Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.7e-204 715.7 335 100.0
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 4.0e-174 614.8 332 84.9
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 4.2e-171 604.7 332 83.1
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 3.5e-170 601.7 332 82.8
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 3.3e-168 595.1 321 84.1
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 5.6e-168 594.3 332 81.6
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.1e-167 592.4 332 82.2
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 4.8e-167 591.3 332 82.5
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 4.8e-167 591.3 332 80.7
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 1.8e-166 589.3 322 82.6
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 2.4e-166 589.0 317 83.6
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 2.4e-166 589.0 333 81.1
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 3.1e-166 588.6 328 81.1
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 4.0e-166 588.2 323 83.3
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 5.3e-166 587.8 337 80.1
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 5.3e-166 587.8 323 82.4
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 6.9e-166 587.4 323 82.4
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 9.0e-166 587.0 333 81.7
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.2e-165 586.6 332 80.4
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.5e-165 586.3 318 83.3
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.5e-165 586.3 332 80.4
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 2.0e-165 585.9 333 81.4
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 2.6e-165 585.5 317 83.3
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 3.4e-165 585.1 332 81.3
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 3.4e-165 585.1 323 83.0
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.5e-165 584.7 326 82.2
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.5e-165 584.7 322 83.2
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 5.8e-165 584.3 327 80.7
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 5.8e-165 584.3 334 81.4
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 7.6e-165 583.9 317 83.0
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.3e-164 583.2 323 81.1
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.3e-164 583.2 333 79.6
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.7e-164 582.8 322 82.6
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 1.7e-164 582.8 322 82.9
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 2.9e-164 582.0 323 83.3
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 2.9e-164 582.0 332 79.5
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 2.9e-164 582.0 332 80.4
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 3.8e-164 581.6 334 78.7
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 3.8e-164 581.6 329 81.2
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 3.8e-164 581.6 324 82.4
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 3.8e-164 581.6 333 79.3
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 4.9e-164 581.3 357 75.9
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 8.4e-164 580.5 332 80.7
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 1.1e-163 580.1 317 83.6
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.1e-163 580.1 354 76.3
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.1e-163 580.1 331 79.2
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.4e-163 579.7 326 81.6
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.4e-163 579.7 321 82.2
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 1.9e-163 579.3 330 80.6
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 3.2e-163 578.6 333 79.3
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 3.2e-163 578.6 334 79.6
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 3.2e-163 578.6 320 80.6
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 7.1e-163 577.4 317 82.0
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 9.3e-163 577.0 323 81.4
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 2.7e-162 575.5 323 79.9
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.7e-162 575.5 326 80.7
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.7e-162 575.5 328 80.5
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 3.5e-162 575.1 332 77.7
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 7.9e-162 573.9 334 78.7
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 1.0e-161 573.5 317 81.4
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 2.3e-161 572.4 324 79.9
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 3.0e-161 572.0 332 78.6
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 5.1e-161 571.2 320 79.7
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 6.7e-161 570.9 322 80.4
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 8.7e-161 570.5 320 79.7
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.1e-160 570.1 324 80.6
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 3.3e-160 568.5 328 79.3
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 3.3e-160 568.5 316 81.0
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 4.3e-160 568.2 320 79.4
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 4.3e-160 568.2 320 79.4
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 9.6e-160 567.0 336 80.1
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 2.1e-159 565.8 317 80.8
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 2.1e-159 565.8 336 78.6
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 3.6e-159 565.1 324 78.7
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.1e-159 563.9 349 75.6
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.4e-158 563.1 333 77.5
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.2e-157 560.1 334 76.9
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 2.0e-157 559.3 323 78.9
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 3.4e-157 558.5 317 79.8
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 2.2e-156 555.8 349 73.1
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 6.0e-154 547.7 318 78.6
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 3.0e-153 545.4 345 73.9
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.6e-149 532.3 300 80.3
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.4e-149 531.9 336 75.9
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 8.4e-148 527.3 356 71.3
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.1e-147 526.9 340 73.2
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 2.5e-147 525.8 285 81.4
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 9.3e-147 523.9 332 73.5
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.9e-144 516.2 328 74.1
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.9e-141 504.6 324 69.4
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 8.5e-140 500.7 317 71.0
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 3.2e-139 498.8 284 77.5
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.8e-137 493.0 333 69.4
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.1e-136 490.3 318 68.6
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.9e-136 489.6 319 68.3
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 3.1e-126 455.7 320 65.0
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 4.2e-123 445.3 565 45.0
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 7.0e-118 427.9 249 79.1
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.3e-103 380.6 267 67.8
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 5.9e-101 371.7 201 83.1
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 2.5e-99 366.3 287 62.4
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 3.0e-97 359.4 229 75.1
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 3.4e-88 329.3 354 43.8
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 6.6e-84 315.1 355 43.7
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.1e-81 306.2 305 48.2
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.2e-80 304.3 306 48.4
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.7e-68 263.8 167 76.0
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.6e-58 230.7 168 67.9
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 7.6e-56 221.9 182 57.7
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.1e-54 218.0 122 75.4
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.6e-53 214.2 363 35.5
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 7.3e-51 205.3 155 65.2
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 7.6e-48 195.3 204 51.5
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 7.1e-46 188.7 196 44.4
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 3.5e-29 133.3 87 70.1
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 3.9e-20 103.2 74 64.9
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.9e-15 87.0 84 46.4
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 3.3e-11 73.6 74 54.1
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 8.2e-10 68.9 36 75.0
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 7.0e-09 65.9 46 60.9
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 1.5e-08 64.7 116 32.8


User provided reference genes

Program Settings