42.4
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.9e-22 110.5 234 37.6
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 5.4e-22 109.0 287 34.5
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 5.0e-20 102.4 242 33.9
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.6e-18 97.4 318 30.5
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 6.2e-18 95.5 173 51.4
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 6.8e-17 92.0 176 42.6
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 6.4e-15 85.5 130 40.0
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.4e-14 83.6 254 29.5
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 7.1e-14 82.0 336 26.2
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 6.0e-13 79.0 113 41.6
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.9e-11 73.9 188 34.6
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 4.4e-08 62.8 35 71.4
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 8.3e-07 58.5 91 44.0


User provided reference genes

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