Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029759 Daucus carota HOM05D002657 ORTHO05D003059 3.1e-105 385.2 199 100.0
DCAR_031221 Daucus carota HOM05D011703 ORTHO05D014202 1.4e-28 130.6 140 55.0
DCAR_001578 Daucus carota HOM05D011703 ORTHO05D014202 8.3e-26 121.3 59 94.9
DCAR_029760 Daucus carota HOM05D002657 ORTHO05D003059 3.3e-22 109.4 96 71.9
DCAR_029761 Daucus carota HOM05D002657 ORTHO05D003059 4.0e-20 102.4 96 68.8
DCAR_029764 Daucus carota HOM05D002657 ORTHO05D003059 6.8e-20 101.7 81 77.8
DCAR_029763 Daucus carota HOM05D002657 ORTHO05D003059 8.3e-18 94.7 92 68.5
Dinv29136 Davidia involucrata HOM05D002657 ORTHO05D003059 7.0e-17 91.7 82 67.1
Cc01_g00970 Coffea canephora HOM05D002657 ORTHO05D003059 1.7e-15 87.0 108 53.7
DCAR_031265 Daucus carota HOM05D011703 ORTHO05D014202 9.8e-11 71.2 72 45.8
MSTRG.7 Avicennia marina HOM05D002657 ORTHO05D003059 2.2e-10 70.1 82 52.4
Solyc06g072730.4 Solanum lycopersicum HOM05D002657 ORTHO05D003059 2.2e-10 70.1 88 47.7
DCAR_009021 Daucus carota HOM05D002657 ORTHO05D003059 2.9e-10 69.7 125 40.8
Migut.F00936 Erythranthe guttata HOM05D002657 ORTHO05D003059 3.7e-10 69.3 67 56.7
DCAR_031427 Daucus carota HOM05D011703 ORTHO05D014202 6.4e-10 68.6 70 47.1
Oeu007519.1 Olea europaea HOM05D002657 ORTHO05D003059 6.4e-10 68.6 87 48.3
Haze_00384 Corylus avellana HOM05D002657 ORTHO05D003059 1.4e-09 67.4 76 53.9
Oeu038085.1 Olea europaea HOM05D002657 ORTHO05D003059 2.4e-09 66.6 67 56.7
TAR375G0807 Trochodendron aralioides HOM05D002657 ORTHO05D003059 2.4e-09 66.6 82 48.8
DCAR_020422 Daucus carota HOM05D002657 ORTHO05D003059 5.4e-09 65.5 58 65.5
Actinidia08759 Actinidia chinensis HOM05D002657 ORTHO05D003059 7.0e-09 65.1 54 66.7
Gohir.A11G303100 Gossypium hirsutum HOM05D002657 ORTHO05D003059 7.0e-09 65.1 71 56.3
Gorai.007G348400 Gossypium raimondii HOM05D002657 ORTHO05D003059 7.0e-09 65.1 96 43.8
BcaC04g18855 Brassica carinata HOM05D002657 ORTHO05D003059 9.2e-09 64.7 81 49.4
Hma1.2p1_0649F.1_g195230 Hydrangea macrophylla HOM05D002657 ORTHO05D003059 9.2e-09 64.7 54 63.0
Manes.08G064501 Manihot esculenta HOM05D002657 ORTHO05D003059 9.2e-09 64.7 76 52.6
CSS0037437 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 1.2e-08 64.3 58 62.1
CSS0045858 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 1.2e-08 64.3 58 62.1
Dinv17247 Davidia involucrata HOM05D002657 ORTHO05D003059 1.2e-08 64.3 54 64.8
CSS0013936 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 1.6e-08 63.9 58 60.3
Sopen06g029110 Solanum pennellii HOM05D002657 ORTHO05D003059 1.6e-08 63.9 88 45.5
TWI60G0601 Tripterygium wilfordii HOM05D002657 ORTHO05D003059 2.0e-08 63.5 76 51.3
CSS0006811 Camellia sinensis var. sinensis HOM05D002657 ORTHO05D003059 2.7e-08 63.2 58 60.3
Actinidia34325 Actinidia chinensis HOM05D002657 ORTHO05D003059 3.5e-08 62.8 58 62.1
Nitab4.5_0000021g0730 Nicotiana tabacum HOM05D002657 ORTHO05D003059 3.5e-08 62.8 53 60.4
Sp6g27420 Schrenkiella parvula HOM05D002657 ORTHO05D003059 3.5e-08 62.8 81 48.1
CARHR196450 Cardamine hirsuta HOM05D002657 ORTHO05D003059 7.8e-08 61.6 98 40.8
Thhalv10012674m.g Eutrema salsugineum HOM05D002657 ORTHO05D003059 7.8e-08 61.6 91 44.0
Lj3A885T45 Lonicera japonica HOM05D002657 ORTHO05D003059 7.8e-08 61.6 54 63.0
Lalb_Chr05g0211221 Lupinus albus HOM05D002657 ORTHO05D003059 7.8e-08 61.6 58 58.6
Potri.013G079000 Populus trichocarpa HOM05D002657 ORTHO05D003059 7.8e-08 61.6 93 44.1
Atru.chr12.1915 Acer truncatum HOM05D002657 ORTHO05D003059 1.0e-07 61.2 54 64.8
Lalb_Chr16g0376551 Lupinus albus HOM05D002657 ORTHO05D003059 1.0e-07 61.2 58 56.9
Lalb_Chr09g0320111 Lupinus albus HOM05D002657 ORTHO05D003059 1.3e-07 60.8 120 35.8
Rhsim03G0223300 Rhododendron simsii HOM05D002657 ORTHO05D003059 1.3e-07 60.8 58 56.9
SalBow2G3352 Salvia bowleyana HOM05D002657 ORTHO05D003059 1.3e-07 60.8 54 57.4
AL3G12390 Arabidopsis lyrata HOM05D002657 ORTHO05D003059 1.7e-07 60.5 86 43.0
Gohir.D11G318400 Gossypium hirsutum HOM05D002657 ORTHO05D003059 1.7e-07 60.5 63 55.6
BcaB03g12538 Brassica carinata HOM05D002657 ORTHO05D003059 2.3e-07 60.1 96 44.8
Thhalv10020078m.g Eutrema salsugineum HOM05D002657 ORTHO05D003059 2.3e-07 60.1 86 44.2
Oeu027888.1 Olea europaea HOM05D002657 ORTHO05D003059 2.3e-07 60.1 82 48.8
vmacro06532 Vaccinium macrocarpon HOM05D002657 ORTHO05D003059 2.3e-07 60.1 54 61.1
AT3G02930 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 3.0e-07 59.7 86 43.0
BcaB05g25318 Brassica carinata HOM05D002657 ORTHO05D003059 3.0e-07 59.7 72 48.6
A03p07920 Brassica napus HOM05D002657 ORTHO05D003059 3.0e-07 59.7 81 45.7
BolC3t13410H Brassica oleracea HOM05D002657 ORTHO05D003059 3.0e-07 59.7 81 45.7
BraA03t10117Z Brassica rapa HOM05D002657 ORTHO05D003059 3.0e-07 59.7 81 45.7
CARHR076960 Cardamine hirsuta HOM05D002657 ORTHO05D003059 3.9e-07 59.3 86 44.2
QL09p021240 Quercus lobata HOM05D002657 ORTHO05D003059 5.0e-07 58.9 57 56.1
MELO3C021858.2 Cucumis melo HOM05D002657 ORTHO05D003059 6.6e-07 58.5 54 61.1
CsaV3_2G036640 Cucumis sativus L. HOM05D002657 ORTHO05D003059 6.6e-07 58.5 54 61.1
Peaxi162Scf00815g00358 Petunia axillaris HOM05D002657 ORTHO05D003059 6.6e-07 58.5 56 53.6
SalBow4G0313 Salvia bowleyana HOM05D002657 ORTHO05D003059 6.6e-07 58.5 81 44.4
SalBow4G0550 Salvia bowleyana HOM05D002657 ORTHO05D003059 6.6e-07 58.5 81 44.4
CAN.G631.31 Capsicum annuum HOM05D002657 ORTHO05D003059 8.6e-07 58.2 75 50.7
THA.LOC104820899 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 8.6e-07 58.2 57 54.4
Carub.0003s0206 Capsella rubella HOM05D002657 ORTHO05D003059 1.1e-06 57.8 86 40.7
CiPaw.06G035300 Carya illinoinensis HOM05D002657 ORTHO05D003059 1.5e-06 57.4 81 46.9
Manes.09G128400 Manihot esculenta HOM05D002657 ORTHO05D003059 1.5e-06 57.4 53 58.5
Prupe.2G328200 Prunus persica HOM05D002657 ORTHO05D003059 1.5e-06 57.4 53 56.6
C02p21090 Brassica napus HOM05D002657 ORTHO05D003059 1.9e-06 57.0 83 45.8
Peaxi162Scf00516g00642 Petunia axillaris HOM05D002657 ORTHO05D003059 1.9e-06 57.0 53 54.7
Sp3g01990 Schrenkiella parvula HOM05D002657 ORTHO05D003059 1.9e-06 57.0 86 43.0
Ah.15g092810 Amaranthus hybridus HOM05D002574 ORTHO05D002797 2.5e-06 56.6 82 46.3
AT4G27595 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 2.5e-06 56.6 78 42.3
Cfa016065 Carpinus fangiana HOM05D002657 ORTHO05D003059 2.5e-06 56.6 81 45.7
CiPaw.05G214700 Carya illinoinensis HOM05D002657 ORTHO05D003059 2.5e-06 56.6 53 56.6
EL10Ac8g20570 Beta vulgaris HOM05D002657 ORTHO05D003059 3.3e-06 56.2 82 45.1
Nitab4.5_0004530g0080 Nicotiana tabacum HOM05D002657 ORTHO05D003059 3.3e-06 56.2 48 60.4
ATR0665G660 Amborella trichopoda HOM05D002657 ORTHO05D003059 4.3e-06 55.8 74 47.3
BcaB01g05252 Brassica carinata HOM05D002657 ORTHO05D003059 4.3e-06 55.8 86 41.9
BolC2t08249H Brassica oleracea HOM05D002657 ORTHO05D003059 5.6e-06 55.5 79 44.3
CAN.G333.7 Capsicum annuum HOM05D002657 ORTHO05D003059 5.6e-06 55.5 84 42.9
unitig_90.g27540 Utricularia gibba HOM05D002657 ORTHO05D003059 5.6e-06 55.5 59 52.5
Migut.F00080 Erythranthe guttata HOM05D002657 ORTHO05D003059 7.3e-06 55.1 83 41.0
Sed0022201 Sechium edule HOM05D002657 ORTHO05D003059 7.3e-06 55.1 81 44.4
AT5G16730 Arabidopsis thaliana HOM05D002657 ORTHO05D003059 9.5e-06 54.7 57 52.6
CARHR056460 Cardamine hirsuta HOM05D002657 ORTHO05D003059 9.5e-06 54.7 58 55.2
RcHm_v2.0_Chr6g0286801 Rosa chinensis HOM05D002657 ORTHO05D003059 9.5e-06 54.7 63 52.4


User provided reference genes

Program Settings