Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029477 Daucus carota HOM05D007143 ORTHO05D008873 2.0e-77 292.4 147 100.0
DCAR_027829 Daucus carota HOM05D007143 ORTHO05D008873 7.6e-77 290.4 147 99.3
DCAR_010942 Daucus carota HOM05D007143 ORTHO05D008873 1.9e-19 99.8 48 97.9
CSS0018289 Camellia sinensis var. sinensis HOM05D007143 ORTHO05D008873 1.0e-17 94.0 48 93.8
Dinv26767 Davidia involucrata HOM05D007143 ORTHO05D008873 1.0e-17 94.0 79 64.6
Hund14109 Selenicereus undatus HOM05D007143 ORTHO05D008873 1.4e-17 93.6 48 89.6
AUR62003244 Chenopodium quinoa HOM05D007143 ORTHO05D008873 2.3e-17 92.8 48 87.5
AUR62027226 Chenopodium quinoa HOM05D007143 ORTHO05D008873 2.3e-17 92.8 48 87.5
ECA246G1897 Erigeron canadensis HOM05D007143 ORTHO05D008873 2.3e-17 92.8 48 93.8
HanXRQChr12g0378511 Helianthus annuus HOM05D007143 ORTHO05D008873 2.3e-17 92.8 48 93.8
Lsat_1_v5_gn_3_94201 Lactuca sativa HOM05D007143 ORTHO05D008873 2.3e-17 92.8 48 93.8
MSTRG.15407 Avicennia marina HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
EL10Ac6g14830 Beta vulgaris HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 85.4
CANSAT01G1554 Cannabis sativa HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
CiPaw.01G027700 Carya illinoinensis HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
Lj7A15T55 Lonicera japonica HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
Manes.13G131300 Manihot esculenta HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
Potri.007G035300 Populus trichocarpa HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
PGR102G0151 Punica granatum HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
Sabra07G0030700 Salix brachista HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
SalBow1G1982 Salvia bowleyana HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
SalBow1G4811 Salvia bowleyana HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
SGA_v2.0_scaffold62G21529 Striga asiatica HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
Thecc.01G046500 Theobroma cacao HOM05D007143 ORTHO05D008873 5.2e-17 91.7 48 91.7
Hma1.2p1_0310F.1_g120650 Hydrangea macrophylla HOM05D007143 ORTHO05D008873 6.8e-17 91.3 52 84.6
Nn6g32149 Nelumbo nucifera HOM05D007143 ORTHO05D008873 6.8e-17 91.3 48 89.6
Cfa010111 Carpinus fangiana HOM05D001304 ORTHO05D003803 8.9e-17 90.9 48 91.7
Cc07_g05460 Coffea canephora HOM05D007143 ORTHO05D008873 8.9e-17 90.9 48 91.7
Actinidia12083 Actinidia chinensis HOM05D007143 ORTHO05D008873 1.2e-16 90.5 48 89.6
Cpa.g.c29350.1 Carica papaya HOM05D007143 ORTHO05D008873 1.2e-16 90.5 48 89.6
Migut.K00836 Erythranthe guttata HOM05D007143 ORTHO05D008873 1.2e-16 90.5 48 89.6
FAN23G2260 Fragaria x ananassa HOM05D007143 ORTHO05D008873 1.2e-16 90.5 48 89.6
FAN28G0565 Fragaria x ananassa HOM05D007143 ORTHO05D008873 1.2e-16 90.5 48 89.6
RcHm_v2.0_Chr2g0103381 Rosa chinensis HOM05D007143 ORTHO05D008873 1.2e-16 90.5 48 89.6
Duzib187G1699 Durio zibethinus HOM05D007143 ORTHO05D008873 1.5e-16 90.1 48 87.5
Eucgr.H01949 Eucalyptus grandis HOM05D007143 ORTHO05D008873 1.5e-16 90.1 48 89.6
FvH4_1g14600 Fragaria vesca HOM05D007143 ORTHO05D008873 1.5e-16 90.1 48 87.5
FAN19G0819 Fragaria x ananassa HOM05D007143 ORTHO05D008873 1.5e-16 90.1 48 87.5
FAN26G1294 Fragaria x ananassa HOM05D007143 ORTHO05D008873 1.5e-16 90.1 48 87.5
QL06p044013 Quercus lobata HOM05D007143 ORTHO05D008873 1.5e-16 90.1 48 91.7
Rhsim13G0211400 Rhododendron simsii HOM05D007143 ORTHO05D008873 2.0e-16 89.7 48 87.5
Sc03g0001230 Simmondsia chinensis HOM05D007143 ORTHO05D008873 2.0e-16 89.7 48 87.5
GSVIVG01032490001 Vitis vinifera HOM05D007143 ORTHO05D008873 2.0e-16 89.7 48 89.6
Actinidia36525 Actinidia chinensis HOM05D007143 ORTHO05D008873 2.6e-16 89.4 48 87.5
Ciclev10025358m.g Citrus clementina HOM05D007143 ORTHO05D008873 3.4e-16 89.0 48 85.4
COL.COLO4_22192 Corchorus olitorius HOM05D007143 ORTHO05D008873 3.4e-16 89.0 48 87.5
vmacro16572 Vaccinium macrocarpon HOM05D007143 ORTHO05D008873 3.4e-16 89.0 48 87.5
Atru.chr3.461 Acer truncatum HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 87.5
Aqoxy6G00947 Aquilegia oxysepala HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 85.4
Ca_07521_v3 Cicer arietinum L. HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 87.5
Gohir.A02G161000 Gossypium hirsutum HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 89.6
Gohir.D03G019500 Gossypium hirsutum HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 89.6
Gorai.003G019900 Gossypium raimondii HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 89.6
MD02G1159600 Malus domestica HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 85.4
PSO541G2652 Papaver somniferum HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 87.5
PSO675G3920 Papaver somniferum HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 87.5
Psat3g145120 Pisum sativum HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 87.5
TPR.G9043 Trifolium pratense HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 87.5
TAR381G1612 Trochodendron aralioides HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 87.5
unitig_899.g15588 Utricularia gibba HOM05D007143 ORTHO05D008873 4.4e-16 88.6 48 89.6
CDE02G4637 Ceratophyllum demersum HOM05D007143 ORTHO05D008873 5.7e-16 88.2 48 87.5
Prupe.7G144300 Prunus persica HOM05D007143 ORTHO05D008873 7.5e-16 87.8 48 85.4
TWI53G0933 Tripterygium wilfordii HOM05D007143 ORTHO05D008873 7.5e-16 87.8 48 85.4
Lalb_Chr19g0125581 Lupinus albus HOM05D007143 ORTHO05D008873 9.8e-16 87.4 60 73.3
Medtr7g058500 Medicago truncatula HOM05D007143 ORTHO05D008873 9.8e-16 87.4 48 85.4
Glyma.08G354600 Glycine max HOM05D007143 ORTHO05D008873 1.7e-15 86.7 48 83.3
Lj1g0000670 Lotus japonicus HOM05D007143 ORTHO05D008873 1.7e-15 86.7 48 85.4
Ah.02g126110 Amaranthus hybridus HOM05D007143 ORTHO05D008873 2.2e-15 86.3 48 81.2
Glyma.18G171000 Glycine max HOM05D007143 ORTHO05D008873 4.9e-15 85.1 48 83.3
Peaxi162Scf00019g02120 Petunia axillaris HOM05D007143 ORTHO05D008873 4.9e-15 85.1 48 87.5
Phvul.008G125300 Phaseolus vulgaris HOM05D007143 ORTHO05D008873 4.9e-15 85.1 48 81.2
VMungo1383G0562 Vigna mungo HOM05D007143 ORTHO05D008873 4.9e-15 85.1 48 81.2
Nitab4.5_0002126g0040 Nicotiana tabacum HOM05D007143 ORTHO05D008873 6.3e-15 84.7 48 87.5
MBI16_g13377_MAGBIO Magnolia biondii HOM05D007143 ORTHO05D008873 1.1e-14 84.0 48 85.4
PGSC0003DMG400002783 Solanum tuberosum HOM05D007143 ORTHO05D008873 1.1e-14 84.0 48 85.4
ATR0810G079 Amborella trichopoda HOM05D007143 ORTHO05D008873 1.8e-14 83.2 48 85.4
ClCG02G013080 Citrullus lanatus HOM05D007143 ORTHO05D008873 1.8e-14 83.2 48 79.2
MELO3C020919.2 Cucumis melo HOM05D007143 ORTHO05D008873 1.8e-14 83.2 48 79.2
CsaV3_2G017160 Cucumis sativus L. HOM05D007143 ORTHO05D008873 1.8e-14 83.2 48 79.2
AL4G13460 Arabidopsis lyrata HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 81.2
AT2G23470 Arabidopsis thaliana HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 81.2
BcaB06g27904 Brassica carinata HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 81.2
Carub.0004s0270 Capsella rubella HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 81.2
CAN.G93.1 Capsicum annuum HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 83.3
CARHR293110 Cardamine hirsuta HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 81.2
Thhalv10000206m.g Eutrema salsugineum HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 81.2
Oeu039058.1 Olea europaea HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 83.3
Sp4g02480 Schrenkiella parvula HOM05D007143 ORTHO05D008873 3.1e-14 82.4 48 81.2
Aqoxy6G00714 Aquilegia oxysepala HOM05D007143 ORTHO05D008873 4.1e-14 82.0 48 81.2
Sed0017317 Sechium edule HOM05D007143 ORTHO05D008873 5.4e-14 81.6 48 83.3
Solyc02g065360.4 Solanum lycopersicum HOM05D007143 ORTHO05D008873 9.2e-14 80.9 48 83.3
A04p17910 Brassica napus HOM05D007143 ORTHO05D008873 1.2e-13 80.5 48 79.2
C04p52820 Brassica napus HOM05D007143 ORTHO05D008873 1.2e-13 80.5 48 79.2
BolC4t26847H Brassica oleracea HOM05D007143 ORTHO05D008873 1.2e-13 80.5 48 79.2
BraA04t17411Z Brassica rapa HOM05D007143 ORTHO05D008873 1.2e-13 80.5 48 79.2
Nitab4.5_0000090g0050 Nicotiana tabacum HOM05D007143 ORTHO05D008873 1.2e-13 80.5 48 83.3
Sopen02g015570 Solanum pennellii HOM05D007143 ORTHO05D008873 2.7e-13 79.3 48 81.2
MBI13_g23650_MAGBIO Magnolia biondii HOM05D007143 ORTHO05D008873 4.5e-13 78.6 48 79.2
SEGI_23767 Sequoiadendron giganteum HOM05D007143 ORTHO05D008873 7.3e-11 71.2 48 72.9
SEGI_38157 Sequoiadendron giganteum HOM05D007143 ORTHO05D008873 7.3e-11 71.2 48 72.9
AagrBONN_evm.TU.Sc2ySwM_117.2332 Anthoceros agrestis HOM05D007143 ORTHO05D008873 2.3e-09 66.2 48 64.6
Mapoly0003s0225 Marchantia polymorpha HOM05D007143 ORTHO05D008873 2.3e-09 66.2 48 64.6
Pp3c13_23590 Physcomitrium patens HOM05D007143 ORTHO05D008873 6.4e-07 58.2 48 52.1
CBR_g42158 Chara braunii HOM05D002321 ORTHO05D008873 3.2e-06 55.8 48 52.1
PRCOL_00005696 Prasinoderma coloniale HOM05D002321 ORTHO05D008873 5.4e-06 55.1 58 50.0


User provided reference genes

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