Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029560 Daucus carota HOM05D012822 ORTHO05D178574 2.9e-177 625.2 324 100.0
DCAR_029558 Daucus carota HOM05D012822 ORTHO05D176177 9.6e-173 610.1 326 98.2
DCAR_031624 Daucus carota HOM05D012822 ORTHO05D176708 2.4e-155 552.4 326 88.7
DCAR_029559 Daucus carota HOM05D012822 ORTHO05D176008 9.3e-152 540.4 289 98.3
DCAR_006355 Daucus carota HOM05D012822 ORTHO05D177086 3.6e-18 96.7 155 37.4
DCAR_006361 Daucus carota HOM05D012822 ORTHO05D176214 1.3e-15 88.2 156 36.5
DCAR_006359 Daucus carota HOM05D012822 ORTHO05D174945 3.7e-15 86.7 167 32.9
DCAR_006369 Daucus carota HOM05D012822 ORTHO05D178502 2.4e-14 84.0 129 36.4
DCAR_006365 Daucus carota HOM05D012822 ORTHO05D175367 9.1e-14 82.0 129 36.4
DCAR_020000 Daucus carota HOM05D012822 ORTHO05D177058 8.5e-12 75.5 158 34.2
Hma1.2p1_3091F.1_g332540 Hydrangea macrophylla HOM05D000244 ORTHO05D000179 1.9e-11 74.3 150 35.3
Ciclev10016163m.g Citrus clementina HOM05D000244 ORTHO05D000179 3.6e-10 70.1 142 32.4
Actinidia16382 Actinidia chinensis HOM05D000244 ORTHO05D000179 6.7e-09 65.9 109 41.3
Actinidia24452 Actinidia chinensis HOM05D000244 ORTHO05D000179 6.7e-09 65.9 109 41.3
Duzib093G0476 Durio zibethinus HOM05D000244 ORTHO05D004919 2.0e-08 64.3 198 30.3
MBI13_g42344_MAGBIO Magnolia biondii HOM05D000244 ORTHO05D000179 2.6e-08 63.9 182 28.0
Duzib170G0796 Durio zibethinus HOM05D000244 ORTHO05D000179 4.4e-08 63.2 103 35.0
DCAR_019866 Daucus carota HOM05D012822 ORTHO05D176266 5.7e-08 62.8 158 30.4
Dinv05106 Davidia involucrata HOM05D000244 ORTHO05D000179 5.7e-08 62.8 153 28.1
Actinidia06963 Actinidia chinensis HOM05D000244 ORTHO05D000179 7.4e-08 62.4 109 37.6
Gorai.009G230300 Gossypium raimondii HOM05D000244 ORTHO05D004919 1.3e-07 61.6 214 27.1
Gohir.A05G220300 Gossypium hirsutum HOM05D000244 ORTHO05D004919 1.7e-07 61.2 214 27.1
Duzib168G2152 Durio zibethinus HOM05D000244 ORTHO05D000179 2.2e-07 60.8 101 35.6
Gohir.D07G123900 Gossypium hirsutum HOM05D000244 ORTHO05D000179 2.2e-07 60.8 103 34.0
Gorai.001G133900 Gossypium raimondii HOM05D000244 ORTHO05D000179 2.2e-07 60.8 103 34.0
ATR0022G007 Amborella trichopoda HOM05D000244 ORTHO05D004919 2.8e-07 60.5 149 27.5
arahy.Tifrunner.gnm1.ann1.JDDW1W Arachis hypogaea HOM05D000244 ORTHO05D000179 3.7e-07 60.1 156 28.2
MBI06_g36040_MAGBIO Magnolia biondii HOM05D000244 ORTHO05D004919 3.7e-07 60.1 176 29.0
Gohir.D05G223100 Gossypium hirsutum HOM05D000244 ORTHO05D004919 4.8e-07 59.7 214 26.6
MD15G1384100 Malus domestica HOM05D000244 ORTHO05D004919 4.8e-07 59.7 193 32.6
FvH4_5g35490 Fragaria vesca HOM05D000244 ORTHO05D004919 6.3e-07 59.3 171 31.6
Gohir.A07G119700 Gossypium hirsutum HOM05D000244 ORTHO05D000179 6.3e-07 59.3 166 28.3
RcHm_v2.0_Chr5g0050611 Rosa chinensis HOM05D000244 ORTHO05D000179 6.3e-07 59.3 157 29.9
Dinv44851 Davidia involucrata HOM05D000244 ORTHO05D004919 8.2e-07 58.9 191 29.3
FvH4_3g27860 Fragaria vesca HOM05D000244 ORTHO05D000179 8.2e-07 58.9 153 29.4
FAN04G1436 Fragaria x ananassa HOM05D000244 ORTHO05D004919 8.2e-07 58.9 171 31.6
FAN11G3244 Fragaria x ananassa HOM05D000244 ORTHO05D000179 8.2e-07 58.9 166 28.9
FAN18G1982 Fragaria x ananassa HOM05D000244 ORTHO05D004919 8.2e-07 58.9 171 31.6
AT1G14490 Arabidopsis thaliana HOM05D000244 ORTHO05D004919 1.1e-06 58.5 164 33.5
Ca_05426_v3 Cicer arietinum L. HOM05D000244 ORTHO05D004919 1.1e-06 58.5 194 26.3
FAN13G0285 Fragaria x ananassa HOM05D000244 ORTHO05D004919 1.1e-06 58.5 171 32.2
FAN21G1282 Fragaria x ananassa HOM05D000244 ORTHO05D000179 1.1e-06 58.5 132 30.3
Lalb_Chr11g0065051 Lupinus albus HOM05D000244 ORTHO05D004919 1.1e-06 58.5 177 33.3
Manes.01G178900 Manihot esculenta HOM05D000244 ORTHO05D000179 1.1e-06 58.5 158 26.6
arahy.Tifrunner.gnm1.ann1.PF419L Arachis hypogaea HOM05D000244 ORTHO05D000179 1.4e-06 58.2 173 27.2
arahy.Tifrunner.gnm1.ann1.XN3VW8 Arachis hypogaea HOM05D000244 ORTHO05D000179 1.4e-06 58.2 173 27.2
TPR.G16028 Trifolium pratense HOM05D000244 ORTHO05D004919 1.4e-06 58.2 159 27.7
CDE02G3997 Ceratophyllum demersum HOM05D000244 ORTHO05D000179 1.8e-06 57.8 159 28.3
VMungo0540G0704 Vigna mungo HOM05D000244 ORTHO05D000179 1.8e-06 57.8 151 27.8
ECA232G4764 Erigeron canadensis HOM05D000244 ORTHO05D004919 2.4e-06 57.4 192 30.2
Gohir.A02G078700 Gossypium hirsutum HOM05D000244 ORTHO05D004919 2.4e-06 57.4 166 28.9
Gohir.A05G071100 Gossypium hirsutum HOM05D000244 ORTHO05D000179 2.4e-06 57.4 162 27.8
MD01G1138500 Malus domestica HOM05D000244 ORTHO05D000179 2.4e-06 57.4 166 28.9
Prupe.1G530300 Prunus persica HOM05D000244 ORTHO05D004919 2.4e-06 57.4 190 31.6
RcHm_v2.0_Chr7g0236871 Rosa chinensis HOM05D000244 ORTHO05D004919 2.4e-06 57.4 176 31.8
THA.LOC104824569 Tarenaya hassleriana HOM05D000244 ORTHO05D004919 2.4e-06 57.4 220 28.2
MELO3C015690.2 Cucumis melo HOM05D000244 ORTHO05D000179 3.1e-06 57.0 184 27.7
FAN16G0530 Fragaria x ananassa HOM05D000244 ORTHO05D000179 3.1e-06 57.0 166 28.9
Lj4P736T15 Lonicera japonica HOM05D000244 ORTHO05D004919 3.1e-06 57.0 177 29.9
Nn2g13460 Nelumbo nucifera HOM05D000244 ORTHO05D000179 3.1e-06 57.0 183 30.1
Phvul.008G181100 Phaseolus vulgaris HOM05D000244 ORTHO05D004919 3.1e-06 57.0 142 31.7
Ciclev10001847m.g Citrus clementina HOM05D000244 ORTHO05D004919 4.1e-06 56.6 158 29.7
FvH4_7g08070 Fragaria vesca HOM05D000244 ORTHO05D000179 4.1e-06 56.6 161 29.8
FAN03G0631 Fragaria x ananassa HOM05D000244 ORTHO05D000179 4.1e-06 56.6 161 29.8
FAN06G1626 Fragaria x ananassa HOM05D000244 ORTHO05D000179 4.1e-06 56.6 161 29.8
FAN10G3118 Fragaria x ananassa HOM05D000244 ORTHO05D000179 4.1e-06 56.6 161 29.8
Nn1g05541 Nelumbo nucifera HOM05D000244 ORTHO05D004919 4.1e-06 56.6 165 27.9
TAR628G0674 Trochodendron aralioides HOM05D000244 ORTHO05D004919 4.1e-06 56.6 158 29.7
BcaB01g02948 Brassica carinata HOM05D000244 ORTHO05D004919 5.3e-06 56.2 156 32.7
DCAR_029108 Daucus carota HOM05D012822 ORTHO05D177385 5.3e-06 56.2 123 28.5
FAN08G2285 Fragaria x ananassa HOM05D000244 ORTHO05D004919 5.3e-06 56.2 171 31.0
Gorai.005G096700 Gossypium raimondii HOM05D000244 ORTHO05D004919 5.3e-06 56.2 181 28.7
Phvul.006G013800 Phaseolus vulgaris HOM05D000244 ORTHO05D000179 5.3e-06 56.2 147 28.6
A03p27490 Brassica napus HOM05D000244 ORTHO05D004919 7.0e-06 55.8 156 32.7
BraA03t11962Z Brassica rapa HOM05D000244 ORTHO05D004919 7.0e-06 55.8 156 32.7
Medtr5g066020 Medicago truncatula HOM05D000244 ORTHO05D004919 7.0e-06 55.8 183 27.9
VMungo0540G2165 Vigna mungo HOM05D000244 ORTHO05D000179 7.0e-06 55.8 188 28.2
AL1G26390 Arabidopsis lyrata HOM05D000244 ORTHO05D004919 9.1e-06 55.5 169 32.0
COL.COLO4_35218 Corchorus olitorius HOM05D000244 ORTHO05D004919 9.1e-06 55.5 195 30.3
Duzib116G0561 Durio zibethinus HOM05D000244 ORTHO05D004919 9.1e-06 55.5 197 29.9
Duzib205G1244 Durio zibethinus HOM05D000244 ORTHO05D000179 9.1e-06 55.5 168 29.2
SHI22682 Sapria himalayana HOM05D000244 ORTHO05D000179 9.1e-06 55.5 183 27.3
TWI12G1174 Tripterygium wilfordii HOM05D000244 ORTHO05D004919 9.1e-06 55.5 191 27.7


User provided reference genes

Program Settings