Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029909 Daucus carota HOM05D006022 ORTHO05D007649 0.0e+00 2117.0 1116 100.0
Dinv38822 Davidia involucrata HOM05D006022 ORTHO05D007406 4.5e-230 802.4 1130 48.2
Lj2A165T43 Lonicera japonica HOM05D006022 ORTHO05D007649 1.2e-227 794.3 1144 48.6
Actinidia22171 Actinidia chinensis HOM05D006022 ORTHO05D007649 3.0e-218 763.1 1100 47.5
Hma1.2p1_0359F.1_g135140 Hydrangea macrophylla HOM05D006022 ORTHO05D007649 2.8e-216 756.5 1076 47.6
vmacro11345 Vaccinium macrocarpon HOM05D006022 ORTHO05D007649 4.6e-206 722.6 1080 46.1
RhsimUnG0007600 Rhododendron simsii HOM05D006022 ORTHO05D007649 1.3e-205 721.1 1091 45.9
GSVIVG01019556001 Vitis vinifera HOM05D006022 ORTHO05D007649 5.0e-205 719.2 1078 47.6
Rhsim02G0245100 Rhododendron simsii HOM05D006022 ORTHO05D007649 1.5e-204 717.6 1095 45.5
Nitab4.5_0004515g0030 Nicotiana tabacum HOM05D006022 ORTHO05D007649 1.1e-202 711.4 923 50.7
Cc08_g16230 Coffea canephora HOM05D006022 ORTHO05D007649 1.8e-202 710.7 1101 46.0
COL.COLO4_10720 Corchorus olitorius HOM05D006022 ORTHO05D007649 3.1e-202 709.9 918 50.5
QL02p030100 Quercus lobata HOM05D006022 ORTHO05D007649 3.1e-202 709.9 914 49.8
Thecc.03G300300 Theobroma cacao HOM05D006022 ORTHO05D007649 3.1e-202 709.9 918 50.7
CiPaw.12G081600 Carya illinoinensis HOM05D006022 ORTHO05D007649 5.8e-201 705.7 1092 44.4
Cpa.g.sc79.13 Carica papaya HOM05D006022 ORTHO05D007649 7.8e-198 695.3 916 48.8
Cfa011987 Carpinus fangiana HOM05D006022 ORTHO05D007649 7.3e-196 688.7 1102 43.7
MSTRG.1801 Avicennia marina HOM05D006022 ORTHO05D007649 8.1e-195 685.3 891 47.6
ECA233G0648 Erigeron canadensis HOM05D006022 ORTHO05D007649 1.2e-193 681.4 1075 44.7
Potri.001G089900 Populus trichocarpa HOM05D006022 ORTHO05D007649 2.0e-193 680.6 833 50.3
TWI81G0375 Tripterygium wilfordii HOM05D006022 ORTHO05D007649 3.2e-191 673.3 895 49.3
Sopen12g024380 Solanum pennellii HOM05D006022 ORTHO05D007649 7.1e-191 672.2 1088 43.6
CAN.G390.10 Capsicum annuum HOM05D006022 ORTHO05D007649 1.2e-190 671.4 1093 44.2
Sabra01G0066300 Salix brachista HOM05D006022 ORTHO05D007649 1.2e-190 671.4 923 47.0
Peaxi162Scf00117g00919 Petunia axillaris HOM05D006022 ORTHO05D007649 1.6e-190 671.0 903 48.7
Ciclev10018527m.g Citrus clementina HOM05D006022 ORTHO05D007649 7.8e-190 668.7 982 45.4
Nitab4.5_0004010g0010 Nicotiana tabacum HOM05D006022 ORTHO05D007649 5.1e-189 666.0 1104 44.7
Haze_09085 Corylus avellana HOM05D006022 ORTHO05D007649 1.5e-188 664.5 1204 40.7
Duzib084G0652 Durio zibethinus HOM05D006022 ORTHO05D007649 1.9e-188 664.1 923 48.2
Gorai.004G132300 Gossypium raimondii HOM05D006022 ORTHO05D007649 9.5e-188 661.8 911 48.5
Gohir.D08G125400 Gossypium hirsutum HOM05D006022 ORTHO05D007649 1.1e-186 658.3 911 48.3
Nn1g00246 Nelumbo nucifera HOM05D006022 ORTHO05D007649 1.8e-186 657.5 922 47.3
HanXRQChr10g0316931 Helianthus annuus HOM05D006022 ORTHO05D007649 2.4e-186 657.1 1074 42.8
Gohir.A08G112400 Gossypium hirsutum HOM05D006022 ORTHO05D007649 8.9e-186 655.2 913 48.1
Solyc12g055910.3 Solanum lycopersicum HOM05D006022 ORTHO05D007649 2.0e-185 654.1 1123 42.6
RcHm_v2.0_Chr7g0194241 Rosa chinensis HOM05D006022 ORTHO05D007649 2.6e-185 653.7 1127 42.5
Prupe.5G122300 Prunus persica HOM05D006022 ORTHO05D007649 9.9e-185 651.7 915 47.4
MD06G1109300 Malus domestica HOM05D006022 ORTHO05D007649 1.7e-184 651.0 875 47.9
MD14G1130300 Malus domestica HOM05D006022 ORTHO05D007649 4.1e-183 646.4 1154 41.9
TAR375G1078 Trochodendron aralioides HOM05D006022 ORTHO05D007649 5.4e-183 646.0 1136 42.4
FAN18G3678 Fragaria x ananassa HOM05D006022 ORTHO05D007649 6.0e-182 642.5 902 46.0
CANSAT21G0687 Cannabis sativa HOM05D006022 ORTHO05D007649 2.3e-181 640.6 1074 42.6
FvH4_5g04850 Fragaria vesca HOM05D006022 ORTHO05D007649 2.3e-181 640.6 903 46.1
Glyma.05G217800 Glycine max HOM05D006022 ORTHO05D007649 3.3e-180 636.7 1059 43.6
Glyma.08G023800 Glycine max HOM05D006022 ORTHO05D007649 8.1e-179 632.1 1122 42.7
Lj4g0024036 Lotus japonicus HOM05D006022 ORTHO05D007649 8.1e-179 632.1 912 46.6
FAN04G2854 Fragaria x ananassa HOM05D006022 ORTHO05D007649 1.1e-178 631.7 1115 41.0
Lsat_1_v5_gn_6_8380 Lactuca sativa HOM05D006022 ORTHO05D007649 1.1e-178 631.7 878 47.7
Phvul.002G299600 Phaseolus vulgaris HOM05D006022 ORTHO05D007649 6.9e-178 629.0 1044 43.5
FAN18G0793 Fragaria x ananassa HOM05D006022 ORTHO05D007649 1.4e-175 621.3 1114 40.6
SGA_v2.0_scaffold111G31401 Striga asiatica HOM05D006022 ORTHO05D007649 1.6e-174 617.8 1078 41.9
VMungo0251G1998 Vigna mungo HOM05D006022 ORTHO05D007649 2.7e-174 617.1 1091 43.4
Migut.E01259 Erythranthe guttata HOM05D006022 ORTHO05D007649 1.7e-173 614.4 1061 41.6
Medtr8g099585 Medicago truncatula HOM05D006022 ORTHO05D007649 1.7e-173 614.4 928 46.2
Ca_17472_v3 Cicer arietinum L. HOM05D006022 ORTHO05D007649 5.6e-172 609.4 904 45.6
Aqoxy5G04291 Aquilegia oxysepala HOM05D006022 ORTHO05D007649 4.8e-171 606.3 883 46.8
Psat7g023280 Pisum sativum HOM05D006022 ORTHO05D007649 4.5e-169 599.7 1095 41.4
Hund14211 Selenicereus undatus HOM05D006022 ORTHO05D007649 1.7e-168 597.8 906 45.7
Manes.01G050200 Manihot esculenta HOM05D006022 ORTHO05D007649 2.9e-168 597.0 1092 40.7
arahy.Tifrunner.gnm1.ann1.DK6PZW Arachis hypogaea HOM05D006022 ORTHO05D007649 3.8e-168 596.7 1140 40.8
arahy.Tifrunner.gnm1.ann1.MN1JRI Arachis hypogaea HOM05D006022 ORTHO05D007649 4.9e-168 596.3 1130 41.2
PGR042G3794 Punica granatum HOM05D006022 ORTHO05D007649 1.4e-167 594.7 899 44.3
TPR.G3389 Trifolium pratense HOM05D006022 ORTHO05D007649 2.1e-166 590.9 1097 40.9
THA.LOC104807002 Tarenaya hassleriana HOM05D006022 ORTHO05D007649 4.6e-166 589.7 915 44.0
Lalb_Chr05g0224031 Lupinus albus HOM05D006022 ORTHO05D007649 3.0e-165 587.0 871 46.0
MBI07_g39841_MAGBIO Magnolia biondii HOM05D006022 ORTHO05D007649 3.3e-164 583.6 941 43.9
Sed0008879 Sechium edule HOM05D006022 ORTHO05D007649 2.1e-163 580.9 1018 41.5
ClCG01G001730 Citrullus lanatus HOM05D006022 ORTHO05D007649 8.1e-163 578.9 1094 41.3
AUR62010858 Chenopodium quinoa HOM05D006022 ORTHO05D007649 1.1e-162 578.6 965 42.6
EL10Ac5g12933 Beta vulgaris HOM05D006022 ORTHO05D007649 2.4e-162 577.4 912 44.5
PSO170G1024 Papaver somniferum HOM05D006022 ORTHO05D007649 4.5e-161 573.2 1085 41.1
MELO3C005765.2 Cucumis melo HOM05D006022 ORTHO05D007649 1.1e-159 568.5 1060 40.7
CsaV3_5G001870 Cucumis sativus L. HOM05D006022 ORTHO05D007649 5.5e-159 566.2 1149 38.6
Ah.07g197550 Amaranthus hybridus HOM05D006022 ORTHO05D007649 1.2e-158 565.1 847 45.3
Atru.chr9.1963 Acer truncatum HOM05D006022 ORTHO05D007649 1.1e-156 558.5 1020 41.7
CSS0021468 Camellia sinensis var. sinensis HOM05D006022 ORTHO05D007649 1.1e-156 558.5 807 46.7
AT4G10930 Arabidopsis thaliana HOM05D006022 ORTHO05D007649 9.6e-156 555.4 846 44.8
AL6G45030 Arabidopsis lyrata HOM05D006022 ORTHO05D007649 5.3e-154 549.7 838 44.4
CARHR255670 Cardamine hirsuta HOM05D006022 ORTHO05D007649 1.3e-152 545.0 793 45.5
Eucgr.E00880 Eucalyptus grandis HOM05D006022 ORTHO05D007649 1.9e-151 541.2 867 44.2
Sp6g06550 Schrenkiella parvula HOM05D006022 ORTHO05D007649 1.9e-151 541.2 822 45.6
Carub.0006s2968 Capsella rubella HOM05D006022 ORTHO05D007649 4.2e-151 540.0 848 44.1
A03p29210 Brassica napus HOM05D006022 ORTHO05D007649 6.0e-150 536.2 912 42.3
AUR62019856 Chenopodium quinoa HOM05D006022 ORTHO05D007649 7.9e-150 535.8 954 41.9
Thhalv10028398m.g Eutrema salsugineum HOM05D006022 ORTHO05D007649 1.0e-149 535.4 926 41.9
BraA03t12116Z Brassica rapa HOM05D006022 ORTHO05D007649 1.8e-149 534.6 912 42.2
BcaC01g04650 Brassica carinata HOM05D006022 ORTHO05D007649 3.9e-149 533.5 920 42.0
BolC3t15840H Brassica oleracea HOM05D006022 ORTHO05D007649 1.1e-148 531.9 913 42.2
C03p35290 Brassica napus HOM05D006022 ORTHO05D007649 5.7e-148 529.6 917 41.8
BcaB01g02727 Brassica carinata HOM05D006022 ORTHO05D007649 2.2e-147 527.7 910 41.5
unitig_26.g9566 Utricularia gibba HOM05D006022 ORTHO05D007649 1.1e-143 515.4 873 41.7
ATR0602G083 Amborella trichopoda HOM05D006022 ORTHO05D007649 2.0e-129 468.0 932 39.9
HPP92_009829 Vanilla planifolia HOM05D006022 ORTHO05D007649 2.6e-100 371.3 847 35.4
Duzib205G1781 Durio zibethinus HOM05D006022 ORTHO05D007649 1.7e-99 368.6 472 50.8
Zm00001eb209080 Zea mays HOM05D006022 ORTHO05D007649 8.6e-96 356.3 913 34.9
Oeu023154.1 Olea europaea HOM05D006022 ORTHO05D007649 6.6e-80 303.5 447 44.1
Sc22g0004920 Simmondsia chinensis HOM05D006022 ORTHO05D007649 3.4e-76 291.2 426 45.8
Oeu009975.1 Olea europaea HOM05D006022 ORTHO05D007649 4.4e-76 290.8 385 49.1
SEGI_16880 Sequoiadendron giganteum HOM05D006022 ORTHO05D007649 7.5e-76 290.0 745 34.6
Os12g0209700 Oryza sativa ssp. japonica HOM05D006022 ORTHO05D007649 9.2e-66 256.5 595 35.3
Sc22g0004930 Simmondsia chinensis HOM05D006022 ORTHO05D007649 4.6e-65 254.2 456 40.4
TPR.G40773 Trifolium pratense HOM05D006022 ORTHO05D007649 4.5e-52 211.1 263 49.0
SHI06973 Sapria himalayana HOM05D006022 ORTHO05D007649 4.2e-50 204.5 495 34.9
Pp3c6_15100 Physcomitrium patens HOM05D006022 ORTHO05D007649 1.2e-49 203.0 936 27.8
Mapoly0002s0107 Marchantia polymorpha HOM05D006022 ORTHO05D007649 3.5e-49 201.4 884 27.7
AagrBONN_evm.TU.Sc2ySwM_228.3550 Anthoceros agrestis HOM05D006022 ORTHO05D007649 1.9e-31 142.5 948 25.1
SMO364G0157 Selaginella moellendorffii HOM05D003349 ORTHO05D003898 1.9e-31 142.5 536 31.0
Actinidia11683 Actinidia chinensis HOM05D006022 ORTHO05D007649 2.0e-23 115.9 112 58.9
CBR_g31499 Chara braunii HOM05D006022 ORTHO05D007649 7.2e-10 70.9 152 34.2
TWI60G1065 Tripterygium wilfordii HOM05D006022 ORTHO05D007649 4.4e-07 61.6 157 34.4


User provided reference genes

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