Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.9e-143 511.9 263 100.0
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 9.5e-70 267.7 315 49.8
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.6e-69 265.8 310 49.4
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 8.0e-69 264.6 310 48.7
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 4.0e-68 262.3 311 48.2
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 5.2e-68 261.9 311 49.5
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 5.2e-68 261.9 312 49.4
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 6.8e-68 261.5 312 49.7
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 6.8e-68 261.5 311 47.9
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 8.9e-68 261.2 312 48.7
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 8.9e-68 261.2 311 47.6
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 7.5e-67 258.1 315 47.0
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 7.5e-67 258.1 313 46.6
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 3.7e-66 255.8 312 46.2
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 3.7e-66 255.8 310 48.7
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.1e-65 254.2 313 46.3
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.4e-65 253.8 313 46.6
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.4e-65 253.1 308 47.1
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 9.2e-65 251.1 321 46.1
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 9.2e-65 251.1 317 45.4
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.2e-64 250.8 310 45.8
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.6e-64 250.4 310 46.5
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 7.8e-64 248.1 317 45.1
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.0e-63 247.7 320 46.2
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.3e-63 246.5 317 44.8
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 6.6e-63 245.0 312 46.2
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 8.6e-63 244.6 309 46.6
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.5e-62 243.8 307 47.6
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.5e-62 243.8 307 47.6
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 1.5e-62 243.8 299 47.8
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.5e-62 243.8 310 45.8
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 1.5e-62 243.8 291 49.5
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 1.9e-62 243.4 287 49.8
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 3.3e-62 242.7 319 45.5
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 7.3e-62 241.5 326 44.8
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 7.3e-62 241.5 308 45.5
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 9.5e-62 241.1 310 46.1
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 3.6e-61 239.2 293 47.1
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 3.6e-61 239.2 327 43.7
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 3.6e-61 239.2 316 45.3
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 8.0e-61 238.0 324 43.5
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 8.0e-61 238.0 313 45.4
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 8.0e-61 238.0 309 46.3
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.0e-60 237.7 314 45.5
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.4e-60 237.3 315 45.1
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 1.8e-60 236.9 307 45.6
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.0e-60 236.1 310 45.2
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 4.0e-60 235.7 315 45.4
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 8.9e-60 234.6 306 45.1
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 8.9e-60 234.6 310 45.2
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.2e-59 234.2 315 43.8
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 1.2e-59 234.2 312 42.3
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 2.0e-59 233.4 315 44.4
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 3.4e-59 232.6 312 45.8
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 4.4e-59 232.3 315 45.1
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 1.7e-58 230.3 320 44.7
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 1.7e-58 230.3 310 44.5
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 2.9e-58 229.6 313 45.7
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 3.7e-58 229.2 295 46.4
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.4e-58 228.4 313 45.0
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 6.4e-58 228.4 316 43.7
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 1.1e-57 227.6 323 42.7
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 1.1e-57 227.6 310 45.2
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 2.4e-57 226.5 314 43.9
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 4.1e-57 225.7 311 42.4
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 5.4e-57 225.3 313 45.4
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 1.2e-56 224.2 317 40.7
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.6e-56 223.8 299 44.8
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 1.6e-56 223.8 312 41.3
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 2.7e-56 223.0 310 42.6
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.5e-56 222.6 318 43.7
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 6.0e-56 221.9 313 43.1
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 1.0e-55 221.1 291 45.0
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.3e-55 219.9 258 49.6
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 3.0e-55 219.5 318 40.6
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.0e-55 219.5 272 50.4
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 5.0e-55 218.8 318 40.3
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 6.6e-55 218.4 329 39.5
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 8.6e-55 218.0 331 42.6
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 1.1e-54 217.6 316 39.9
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 1.1e-54 217.6 316 39.9
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 1.9e-54 216.9 313 39.9
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.3e-54 216.1 331 42.3
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 4.3e-54 215.7 291 44.0
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 9.5e-54 214.5 314 42.0
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 9.5e-54 214.5 252 49.6
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.6e-53 212.6 296 43.2
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.4e-52 210.7 295 44.4
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 9.8e-51 204.5 309 41.4
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 3.5e-48 196.1 302 39.4
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 7.8e-48 194.9 300 42.7
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.0e-47 192.2 298 41.6
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.2e-45 187.6 291 41.2
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 1.8e-44 183.7 254 44.1
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 2.3e-44 183.3 264 41.3
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 4.4e-43 179.1 242 43.8
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 7.5e-43 178.3 290 39.3
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 3.9e-39 166.0 307 38.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.1e-37 160.2 254 41.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 8.1e-37 158.3 241 41.1
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 8.4e-34 148.3 140 57.9
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 3.3e-30 136.3 102 65.7
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 5.6e-30 135.6 186 46.2
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 4.7e-29 132.5 100 66.0
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.2e-27 127.9 318 31.8
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 5.8e-27 125.6 97 60.8
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 9.9e-27 124.8 134 49.3
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.3e-26 124.4 228 36.8
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.4e-25 120.9 102 59.8
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 6.0e-24 115.5 188 38.8
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 4.9e-18 95.9 261 31.8
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 6.2e-13 79.0 121 39.7
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 2.9e-10 70.1 85 47.1
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.6e-08 64.3 54 59.3


User provided reference genes

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