Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029408 Daucus carota HOM05D013938 ORTHO05D000181 2.7e-64 248.4 120 100.0
DCAR_030128 Daucus carota HOM05D013938 ORTHO05D000181 8.8e-23 110.5 133 48.9
DCAR_029410 Daucus carota HOM05D013938 ORTHO05D177219 2.8e-21 105.5 119 50.4
DCAR_022170 Daucus carota HOM05D013938 ORTHO05D000181 2.2e-18 95.9 126 43.7
DCAR_030103 Daucus carota HOM05D013938 ORTHO05D176200 2.2e-18 95.9 129 45.0
DCAR_030899 Daucus carota HOM05D013938 ORTHO05D000181 3.8e-18 95.1 120 40.8
DCAR_030900 Daucus carota HOM05D013938 ORTHO05D000181 3.8e-18 95.1 128 39.8
DCAR_005388 Daucus carota HOM05D013938 ORTHO05D178075 7.2e-17 90.9 117 40.2
DCAR_027517 Daucus carota HOM05D003922 ORTHO05D004492 1.4e-15 86.7 86 48.8
DCAR_000856 Daucus carota HOM05D013938 ORTHO05D175170 1.5e-14 83.2 128 41.4
DCAR_009006 Daucus carota HOM05D000275 ORTHO05D000181 2.0e-11 72.8 111 34.2
DCAR_030107 Daucus carota HOM05D013938 ORTHO05D176207 1.0e-10 70.5 94 44.7
DCAR_009008 Daucus carota HOM05D000275 ORTHO05D000181 2.3e-10 69.3 111 32.4
DCAR_009007 Daucus carota HOM05D000275 ORTHO05D000181 2.9e-10 68.9 120 34.2
PSO063G5480 Papaver somniferum HOM05D000275 ORTHO05D000181 1.9e-09 66.2 117 32.5
Aqoxy1G03131 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 5.5e-09 64.7 79 40.5
DCAR_030121 Daucus carota HOM05D013938 ORTHO05D176445 9.5e-09 63.9 83 43.4
Lalb_Chr07g0188481 Lupinus albus HOM05D000275 ORTHO05D003378 2.8e-08 62.4 77 36.4
CiPaw.04G066500 Carya illinoinensis HOM05D007974 ORTHO05D010062 4.7e-08 61.6 114 28.9
Aqoxy4G00380 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 6.1e-08 61.2 80 37.5
Lalb_Chr07g0188511 Lupinus albus HOM05D000275 ORTHO05D003378 6.1e-08 61.2 78 35.9
Aqoxy1G00459 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 8.0e-08 60.8 70 44.3
Lalb_Chr07g0188491 Lupinus albus HOM05D000275 ORTHO05D003378 8.0e-08 60.8 112 29.5
PSO063G4293 Papaver somniferum HOM05D000275 ORTHO05D000181 8.0e-08 60.8 82 39.0
DCAR_009799 Daucus carota HOM05D000275 ORTHO05D000181 1.0e-07 60.5 112 27.7
PSO832G2396 Papaver somniferum HOM05D000275 ORTHO05D000181 1.4e-07 60.1 114 30.7
Gohir.A12G260000 Gossypium hirsutum HOM05D007974 ORTHO05D010062 5.2e-07 58.2 113 26.5
MBI02_g11375_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 6.8e-07 57.8 121 33.1
CiPaw.03G103600 Carya illinoinensis HOM05D007974 ORTHO05D010062 8.9e-07 57.4 116 30.2
Aqoxy4G00377 Aquilegia oxysepala HOM05D000275 ORTHO05D000181 1.2e-06 57.0 80 35.0
Gohir.D12G260800 Gossypium hirsutum HOM05D007974 ORTHO05D010062 1.2e-06 57.0 113 26.5
Lsat_1_v5_gn_8_6981 Lactuca sativa HOM05D007974 ORTHO05D010062 1.2e-06 57.0 113 30.1
PSO478G0326 Papaver somniferum HOM05D000275 ORTHO05D000181 1.2e-06 57.0 82 37.8
HanXRQChr13g0393691 Helianthus annuus HOM05D007974 ORTHO05D010062 1.5e-06 56.6 78 37.2
Gorai.008G279400 Gossypium raimondii HOM05D007974 ORTHO05D010062 2.0e-06 56.2 111 27.0
Psat7g228120 Pisum sativum HOM05D000275 ORTHO05D000181 2.0e-06 56.2 117 30.8
Thecc.06G230500 Theobroma cacao HOM05D000275 ORTHO05D003378 2.0e-06 56.2 80 35.0
Atru.chr1.506 Acer truncatum HOM05D007974 ORTHO05D010062 2.6e-06 55.8 112 28.6
MBI12_g15161_MAGBIO Magnolia biondii HOM05D007974 ORTHO05D010062 2.6e-06 55.8 79 35.4
Medtr1g040335 Medicago truncatula HOM05D000275 ORTHO05D000181 3.4e-06 55.5 87 29.9
PSO017G0656 Papaver somniferum HOM05D000275 ORTHO05D000181 3.4e-06 55.5 122 31.1
PSO017G6128 Papaver somniferum HOM05D000275 ORTHO05D000181 3.4e-06 55.5 122 31.1
MSTRG.8445 Avicennia marina HOM05D007974 ORTHO05D010062 4.4e-06 55.1 86 31.4
COL.COLO4_14276 Corchorus olitorius HOM05D000659 ORTHO05D000505 5.7e-06 54.7 115 31.3
GSVIVG01010603001 Vitis vinifera HOM05D007974 ORTHO05D010062 5.7e-06 54.7 81 33.3
ATR0757G011 Amborella trichopoda HOM05D007974 ORTHO05D010062 7.5e-06 54.3 111 29.7
ECA233G5549 Erigeron canadensis HOM05D007974 ORTHO05D010062 7.5e-06 54.3 78 35.9
Thecc.06G230300 Theobroma cacao HOM05D000275 ORTHO05D003378 7.5e-06 54.3 119 31.9
Thecc.06G230600 Theobroma cacao HOM05D006508 ORTHO05D003378 7.5e-06 54.3 80 33.8
Manes.05G053900 Manihot esculenta HOM05D000275 ORTHO05D000181 9.8e-06 53.9 81 38.3
PSO478G3364 Papaver somniferum HOM05D000275 ORTHO05D000181 9.8e-06 53.9 122 30.3


User provided reference genes

Program Settings