Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029760 Daucus carota HOM05D002657 ORTHO05D003059 8.6e-38 160.2 106 100.0
DCAR_029761 Daucus carota HOM05D002657 ORTHO05D003059 1.6e-31 139.4 106 89.6
DCAR_029759 Daucus carota HOM05D002657 ORTHO05D003059 3.5e-23 111.7 96 71.9
Dinv29136 Davidia involucrata HOM05D002657 ORTHO05D003059 1.7e-17 92.8 93 57.0
Cc01_g00970 Coffea canephora HOM05D002657 ORTHO05D003059 1.4e-16 89.7 99 52.5
DCAR_029764 Daucus carota HOM05D002657 ORTHO05D003059 7.1e-16 87.4 80 65.0
DCAR_009021 Daucus carota HOM05D002657 ORTHO05D003059 3.5e-15 85.1 95 67.4
DCAR_029763 Daucus carota HOM05D002657 ORTHO05D003059 7.8e-15 84.0 95 56.8
Solyc06g072730.4 Solanum lycopersicum HOM05D002657 ORTHO05D003059 8.6e-14 80.5 99 45.5
Oeu007519.1 Olea europaea HOM05D002657 ORTHO05D003059 5.6e-13 77.8 99 45.5
Sopen06g029110 Solanum pennellii HOM05D002657 ORTHO05D003059 5.6e-13 77.8 99 44.4
MSTRG.7 Avicennia marina HOM05D002657 ORTHO05D003059 5.2e-11 71.2 81 50.6
Nitab4.5_0000021g0730 Nicotiana tabacum HOM05D002657 ORTHO05D003059 5.2e-11 71.2 92 62.0
BcaC04g18855 Brassica carinata HOM05D002657 ORTHO05D003059 6.8e-11 70.9 93 45.2
Actinidia08759 Actinidia chinensis HOM05D002657 ORTHO05D003059 1.5e-10 69.7 54 68.5
Sp6g27420 Schrenkiella parvula HOM05D002657 ORTHO05D003059 1.5e-10 69.7 93 45.2
DCAR_020422 Daucus carota HOM05D002657 ORTHO05D003059 2.0e-10 69.3 95 58.9
Hma1.2p1_0649F.1_g195230 Hydrangea macrophylla HOM05D002657 ORTHO05D003059 2.0e-10 69.3 54 66.7
Dinv17247 Davidia involucrata HOM05D002657 ORTHO05D003059 2.6e-10 68.9 54 66.7
Migut.F00936 Erythranthe guttata HOM05D002657 ORTHO05D003059 2.6e-10 68.9 60 60.0
Thhalv10012674m.g Eutrema salsugineum HOM05D002657 ORTHO05D003059 3.4e-10 68.6 93 44.1
Gorai.007G348400 Gossypium raimondii HOM05D002657 ORTHO05D003059 3.4e-10 68.6 95 44.2
Oeu038085.1 Olea europaea HOM05D002657 ORTHO05D003059 4.4e-10 68.2 60 61.7
Potri.013G079000 Populus trichocarpa HOM05D002657 ORTHO05D003059 5.8e-10 67.8 95 41.1
CSS0006811 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 7.6e-10 67.4 54 66.7
CSS0037437 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 7.6e-10 67.4 54 66.7
CSS0045858 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 7.6e-10 67.4 54 66.7
CARHR196450 Cardamine hirsuta HOM05D002657 ORTHO05D003059 7.6e-10 67.4 93 43.0
CSS0013936 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 9.9e-10 67.0 60 60.0
Lj3A885T45 Lonicera japonica HOM05D002657 ORTHO05D003059 9.9e-10 67.0 93 59.1
CiPaw.06G035300 Carya illinoinensis HOM05D002657 ORTHO05D003059 1.7e-09 66.2 95 43.2
SalBow2G3352 Salvia bowleyana HOM05D002657 ORTHO05D003059 1.7e-09 66.2 54 61.1
Cfa016065 Carpinus fangiana HOM05D002657 ORTHO05D003059 2.2e-09 65.9 95 41.1
TAR375G0807 Trochodendron aralioides HOM05D002657 ORTHO05D003059 2.2e-09 65.9 92 41.3
vmacro06532 Vaccinium macrocarpon HOM05D002657 ORTHO05D003059 2.9e-09 65.5 54 64.8
Actinidia34325 Actinidia chinensis HOM05D002657 ORTHO05D003059 3.8e-09 65.1 54 64.8
Atru.chr12.1915 Acer truncatum HOM05D002657 ORTHO05D003059 6.4e-09 64.3 54 64.8
BcaB03g12538 Brassica carinata HOM05D002657 ORTHO05D003059 6.4e-09 64.3 97 42.3
Haze_00384 Corylus avellana HOM05D002657 ORTHO05D003059 6.4e-09 64.3 93 43.0
MELO3C021858.2 Cucumis melo HOM05D002657 ORTHO05D003059 8.4e-09 63.9 54 64.8
CsaV3_2G036640 Cucumis sativus L. HOM05D002657 ORTHO05D003059 8.4e-09 63.9 54 64.8
Lalb_Chr16g0376551 Lupinus albus HOM05D002657 ORTHO05D003059 8.4e-09 63.9 54 61.1
Oeu027888.1 Olea europaea HOM05D002657 ORTHO05D003059 8.4e-09 63.9 93 43.0
Rhsim03G0223300 Rhododendron simsii HOM05D002657 ORTHO05D003059 8.4e-09 63.9 54 61.1
Lalb_Chr05g0211221 Lupinus albus HOM05D002657 ORTHO05D003059 1.1e-08 63.5 54 63.0
Peaxi162Scf00815g00358 Petunia axillaris HOM05D002657 ORTHO05D003059 1.1e-08 63.5 62 53.2
QL09p021240 Quercus lobata HOM05D002657 ORTHO05D003059 1.1e-08 63.5 54 61.1
THA.LOC104805713 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 1.1e-08 63.5 96 52.1
TWI60G0601 Tripterygium wilfordii HOM05D002657 ORTHO05D003059 1.1e-08 63.5 93 41.9
Peaxi162Scf00516g00642 Petunia axillaris HOM05D002657 ORTHO05D003059 1.4e-08 63.2 92 57.6
A03p07920 Brassica napus HOM05D002657 ORTHO05D003059 1.9e-08 62.8 98 41.8
Manes.09G128400 Manihot esculenta HOM05D002657 ORTHO05D003059 1.9e-08 62.8 59 55.9
BolC3t13410H Brassica oleracea HOM05D002657 ORTHO05D003059 2.4e-08 62.4 91 41.8
BraA03t10117Z Brassica rapa HOM05D002657 ORTHO05D003059 2.4e-08 62.4 91 41.8
Gohir.A11G303100 Gossypium hirsutum HOM05D002657 ORTHO05D003059 2.4e-08 62.4 54 63.0
Nitab4.5_0004530g0080 Nicotiana tabacum HOM05D002657 ORTHO05D003059 4.1e-08 61.6 48 66.7
Sabra19G0059600 Salix brachista HOM05D002657 ORTHO05D003059 4.1e-08 61.6 53 62.3
Solyc03g097190.3 Solanum lycopersicum HOM05D002657 ORTHO05D003059 4.1e-08 61.6 83 61.4
PGSC0003DMG400003163 Solanum tuberosum HOM05D002657 ORTHO05D003059 4.1e-08 61.6 84 61.9
Migut.F00080 Erythranthe guttata HOM05D002657 ORTHO05D003059 5.4e-08 61.2 91 39.6
Prupe.2G328200 Prunus persica HOM05D002657 ORTHO05D003059 5.4e-08 61.2 53 58.5
BcaB05g25318 Brassica carinata HOM05D002657 ORTHO05D003059 7.1e-08 60.8 93 41.9
CiPaw.05G214700 Carya illinoinensis HOM05D002657 ORTHO05D003059 7.1e-08 60.8 53 58.5
Thhalv10020078m.g Eutrema salsugineum HOM05D002657 ORTHO05D003059 7.1e-08 60.8 99 38.4
AL3G12390 Arabidopsis lyrata HOM05D002657 ORTHO05D003059 9.2e-08 60.5 101 36.6
AT3G02930 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 1.2e-07 60.1 99 37.4
Sed0014338 Sechium edule HOM05D002657 ORTHO05D003059 1.2e-07 60.1 91 39.6
Manes.08G064501 Manihot esculenta HOM05D002657 ORTHO05D003059 1.6e-07 59.7 75 48.0
THA.LOC104820899 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 1.6e-07 59.7 54 57.4
CARHR076960 Cardamine hirsuta HOM05D002657 ORTHO05D003059 2.1e-07 59.3 99 38.4
Ah.15g092810 Amaranthus hybridus HOM05D002574 ORTHO05D002797 2.7e-07 58.9 97 38.1
AL6G27740 Arabidopsis lyrata HOM05D002657 ORTHO05D003059 2.7e-07 58.9 60 53.3
EL10Ac8g20570 Beta vulgaris HOM05D002657 ORTHO05D003059 2.7e-07 58.9 93 38.7
Carub.0007s1326 Capsella rubella HOM05D002657 ORTHO05D003059 2.7e-07 58.9 94 38.3
AT5G16730 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 3.5e-07 58.5 54 57.4
Gohir.D11G318400 Gossypium hirsutum HOM05D002657 ORTHO05D003059 4.6e-07 58.2 54 59.3
Sp3g01990 Schrenkiella parvula HOM05D002657 ORTHO05D003059 4.6e-07 58.2 99 37.4
unitig_90.g27540 Utricularia gibba HOM05D002657 ORTHO05D003059 6.0e-07 57.8 60 51.7
BcaB01g05252 Brassica carinata HOM05D002657 ORTHO05D003059 7.8e-07 57.4 96 38.5
C02p21090 Brassica napus HOM05D002657 ORTHO05D003059 7.8e-07 57.4 90 44.4
Carub.0003s0206 Capsella rubella HOM05D002657 ORTHO05D003059 7.8e-07 57.4 99 35.4
Lalb_Chr09g0320111 Lupinus albus HOM05D002657 ORTHO05D003059 7.8e-07 57.4 93 41.9
PGSC0003DMG400027037 Solanum tuberosum HOM05D002657 ORTHO05D003059 7.8e-07 57.4 83 41.0
Aa31LG11G12900 Aethionema arabicum HOM05D002657 ORTHO05D003059 1.0e-06 57.0 54 55.6
Carub.0006s1495 Capsella rubella HOM05D002657 ORTHO05D003059 1.0e-06 57.0 59 52.5
Potri.019G047600 Populus trichocarpa HOM05D002657 ORTHO05D003059 1.3e-06 56.6 49 63.3
AT4G27595 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 1.7e-06 56.2 94 35.1
BolC2t08249H Brassica oleracea HOM05D002657 ORTHO05D003059 2.3e-06 55.8 82 45.1
Sopen03g027950 Solanum pennellii HOM05D002657 ORTHO05D003059 2.3e-06 55.8 44 61.4
AL2G19630 Arabidopsis lyrata HOM05D002657 ORTHO05D003059 3.0e-06 55.5 52 57.7
Carub.0002s1018 Capsella rubella HOM05D002657 ORTHO05D003059 3.0e-06 55.5 52 57.7
Sp5g19380 Schrenkiella parvula HOM05D002657 ORTHO05D003059 3.0e-06 55.5 53 56.6
Sed0022201 Sechium edule HOM05D002657 ORTHO05D003059 3.0e-06 55.5 93 38.7
SalBow4G0313 Salvia bowleyana HOM05D002657 ORTHO05D003059 5.1e-06 54.7 85 38.8
SalBow4G0550 Salvia bowleyana HOM05D002657 ORTHO05D003059 5.1e-06 54.7 85 38.8
Ah.08g218170 Amaranthus hybridus HOM05D002657 ORTHO05D003059 8.6e-06 53.9 93 35.5
RcHm_v2.0_Chr6g0286801 Rosa chinensis HOM05D002657 ORTHO05D003059 8.6e-06 53.9 53 56.6


User provided reference genes

Program Settings