Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 7.0e-284 979.9 490 100.0
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 2.5e-140 503.1 501 54.1
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 1.4e-138 497.3 516 52.1
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 2.7e-134 483.0 475 54.7
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 2.4e-127 459.9 474 52.3
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 1.0e-125 454.5 489 50.3
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 1.3e-125 454.1 474 51.5
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.7e-125 453.8 477 52.6
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 2.5e-124 449.9 487 51.3
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 5.6e-124 448.7 477 51.8
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 1.6e-123 447.2 477 51.6
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 1.4e-122 444.1 475 50.7
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 7.5e-121 438.3 495 50.7
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 2.9e-120 436.4 488 50.4
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 2.7e-118 429.9 487 50.5
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 1.0e-117 427.9 448 51.8
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 3.0e-117 426.4 476 49.4
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 3.3e-116 422.9 475 49.5
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 9.5e-116 421.4 474 49.8
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 2.3e-114 416.8 474 47.0
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 6.8e-114 415.2 480 47.7
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 2.0e-113 413.7 485 48.5
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 2.6e-113 413.3 485 48.7
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 2.2e-112 410.2 482 47.3
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 4.9e-112 409.1 475 48.2
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 8.4e-112 408.3 489 48.5
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 1.5e-108 397.5 486 48.4
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 5.6e-108 395.6 489 46.4
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 7.3e-108 395.2 462 50.2
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 1.8e-106 390.6 455 47.5
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 6.8e-106 388.7 469 45.0
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 4.4e-105 386.0 470 47.7
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 4.4e-105 386.0 470 47.7
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 9.9e-105 384.8 491 46.4
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.4e-103 380.2 480 45.0
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 5.4e-103 379.0 487 45.0
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 5.4e-103 379.0 469 47.8
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 2.3e-101 373.6 458 45.6
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 6.6e-101 372.1 462 46.5
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 1.5e-100 370.9 446 48.7
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 1.9e-100 370.5 443 45.8
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 2.5e-100 370.2 456 46.7
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 2.5e-100 370.2 470 42.3
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 9.6e-100 368.2 443 49.0
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 1.6e-99 367.5 500 45.2
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 1.1e-98 364.8 440 47.5
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 1.8e-98 364.0 463 46.2
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 6.4e-96 355.5 462 45.9
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 7.9e-94 348.6 489 43.1
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 7.9e-94 348.6 497 43.9
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 3.9e-93 346.3 522 40.8
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 8.7e-93 345.1 436 46.1
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 2.2e-88 330.5 474 43.5
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 4.3e-84 316.2 406 44.8
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 3.2e-79 300.1 455 42.2
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 1.0e-77 295.0 393 44.8
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 5.1e-77 292.7 461 38.2
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 6.9e-74 282.3 484 36.2
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 1.5e-73 281.2 460 39.1
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 1.3e-67 261.5 448 36.4
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 7.7e-65 252.3 456 35.1
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.2e-64 250.8 456 36.4
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 3.8e-64 250.0 475 35.2
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 3.8e-64 250.0 458 35.8
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 2.1e-62 244.2 458 35.6
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 4.6e-62 243.0 329 44.7
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 3.9e-61 240.0 456 36.6
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 4.3e-60 236.5 440 33.2
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 4.3e-60 236.5 440 33.2
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 9.7e-60 235.3 480 34.2
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 9.7e-60 235.3 352 43.8
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 1.7e-59 234.6 454 32.8
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 1.7e-59 234.6 440 33.4
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 2.2e-59 234.2 440 33.6
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 2.8e-59 233.8 440 33.2
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 1.4e-58 231.5 446 32.7
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 1.8e-58 231.1 455 31.6
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 3.1e-58 230.3 461 33.6
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.6e-57 227.3 390 36.9
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 3.4e-57 226.9 435 32.6
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 4.5e-57 226.5 478 30.8
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 1.0e-56 225.3 461 34.1
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 3.8e-56 223.4 461 33.0
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 7.9e-54 215.7 236 47.9
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 7.9e-54 215.7 431 34.8
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 1.4e-53 214.9 449 33.0
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 1.8e-53 214.5 491 31.4
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 2.0e-52 211.1 442 34.2
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 4.4e-52 209.9 388 36.9
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 1.3e-51 208.4 448 32.4
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 2.8e-51 207.2 370 35.9
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 3.7e-51 206.8 393 34.4
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 1.1e-50 205.3 448 32.6
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 1.8e-50 204.5 464 31.7
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 3.1e-50 203.8 370 35.9
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 2.9e-48 197.2 465 30.8
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 3.8e-48 196.8 362 35.4
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.2e-46 191.8 407 33.4
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 1.6e-46 191.4 137 65.7
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.6e-46 191.4 368 34.8
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 3.6e-46 190.3 439 34.4
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.3e-43 181.8 358 32.4
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 6.3e-43 179.5 335 35.2
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 2.4e-42 177.6 383 31.6
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 4.5e-41 173.3 445 29.4
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 8.5e-40 169.1 380 30.8
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 8.5e-40 169.1 454 29.7
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 2.5e-39 167.5 385 31.4
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 9.4e-39 165.6 154 50.6
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 8.8e-37 159.1 436 28.9
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 7.5e-36 156.0 387 29.7
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 1.7e-35 154.8 116 61.2
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 1.7e-35 154.8 144 56.9
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 3.7e-35 153.7 387 29.5
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 4.8e-35 153.3 144 56.2
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 8.3e-35 152.5 384 30.2
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 1.0e-32 145.6 162 42.6
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 1.3e-32 145.2 306 35.6
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.7e-32 144.8 396 30.1
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 5.0e-32 143.3 145 53.1
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 1.1e-31 142.1 148 52.0
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 1.1e-31 142.1 148 52.0
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.1e-31 142.1 374 29.4
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.9e-31 141.4 397 31.7
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 1.9e-31 141.4 145 51.0
MBI17_g35871_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 2.5e-31 141.0 110 56.4
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 5.5e-31 139.8 374 29.1
FvH4_1g27954 Fragaria vesca HOM05D005167 ORTHO05D006312 2.7e-30 137.5 165 41.8
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 4.7e-30 136.7 138 52.9
AUR62032503 Chenopodium quinoa HOM05D005167 ORTHO05D000001 6.1e-30 136.3 234 39.7
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 8.0e-30 136.0 300 29.7
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.1e-26 125.6 384 29.4
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 4.1e-26 123.6 162 38.9
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 1.5e-23 115.2 369 30.6
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 9.5e-23 112.5 302 26.5
HanXRQChr12g0378911 Helianthus annuus HOM05D005167 ORTHO05D006312 2.6e-20 104.4 139 38.1
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 3.0e-16 90.9 104 37.5
Dinv42629 Davidia involucrata HOM05D005167 ORTHO05D006312 1.1e-15 89.0 87 47.1
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 2.5e-15 87.8 104 43.3
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.3e-15 87.0 122 45.1
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 5.6e-15 86.7 109 43.1
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 2.3e-13 81.3 118 40.7
Aqoxy4G01501 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 5.2e-13 80.1 161 31.1
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 8.3e-11 72.8 67 52.2
Rhsim04G0168400 Rhododendron simsii HOM05D000018 ORTHO05D008577 7.3e-07 59.7 79 44.3


User provided reference genes

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