Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 3.8e-312 1074.7 554 100.0
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 4.6e-191 671.8 515 68.9
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 1.4e-187 660.2 481 71.7
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 4.0e-187 658.7 500 69.2
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.5e-186 656.8 537 66.1
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 1.7e-185 653.3 457 72.4
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 1.1e-184 650.6 512 69.9
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 1.9e-184 649.8 535 64.1
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.4e-184 649.4 491 71.5
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 4.6e-183 645.2 482 68.7
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 7.8e-183 644.4 478 70.7
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 3.9e-182 642.1 546 63.0
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 1.9e-181 639.8 531 64.4
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.3e-181 639.0 515 68.0
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 3.3e-181 639.0 528 65.5
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 5.6e-181 638.3 509 66.0
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 2.8e-180 636.0 499 65.9
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.6e-180 635.6 463 73.0
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 8.1e-180 634.4 463 68.0
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 8.1e-180 634.4 479 67.4
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 5.3e-179 631.7 489 69.7
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 1.2e-178 630.6 521 65.1
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 2.6e-178 629.4 487 69.0
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 1.7e-177 626.7 525 64.8
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 1.7e-177 626.7 463 69.1
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 4.9e-177 625.2 465 68.6
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 4.9e-177 625.2 465 68.6
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 9.3e-176 620.9 471 67.5
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 1.2e-175 620.5 567 60.5
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.2e-175 620.5 490 65.5
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 4.6e-175 618.6 530 63.6
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 6.0e-175 618.2 471 67.1
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.7e-174 616.7 546 61.4
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 8.7e-174 614.4 537 62.4
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 2.5e-173 612.8 507 64.3
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 3.3e-173 612.5 519 63.4
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 4.3e-173 612.1 463 68.5
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 4.3e-173 612.1 522 61.5
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 1.3e-172 610.5 517 63.1
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.3e-172 610.5 565 62.1
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.6e-172 610.1 520 63.3
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 3.6e-172 609.0 524 62.0
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 3.1e-171 605.9 528 62.1
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 9.0e-171 604.4 535 63.2
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 5.8e-170 601.7 460 66.7
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 1.3e-169 600.5 485 63.5
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 4.9e-169 598.6 462 68.0
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 1.6e-167 593.6 463 64.8
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 2.7e-167 592.8 531 61.0
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 7.9e-167 591.3 524 59.9
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 7.9e-167 591.3 516 59.7
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 1.0e-166 590.9 489 63.2
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 1.1e-165 587.4 502 62.2
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 4.3e-165 585.5 528 60.0
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 5.6e-165 585.1 521 60.3
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 5.6e-165 585.1 499 63.7
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 5.6e-165 585.1 480 64.2
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 7.4e-165 584.7 496 62.5
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 7.4e-165 584.7 456 64.7
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 9.6e-165 584.3 477 61.6
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 1.6e-164 583.6 479 62.8
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 1.6e-164 583.6 521 60.7
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 4.8e-164 582.0 528 59.3
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 1.8e-163 580.1 496 61.9
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 3.1e-163 579.3 476 62.8
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.5e-162 577.0 555 59.6
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 2.6e-162 576.2 539 59.9
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 7.6e-162 574.7 530 57.9
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 2.5e-160 569.7 480 61.0
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 4.2e-160 568.9 493 60.6
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 3.0e-158 562.8 530 59.1
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 1.1e-157 560.8 471 62.6
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 2.5e-157 559.7 481 62.0
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 4.0e-155 552.4 401 70.8
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 4.9e-153 545.4 523 58.7
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 5.5e-152 542.0 428 63.8
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 7.1e-152 541.6 529 57.8
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 4.3e-149 532.3 463 60.5
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 1.4e-147 527.3 477 57.9
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 2.2e-145 520.0 517 58.6
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.9e-144 516.9 388 67.0
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 9.4e-144 514.6 503 58.1
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 3.0e-142 509.6 505 55.0
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 6.7e-142 508.4 544 55.1
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 5.7e-141 505.4 487 56.1
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 4.1e-139 499.2 502 57.4
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 1.3e-137 494.2 519 52.8
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 3.9e-134 482.6 517 56.1
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 4.8e-124 449.1 466 51.9
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 5.0e-121 439.1 462 51.7
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 4.7e-119 432.6 474 49.6
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 3.6e-111 406.4 285 71.2
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.4e-110 404.4 349 58.7
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 8.8e-110 401.7 491 47.3
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 2.3e-105 387.1 279 68.5
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 4.6e-90 336.3 470 44.3
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 7.3e-64 249.2 196 67.3
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 3.3e-56 223.8 238 54.6
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 8.1e-55 219.2 199 54.8
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 4.0e-54 216.9 214 53.3
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 7.6e-53 212.6 223 53.8
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 2.2e-52 211.1 211 57.3
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 3.9e-49 200.3 500 31.0
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 8.1e-47 192.6 194 52.6
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 5.3e-46 189.9 206 52.9
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 5.0e-36 156.8 172 52.9
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 4.2e-35 153.7 109 75.2
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 1.0e-33 149.1 212 44.3
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.0e-17 95.9 77 66.2
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 7.7e-13 79.7 53 81.1
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 1.3e-07 62.4 123 32.5
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 2.8e-07 61.2 123 31.7


User provided reference genes

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