Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029481 Daucus carota HOM05D001862 ORTHO05D034030 3.2e-68 261.5 125 100.0
DCAR_026112 Daucus carota HOM05D001862 ORTHO05D034030 5.7e-41 171.0 100 87.0
DCAR_007654 Daucus carota HOM05D001862 ORTHO05D002133 5.5e-36 154.5 113 71.7
Oeu041676.1 Olea europaea HOM05D001862 ORTHO05D002133 9.2e-15 84.0 117 50.4
Lj9A536T73 Lonicera japonica HOM05D001862 ORTHO05D002133 2.3e-13 79.3 108 43.5
Lj5A31T65 Lonicera japonica HOM05D001862 ORTHO05D002133 8.6e-13 77.4 114 45.6
HanXRQChr12g0360141 Helianthus annuus HOM05D001862 ORTHO05D002133 1.6e-11 73.2 99 45.5
MSTRG.2711 Avicennia marina HOM05D001862 ORTHO05D002133 4.7e-11 71.6 116 45.7
Dinv20395 Davidia involucrata HOM05D001862 ORTHO05D002133 4.7e-11 71.6 97 52.6
CSS0010613 Camellia sinensis var. sinensis HOM05D001862 ORTHO05D002133 8.1e-11 70.9 91 49.5
Oeu006537.1 Olea europaea HOM05D001862 ORTHO05D002133 8.1e-11 70.9 102 46.1
HanXRQChr10g0311931 Helianthus annuus HOM05D001862 ORTHO05D002133 1.4e-10 70.1 108 43.5
Actinidia21820 Actinidia chinensis HOM05D001862 ORTHO05D002133 1.8e-10 69.7 98 45.9
MBI19_g36229_MAGBIO Magnolia biondii HOM05D001862 ORTHO05D002133 3.1e-10 68.9 115 41.7
RcHm_v2.0_Chr2g0147021 Rosa chinensis HOM05D001862 ORTHO05D002133 5.2e-10 68.2 114 43.9
Eucgr.I02137 Eucalyptus grandis HOM05D001862 ORTHO05D002133 6.8e-10 67.8 102 46.1
Actinidia31154 Actinidia chinensis HOM05D001862 ORTHO05D002133 1.5e-09 66.6 95 48.4
Hma1.2p1_0229F.1_g096970 Hydrangea macrophylla HOM05D001862 ORTHO05D002133 1.5e-09 66.6 118 43.2
HanXRQChr04g0094341 Helianthus annuus HOM05D001862 ORTHO05D002133 2.0e-09 66.2 88 45.5
Actinidia26005 Actinidia chinensis HOM05D001862 ORTHO05D002133 3.4e-09 65.5 101 44.6
CANSAT80G0512 Cannabis sativa HOM05D001862 ORTHO05D002133 4.4e-09 65.1 124 41.9
vmacro21002 Vaccinium macrocarpon HOM05D001862 ORTHO05D002133 5.8e-09 64.7 99 43.4
Lsat_1_v5_gn_1_38480 Lactuca sativa HOM05D001862 ORTHO05D002133 2.9e-08 62.4 85 44.7
unitig_699.g19952 Utricularia gibba HOM05D001862 ORTHO05D002133 2.9e-08 62.4 105 44.8
CANSAT56G1183 Cannabis sativa HOM05D001862 ORTHO05D002133 4.9e-08 61.6 126 42.1
Sed0011920 Sechium edule HOM05D001862 ORTHO05D002133 6.4e-08 61.2 82 45.1
CSS0011036 Camellia sinensis var. sinensis HOM05D001862 ORTHO05D002133 8.3e-08 60.8 95 38.9
ECA234G3452 Erigeron canadensis HOM05D001862 ORTHO05D002133 8.3e-08 60.8 98 42.9
DCAR_022656 Daucus carota HOM05D001862 ORTHO05D002133 1.1e-07 60.5 76 46.1
Rhsim02G0252600 Rhododendron simsii HOM05D001862 ORTHO05D002133 1.9e-07 59.7 96 42.7
Hund18653 Selenicereus undatus HOM05D001862 ORTHO05D002133 3.2e-07 58.9 124 42.7
SGA_v2.0_scaffold2G01095 Striga asiatica HOM05D001862 ORTHO05D002133 3.2e-07 58.9 121 41.3
Nitab4.5_0005315g0020 Nicotiana tabacum HOM05D001862 ORTHO05D002133 4.1e-07 58.5 91 38.5
CAN.G861.9 Capsicum annuum HOM05D001862 ORTHO05D002133 5.4e-07 58.2 77 50.6
Nitab4.5_0000854g0130 Nicotiana tabacum HOM05D001862 ORTHO05D002133 5.4e-07 58.2 101 38.6
PGSC0003DMG400026970 Solanum tuberosum HOM05D001862 ORTHO05D002133 5.4e-07 58.2 116 42.2
Rhsim02G0252500 Rhododendron simsii HOM05D001862 ORTHO05D002133 7.1e-07 57.8 94 40.4
Sc12g0010820 Simmondsia chinensis HOM05D001862 ORTHO05D002133 7.1e-07 57.8 127 38.6
vmacro16560 Vaccinium macrocarpon HOM05D001862 ORTHO05D002133 9.2e-07 57.4 95 40.0
ClCG08G002570 Citrullus lanatus HOM05D001862 ORTHO05D002133 1.2e-06 57.0 114 42.1
Eucgr.J02605 Eucalyptus grandis HOM05D001862 ORTHO05D002133 3.5e-06 55.5 119 38.7
Solyc03g019780.4 Solanum lycopersicum HOM05D001862 ORTHO05D002133 3.5e-06 55.5 93 45.2
Sopen03g029850 Solanum pennellii HOM05D001862 ORTHO05D002133 4.6e-06 55.1 94 45.7
Lsat_1_v5_gn_1_12380 Lactuca sativa HOM05D001862 ORTHO05D002133 6.0e-06 54.7 78 43.6
CAN.G65.59 Capsicum annuum HOM05D001862 ORTHO05D002133 7.8e-06 54.3 114 38.6


User provided reference genes

Program Settings