Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029522 Daucus carota HOM05D003186 ORTHO05D003452 1.3e-151 539.7 264 100.0
Hma1.2p1_0021F.1_g014275 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 2.7e-40 169.9 307 41.4
Hma1.2p1_0021F.1_g014290 Hydrangea macrophylla HOM05D003186 ORTHO05D003452 2.7e-40 169.9 307 41.4
Dinv44017 Davidia involucrata HOM05D003186 ORTHO05D003452 3.3e-38 162.9 313 39.9
Dinv43584 Davidia involucrata HOM05D003186 ORTHO05D003452 1.6e-37 160.6 310 39.0
TAR375G0380 Trochodendron aralioides HOM05D003186 ORTHO05D003452 8.1e-37 158.3 303 39.6
Lj9P549T18 Lonicera japonica HOM05D003186 ORTHO05D003452 5.8e-35 152.1 313 37.1
Nitab4.5_0006873g0020 Nicotiana tabacum HOM05D003186 ORTHO05D003452 4.6e-32 142.5 321 36.4
Nitab4.5_0004088g0100 Nicotiana tabacum HOM05D003186 ORTHO05D003452 1.0e-31 141.4 319 36.1
Cc02_g25690 Coffea canephora HOM05D003186 ORTHO05D003452 3.0e-31 139.8 327 35.8
TAR374G0545 Trochodendron aralioides HOM05D003186 ORTHO05D003452 1.5e-30 137.5 293 37.2
Solyc01g088530.2 Solanum lycopersicum HOM05D003186 ORTHO05D003452 1.9e-30 137.1 309 35.3
PGSC0003DMG400001684 Solanum tuberosum HOM05D003186 ORTHO05D003452 2.5e-30 136.7 315 36.2
Thecc.01G403000 Theobroma cacao HOM05D003186 ORTHO05D003452 2.5e-30 136.7 320 35.3
COL.COLO4_12347 Corchorus olitorius HOM05D003186 ORTHO05D003452 5.6e-30 135.6 319 34.5
Psat3g101600 Pisum sativum HOM05D003186 ORTHO05D003452 7.4e-30 135.2 313 35.8
FAN01G1315 Fragaria x ananassa HOM05D003186 ORTHO05D003452 2.1e-29 133.7 326 34.0
Lsat_1_v5_gn_4_38621 Lactuca sativa HOM05D003186 ORTHO05D003452 2.1e-29 133.7 330 33.3
Duzib268G0279 Durio zibethinus HOM05D003186 ORTHO05D003452 2.8e-29 133.3 320 35.0
FvH4_7g08720 Fragaria vesca HOM05D003186 ORTHO05D003452 2.8e-29 133.3 332 33.7
Sopen01g035390 Solanum pennellii HOM05D003186 ORTHO05D003452 2.8e-29 133.3 315 35.2
Gorai.004G067500 Gossypium raimondii HOM05D003186 ORTHO05D003452 6.2e-29 132.1 321 35.2
CAN.G756.11 Capsicum annuum HOM05D003186 ORTHO05D003452 8.1e-29 131.7 316 36.1
FAN10G1238 Fragaria x ananassa HOM05D003186 ORTHO05D003452 8.1e-29 131.7 328 32.9
Gohir.A12G099500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 8.1e-29 131.7 310 35.5
Actinidia05791 Actinidia chinensis HOM05D003186 ORTHO05D003452 1.1e-28 131.3 279 35.5
ECA236G2684 Erigeron canadensis HOM05D003186 ORTHO05D003452 1.1e-28 131.3 317 32.8
FAN10G4096 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.1e-28 131.3 328 33.2
CANSAT25G0028 Cannabis sativa HOM05D003186 ORTHO05D003452 1.4e-28 131.0 353 33.4
DCAR_025021 Daucus carota HOM05D003186 ORTHO05D003452 1.4e-28 131.0 309 38.5
Gohir.D12G102500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.4e-28 131.0 312 36.2
Sed0022506 Sechium edule HOM05D003186 ORTHO05D003452 1.4e-28 131.0 327 33.3
Gorai.008G111700 Gossypium raimondii HOM05D003186 ORTHO05D003452 5.3e-28 129.0 313 35.8
FAN06G1121 Fragaria x ananassa HOM05D003186 ORTHO05D003452 6.9e-28 128.6 320 34.1
MSTRG.17102 Avicennia marina HOM05D003186 ORTHO05D003452 1.2e-27 127.9 306 34.3
Gohir.D08G065200 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.2e-27 127.9 321 34.9
Lj1g0019973 Lotus japonicus HOM05D003186 ORTHO05D003452 2.6e-27 126.7 317 34.4
PGR042G2698 Punica granatum HOM05D003186 ORTHO05D003452 2.6e-27 126.7 312 33.7
MSTRG.28131 Avicennia marina HOM05D003186 ORTHO05D003452 4.5e-27 125.9 307 34.5
Phvul.008G051200 Phaseolus vulgaris HOM05D003186 ORTHO05D003452 4.5e-27 125.9 318 33.6
Peaxi162Scf00745g00012 Petunia axillaris HOM05D003186 ORTHO05D003452 5.8e-27 125.6 331 36.0
Actinidia33295 Actinidia chinensis HOM05D003186 ORTHO05D003452 7.6e-27 125.2 305 35.7
Oeu037407.1 Olea europaea HOM05D003186 ORTHO05D003452 9.9e-27 124.8 301 34.9
FAN03G3421 Fragaria x ananassa HOM05D003186 ORTHO05D003452 1.3e-26 124.4 331 32.6
Gohir.A08G055900 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.3e-26 124.4 321 34.6
Gohir.A08G141000 Gossypium hirsutum HOM05D003186 ORTHO05D003452 3.8e-26 122.9 317 33.4
Ciclev10021280m.g Citrus clementina HOM05D003186 ORTHO05D003452 8.4e-26 121.7 311 31.8
Duzib133G0015 Durio zibethinus HOM05D003186 ORTHO05D003452 8.4e-26 121.7 318 34.6
SalBow4G0872 Salvia bowleyana HOM05D003186 ORTHO05D003452 1.4e-25 120.9 303 34.7
Oeu034770.1 Olea europaea HOM05D003186 ORTHO05D003452 1.9e-25 120.6 320 34.1
Haze_02907 Corylus avellana HOM05D003186 ORTHO05D003452 2.4e-25 120.2 315 33.0
Sabra02G0105200 Salix brachista HOM05D003186 ORTHO05D003452 4.2e-25 119.4 337 32.0
VMungo1383G2278 Vigna mungo HOM05D003186 ORTHO05D003452 4.2e-25 119.4 316 33.2
CARHR139820 Cardamine hirsuta HOM05D003186 ORTHO05D003452 5.5e-25 119.0 314 31.8
MD07G1088100 Malus domestica HOM05D003186 ORTHO05D003452 9.3e-25 118.2 314 34.4
Cfa011019 Carpinus fangiana HOM05D003186 ORTHO05D003452 1.6e-24 117.5 315 31.7
Ca_08022_v3 Cicer arietinum L. HOM05D003186 ORTHO05D003452 2.1e-24 117.1 311 34.1
Gorai.004G168400 Gossypium raimondii HOM05D003186 ORTHO05D003452 2.1e-24 117.1 313 32.6
Manes.05G059100 Manihot esculenta HOM05D003186 ORTHO05D003452 3.5e-24 116.3 323 33.7
Potri.002G135400 Populus trichocarpa HOM05D003186 ORTHO05D003452 3.5e-24 116.3 337 32.3
Sed0018587 Sechium edule HOM05D003186 ORTHO05D003452 3.5e-24 116.3 312 32.7
TPR.G27403 Trifolium pratense HOM05D003186 ORTHO05D003452 4.6e-24 115.9 313 32.9
CsaV3_6G006600 Cucumis sativus L. HOM05D003186 ORTHO05D003452 6.0e-24 115.5 339 33.0
Gohir.D08G162100 Gossypium hirsutum HOM05D003186 ORTHO05D003452 6.0e-24 115.5 306 33.7
TWI59G0953 Tripterygium wilfordii HOM05D003186 ORTHO05D003452 6.0e-24 115.5 326 33.7
BcaB02g08836 Brassica carinata HOM05D003186 ORTHO05D003452 7.9e-24 115.2 302 31.8
Migut.N01712 Erythranthe guttata HOM05D003186 ORTHO05D003452 7.9e-24 115.2 313 31.0
Thhalv10006502m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 7.9e-24 115.2 308 33.8
Duzib138G0449 Durio zibethinus HOM05D003186 ORTHO05D003452 1.3e-23 114.4 320 33.1
SGA_v2.0_scaffold77G25250 Striga asiatica HOM05D003186 ORTHO05D003452 1.8e-23 114.0 306 32.7
Glyma.09G247300 Glycine max HOM05D003186 ORTHO05D003452 3.0e-23 113.2 314 33.1
Oeu024385.1 Olea europaea HOM05D003186 ORTHO05D003452 3.0e-23 113.2 323 33.7
Potri.014G043800 Populus trichocarpa HOM05D003186 ORTHO05D003452 3.0e-23 113.2 332 30.7
Atru.chr5.38 Acer truncatum HOM05D003186 ORTHO05D003452 3.9e-23 112.8 328 33.2
CiPaw.14G016300 Carya illinoinensis HOM05D003186 ORTHO05D003452 3.9e-23 112.8 324 33.0
Glyma.18G245700 Glycine max HOM05D003186 ORTHO05D003452 5.1e-23 112.5 304 32.6
CiPaw.13G021700 Carya illinoinensis HOM05D003186 ORTHO05D003452 6.7e-23 112.1 319 31.7
Aqoxy3G02543 Aquilegia oxysepala HOM05D000001 ORTHO05D004986 8.7e-23 111.7 300 33.3
AT2G44600 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 1.1e-22 111.3 318 30.5
MELO3C022461.2 Cucumis melo HOM05D003186 ORTHO05D003452 1.1e-22 111.3 341 31.1
Prupe.2G114900 Prunus persica HOM05D003186 ORTHO05D003452 1.5e-22 110.9 320 33.8
Nn1g00622 Nelumbo nucifera HOM05D003186 ORTHO05D003452 1.9e-22 110.5 328 34.1
Sabra14G0031700 Salix brachista HOM05D003186 ORTHO05D003452 1.9e-22 110.5 339 31.6
Thhalv10001551m.g Eutrema salsugineum HOM05D003186 ORTHO05D003452 2.5e-22 110.2 325 32.0
Atru.chr5.68 Acer truncatum HOM05D003186 ORTHO05D003452 3.3e-22 109.8 333 32.4
MBI04_g03333_MAGBIO Magnolia biondii HOM05D003186 ORTHO05D003452 4.3e-22 109.4 275 33.8
Aa31LG10G14340 Aethionema arabicum HOM05D003186 ORTHO05D003452 7.4e-22 108.6 309 33.0
Aa31LG1G26150 Aethionema arabicum HOM05D003186 ORTHO05D003452 1.3e-21 107.8 335 30.7
HanXRQChr11g0344041 Helianthus annuus HOM05D003186 ORTHO05D003452 1.3e-21 107.8 307 32.6
Lsat_1_v5_gn_7_11660 Lactuca sativa HOM05D003186 ORTHO05D003452 1.3e-21 107.8 332 31.9
ClCG06G000800 Citrullus lanatus HOM05D003186 ORTHO05D003452 1.6e-21 107.5 346 30.6
SalBow5G4877 Salvia bowleyana HOM05D003186 ORTHO05D003452 1.6e-21 107.5 307 32.6
arahy.Tifrunner.gnm1.ann1.U9U8W4 Arachis hypogaea HOM05D003186 ORTHO05D003452 2.1e-21 107.1 318 32.1
Hund17130 Selenicereus undatus HOM05D003186 ORTHO05D003452 3.7e-21 106.3 282 31.2
Carub.0004s2715 Capsella rubella HOM05D003186 ORTHO05D003452 4.8e-21 105.9 321 32.1
A09p52480 Brassica napus HOM05D003186 ORTHO05D003452 6.2e-21 105.5 289 34.9
AL5G42410 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 1.4e-20 104.4 307 35.5
A05p04750 Brassica napus HOM05D003186 ORTHO05D003452 1.4e-20 104.4 303 32.7
Gorai.007G084000 Gossypium raimondii HOM05D003186 ORTHO05D003452 1.8e-20 104.0 301 30.6
Rhsim01G0144500 Rhododendron simsii HOM05D003186 ORTHO05D003452 1.8e-20 104.0 304 33.6
MELO3C006262.2 Cucumis melo HOM05D003186 ORTHO05D003452 3.1e-20 103.2 321 31.8
Gohir.D11G078500 Gossypium hirsutum HOM05D003186 ORTHO05D003452 4.0e-20 102.8 301 30.2
Lalb_Chr03g0040811 Lupinus albus HOM05D003186 ORTHO05D003452 4.0e-20 102.8 291 29.9
Nitab4.5_0016340g0010 Nicotiana tabacum HOM05D003186 ORTHO05D003452 4.0e-20 102.8 307 32.9
MSTRG.20661 Avicennia marina HOM05D003186 ORTHO05D003452 5.3e-20 102.4 313 32.6
BcaC07g40522 Brassica carinata HOM05D003186 ORTHO05D003452 5.3e-20 102.4 285 34.7
C08p35230 Brassica napus HOM05D003186 ORTHO05D003452 5.3e-20 102.4 285 34.7
BolC8t51117H Brassica oleracea HOM05D003186 ORTHO05D003452 5.3e-20 102.4 285 34.7
HanXRQChr01g0017501 Helianthus annuus HOM05D003186 ORTHO05D003452 5.3e-20 102.4 311 31.5
Lalb_Chr19g0126271 Lupinus albus HOM05D003186 ORTHO05D003452 5.3e-20 102.4 292 32.2
Sp5g03010 Schrenkiella parvula HOM05D003186 ORTHO05D003452 5.3e-20 102.4 303 34.0
BraA05t19451Z Brassica rapa HOM05D003186 ORTHO05D003452 6.9e-20 102.1 298 32.2
HanXRQChr04g0113081 Helianthus annuus HOM05D003186 ORTHO05D003452 9.0e-20 101.7 325 31.4
QL04p025941 Quercus lobata HOM05D003186 ORTHO05D003452 9.0e-20 101.7 323 30.3
QL04p026933 Quercus lobata HOM05D003186 ORTHO05D003452 9.0e-20 101.7 323 30.3
BraA09t40678Z Brassica rapa HOM05D003186 ORTHO05D003452 1.2e-19 101.3 285 34.4
CsaV3_3G010380 Cucumis sativus L. HOM05D003186 ORTHO05D003452 2.0e-19 100.5 317 31.5
Ah.05g177570 Amaranthus hybridus HOM05D003186 ORTHO05D003452 2.6e-19 100.1 297 32.3
BolC4t22186H Brassica oleracea HOM05D003186 ORTHO05D003452 3.4e-19 99.8 307 30.6
ECA234G0702 Erigeron canadensis HOM05D003186 ORTHO05D003452 3.4e-19 99.8 295 29.2
Rhsim07G0039500 Rhododendron simsii HOM05D003186 ORTHO05D003452 4.5e-19 99.4 308 31.5
BcaC02g12291 Brassica carinata HOM05D003186 ORTHO05D003452 5.8e-19 99.0 308 31.5
C04p05560 Brassica napus HOM05D003186 ORTHO05D003452 5.8e-19 99.0 308 31.5
Ca_23143_v3 Cicer arietinum L. HOM05D003186 ORTHO05D003452 7.6e-19 98.6 289 31.8
Migut.B01481 Erythranthe guttata HOM05D003186 ORTHO05D003452 7.6e-19 98.6 308 32.1
HanXRQChr17g0550401 Helianthus annuus HOM05D003186 ORTHO05D003452 7.6e-19 98.6 336 30.1
Lsat_1_v5_gn_0_5020 Lactuca sativa HOM05D003186 ORTHO05D003452 2.2e-18 97.1 350 29.4
BcaC02g10119 Brassica carinata HOM05D003186 ORTHO05D003452 3.8e-18 96.3 302 31.5
BolC4t24815H Brassica oleracea HOM05D003186 ORTHO05D003452 3.8e-18 96.3 302 31.5
Sp4g26690 Schrenkiella parvula HOM05D003186 ORTHO05D003452 4.9e-18 95.9 316 30.1
BcaB06g29388 Brassica carinata HOM05D003186 ORTHO05D003452 6.5e-18 95.5 270 31.9
AT3G60200 Arabidopsis thaliana HOM05D003186 ORTHO05D003452 8.4e-18 95.1 305 32.1
Migut.O00568 Erythranthe guttata HOM05D003186 ORTHO05D003452 8.4e-18 95.1 292 31.2
C04p32500 Brassica napus HOM05D003186 ORTHO05D003452 1.1e-17 94.7 302 31.1
Gohir.A11G073800 Gossypium hirsutum HOM05D003186 ORTHO05D003452 1.1e-17 94.7 301 29.9
TPR.G6017 Trifolium pratense HOM05D003186 ORTHO05D003452 1.1e-17 94.7 271 28.8
unitig_750.g28400 Utricularia gibba HOM05D003186 ORTHO05D003452 1.1e-17 94.7 295 34.9
THA.LOC104817174 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 1.9e-17 94.0 307 31.3
BcaB06g29389 Brassica carinata HOM05D003186 ORTHO05D003452 2.5e-17 93.6 269 32.0
TWI23G1002 Tripterygium wilfordii HOM05D003186 ORTHO05D003452 3.2e-17 93.2 230 37.8
THA.LOC104803082 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 4.2e-17 92.8 344 30.5
AL4G43640 Arabidopsis lyrata HOM05D003186 ORTHO05D003452 1.2e-16 91.3 324 28.1
Lj3g0018708 Lotus japonicus HOM05D003186 ORTHO05D003452 2.1e-16 90.5 299 31.1
A07p25000 Brassica napus HOM05D003186 ORTHO05D003452 2.7e-16 90.1 269 33.8
Sed0008398 Sechium edule HOM05D003186 ORTHO05D003452 2.7e-16 90.1 319 31.0
Nitab4.5_0000204g0050 Nicotiana tabacum HOM05D003186 ORTHO05D003452 3.5e-16 89.7 299 30.8
EL10Ac1g00705 Beta vulgaris HOM05D003186 ORTHO05D003452 6.0e-16 89.0 307 28.3
BcaB02g07428 Brassica carinata HOM05D003186 ORTHO05D003452 2.3e-15 87.0 269 32.7
BcaC08g45026 Brassica carinata HOM05D003186 ORTHO05D003452 6.7e-15 85.5 267 31.8
C06p26570 Brassica napus HOM05D003186 ORTHO05D003452 6.7e-15 85.5 267 31.8
BolC6t37821H Brassica oleracea HOM05D003186 ORTHO05D003452 6.7e-15 85.5 269 32.0
ECA248G0129 Erigeron canadensis HOM05D003186 ORTHO05D003452 1.1e-14 84.7 299 30.1
BraA04t15902Z Brassica rapa HOM05D003186 ORTHO05D003452 1.5e-14 84.3 302 28.5
HanXRQChr06g0168251 Helianthus annuus HOM05D003186 ORTHO05D003452 1.5e-14 84.3 309 32.7
PGR004G1173 Punica granatum HOM05D003186 ORTHO05D003452 1.5e-14 84.3 280 30.4
CARHR170520 Cardamine hirsuta HOM05D003186 ORTHO05D003452 3.3e-14 83.2 323 29.1
Nn6g33672 Nelumbo nucifera HOM05D003186 ORTHO05D003452 3.3e-14 83.2 306 29.7
BraA07t30140Z Brassica rapa HOM05D003186 ORTHO05D003452 4.3e-14 82.8 269 32.7
PSO339G5444 Papaver somniferum HOM05D003186 ORTHO05D003452 4.3e-14 82.8 356 27.2
Phvul.010G041200 Phaseolus vulgaris HOM05D003186 ORTHO05D003452 4.3e-14 82.8 291 31.3
A04p01780 Brassica napus HOM05D003186 ORTHO05D003452 5.7e-14 82.4 307 28.3
Eucgr.D01170 Eucalyptus grandis HOM05D003186 ORTHO05D003452 7.4e-14 82.0 214 34.1
THA.LOC104827680 Tarenaya hassleriana HOM05D003186 ORTHO05D003452 7.4e-14 82.0 303 29.4
Lj7C552T25 Lonicera japonica HOM05D003186 ORTHO05D003452 2.8e-13 80.1 276 30.8
Glyma.07G120800 Glycine max HOM05D003186 ORTHO05D003452 6.3e-13 79.0 300 29.0
Psat4g219160 Pisum sativum HOM05D003186 ORTHO05D003452 8.2e-13 78.6 295 28.5
BcaB02g08186 Brassica carinata HOM05D003186 ORTHO05D003452 1.1e-12 78.2 309 29.8
BcaC07g40415 Brassica carinata HOM05D003186 ORTHO05D003452 4.1e-12 76.3 295 30.8
Actinidia30956 Actinidia chinensis HOM05D003186 ORTHO05D003452 9.0e-12 75.1 239 31.0
SGA_v2.0_scaffold95G28726 Striga asiatica HOM05D003186 ORTHO05D003452 1.5e-11 74.3 291 29.9
Glyma.03G103001 Glycine max HOM05D003186 ORTHO05D003452 4.5e-11 72.8 296 30.4
Eucgr.E01708 Eucalyptus grandis HOM05D003186 ORTHO05D003452 7.6e-11 72.0 338 29.6
PSO648G0113 Papaver somniferum HOM05D003186 ORTHO05D003452 7.6e-11 72.0 360 26.7
AUR62023357 Chenopodium quinoa HOM05D003186 ORTHO05D003452 1.0e-10 71.6 286 29.0
BcaC02g07102 Brassica carinata HOM05D003186 ORTHO05D003452 2.2e-10 70.5 281 29.2
Carub.0005s2694 Capsella rubella HOM05D003186 ORTHO05D003452 8.5e-10 68.6 107 43.9
VMungo0331G1717 Vigna mungo HOM05D003186 ORTHO05D003452 1.1e-09 68.2 296 29.4
C04p71110 Brassica napus HOM05D003186 ORTHO05D003452 1.4e-09 67.8 281 28.8
BolC4t28614H Brassica oleracea HOM05D003186 ORTHO05D003452 1.4e-09 67.8 281 28.8
Zm00001eb251070 Zea mays HOM05D003186 ORTHO05D003452 1.4e-09 67.8 299 26.4
ATR0665G229 Amborella trichopoda HOM05D003186 ORTHO05D003452 9.3e-09 65.1 308 26.9
A04p33400 Brassica napus HOM05D003186 ORTHO05D003452 1.0e-07 61.6 281 27.4
BraA04t18801Z Brassica rapa HOM05D003186 ORTHO05D003452 1.3e-07 61.2 281 27.4
arahy.Tifrunner.gnm1.ann1.RVTT15 Arachis hypogaea HOM05D003186 ORTHO05D003452 3.0e-07 60.1 295 25.8
Zm00001eb072580 Zea mays HOM05D003186 ORTHO05D003452 3.9e-07 59.7 292 25.7
DCAR_015777 Daucus carota HOM05D003186 ORTHO05D003452 6.7e-07 58.9 322 25.8
BcaC07g40516 Brassica carinata HOM05D003186 ORTHO05D003452 1.5e-06 57.8 59 57.6
AUR62013800 Chenopodium quinoa HOM05D003186 ORTHO05D003452 9.7e-06 55.1 247 29.6


User provided reference genes

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