Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029376 Daucus carota HOM05D002465 ORTHO05D005308 1.3e-87 326.2 156 100.0
DCAR_018565 Daucus carota HOM05D002465 ORTHO05D005308 1.9e-86 322.4 155 98.1
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.9e-86 322.4 155 98.1
DCAR_005086 Daucus carota HOM05D002465 ORTHO05D005308 8.1e-85 317.0 154 98.1
DCAR_030059 Daucus carota HOM05D002465 ORTHO05D005308 1.5e-83 312.8 156 95.5
DCAR_008895 Daucus carota HOM05D002465 ORTHO05D005308 1.2e-67 260.0 155 77.4
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.6e-64 249.6 152 75.0
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 6.6e-63 244.2 155 69.0
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 2.5e-62 242.3 155 69.0
MSTRG.8702 Avicennia marina HOM05D002465 ORTHO05D005308 7.3e-62 240.7 155 69.7
CAN.G290.13 Capsicum annuum HOM05D002465 ORTHO05D005308 1.3e-61 240.0 155 68.4
Cfa016295 Carpinus fangiana HOM05D002465 ORTHO05D005308 1.3e-61 240.0 155 68.4
Nitab4.5_0007593g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 2.1e-61 239.2 155 68.4
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 6.2e-61 237.7 154 66.9
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 8.1e-61 237.3 155 65.8
Sc13g0009230 Simmondsia chinensis HOM05D002465 ORTHO05D005308 1.1e-60 236.9 155 66.5
Haze_00055 Corylus avellana HOM05D002465 ORTHO05D005308 1.8e-60 236.1 155 67.1
Dinv35264 Davidia involucrata HOM05D002465 ORTHO05D005308 4.0e-60 235.0 155 66.5
Sopen12g022610 Solanum pennellii HOM05D002465 ORTHO05D005308 4.0e-60 235.0 155 67.7
Nn1g01670 Nelumbo nucifera HOM05D002465 ORTHO05D005308 5.3e-60 234.6 154 66.9
VMungo0464G1215 Vigna mungo HOM05D002465 ORTHO05D005308 5.3e-60 234.6 165 64.8
Cc02_g02290 Coffea canephora HOM05D002465 ORTHO05D005308 6.9e-60 234.2 155 66.5
Migut.F00281 Erythranthe guttata HOM05D002465 ORTHO05D005308 9.0e-60 233.8 155 65.8
Ah.07g206490 Amaranthus hybridus HOM05D002465 ORTHO05D005308 2.0e-59 232.6 155 63.9
PSO170G2577 Papaver somniferum HOM05D002465 ORTHO05D005308 2.6e-59 232.3 154 66.9
QL09p012529 Quercus lobata HOM05D002465 ORTHO05D005308 3.4e-59 231.9 154 66.9
TAR374G1583 Trochodendron aralioides HOM05D002465 ORTHO05D005308 3.4e-59 231.9 154 66.9
Ciclev10006841m.g Citrus clementina HOM05D002465 ORTHO05D005308 4.5e-59 231.5 152 69.1
SGA_v2.0_scaffold60G21117 Striga asiatica HOM05D002465 ORTHO05D005308 7.6e-59 230.7 154 67.5
Glyma.09G129600 Glycine max HOM05D002465 ORTHO05D005308 9.9e-59 230.3 155 66.5
Potri.017G148000 Populus trichocarpa HOM05D002465 ORTHO05D005308 1.3e-58 229.9 155 65.8
CiPaw.05G261600 Carya illinoinensis HOM05D002465 ORTHO05D005308 2.2e-58 229.2 155 65.8
Nitab4.5_0008234g0010 Nicotiana tabacum HOM05D002465 ORTHO05D005308 2.2e-58 229.2 155 68.4
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 2.2e-58 229.2 154 67.5
SalBow4G2218 Salvia bowleyana HOM05D002465 ORTHO05D005308 2.2e-58 229.2 155 64.5
Hund04793 Selenicereus undatus HOM05D002465 ORTHO05D005308 2.2e-58 229.2 155 63.9
MBI04_g26956_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D005308 2.9e-58 228.8 154 65.6
Sabra17G0123700 Salix brachista HOM05D002465 ORTHO05D005308 2.9e-58 228.8 155 65.8
Aqoxy5G04085 Aquilegia oxysepala HOM05D002465 ORTHO05D005308 4.9e-58 228.0 154 66.2
Eucgr.A02722 Eucalyptus grandis HOM05D002465 ORTHO05D005308 4.9e-58 228.0 155 66.5
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 6.4e-58 227.6 154 64.9
ECA232G4104 Erigeron canadensis HOM05D002465 ORTHO05D005308 1.4e-57 226.5 154 65.6
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 1.4e-57 226.5 154 64.9
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.9e-57 226.1 154 65.6
Lsat_1_v5_gn_9_56800 Lactuca sativa HOM05D002465 ORTHO05D005308 1.9e-57 226.1 154 66.2
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 2.4e-57 225.7 154 66.9
AUR62031432 Chenopodium quinoa HOM05D002465 ORTHO05D005308 3.2e-57 225.3 155 63.2
TPR.G9187 Trifolium pratense HOM05D002465 ORTHO05D005308 3.2e-57 225.3 155 65.2
Thhalv10012991m.g Eutrema salsugineum HOM05D002465 ORTHO05D005308 5.4e-57 224.6 151 62.9
Sabra17G0123300 Salix brachista HOM05D002465 ORTHO05D005308 5.4e-57 224.6 155 64.5
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 9.3e-57 223.8 155 62.6
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 9.3e-57 223.8 154 65.6
CsaV3_3G017530 Cucumis sativus L. HOM05D002465 ORTHO05D005308 1.2e-56 223.4 155 65.8
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 1.2e-56 223.4 154 64.9
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.2e-56 223.4 154 65.6
Manes.06G153300 Manihot esculenta HOM05D002465 ORTHO05D005308 1.2e-56 223.4 152 65.8
Medtr6g052330 Medicago truncatula HOM05D002465 ORTHO05D005308 1.2e-56 223.4 155 64.5
Atru.BG.183.p Acer truncatum HOM05D002465 ORTHO05D005308 1.6e-56 223.0 155 65.2
ATR0661G279 Amborella trichopoda HOM05D002465 ORTHO05D005308 2.1e-56 222.6 155 63.9
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.5e-56 221.9 154 65.6
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.5e-56 221.9 154 65.6
Ca_26606_v3 Cicer arietinum L. HOM05D002465 ORTHO05D005308 4.6e-56 221.5 153 66.7
Psat0s1684g0080 Pisum sativum HOM05D002465 ORTHO05D005308 4.6e-56 221.5 155 63.9
ClCG05G008450 Citrullus lanatus HOM05D002465 ORTHO05D005308 6.0e-56 221.1 155 64.5
EL10Ac3g05400 Beta vulgaris HOM05D002465 ORTHO05D005308 7.9e-56 220.7 154 62.3
GSVIVG01028829001 Vitis vinifera HOM05D002465 ORTHO05D005308 7.9e-56 220.7 155 63.2
Aa31LG3G9040 Aethionema arabicum HOM05D002465 ORTHO05D005308 1.8e-55 219.5 151 61.6
Lj2g0016146 Lotus japonicus HOM05D002465 ORTHO05D005308 1.8e-55 219.5 155 62.6
BcaB05g21981 Brassica carinata HOM05D002465 ORTHO05D005308 2.3e-55 219.2 154 61.7
Carub.0008s1296 Capsella rubella HOM05D002465 ORTHO05D005308 2.3e-55 219.2 151 62.3
arahy.Tifrunner.gnm1.ann1.77GMEU Arachis hypogaea HOM05D002465 ORTHO05D005308 5.1e-55 218.0 154 63.0
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.1e-55 218.0 154 64.9
HanXRQChr15g0494161 Helianthus annuus HOM05D002465 ORTHO05D005308 5.1e-55 218.0 154 63.0
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 6.7e-55 217.6 154 60.4
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 6.7e-55 217.6 154 60.4
Cpa.g.sc107.121 Carica papaya HOM05D002465 ORTHO05D005308 8.7e-55 217.2 155 61.9
Duzib205G0901 Durio zibethinus HOM05D002465 ORTHO05D005308 8.7e-55 217.2 155 61.3
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 8.7e-55 217.2 151 61.6
Thecc.03G185500 Theobroma cacao HOM05D002465 ORTHO05D005308 8.7e-55 217.2 155 61.3
Sed0022656 Sechium edule HOM05D002465 ORTHO05D005308 1.1e-54 216.9 155 63.2
Gohir.D12G255900 Gossypium hirsutum HOM05D002465 ORTHO05D005308 1.5e-54 216.5 155 60.6
TWI23G1289 Tripterygium wilfordii HOM05D002465 ORTHO05D005308 1.5e-54 216.5 155 63.2
arahy.Tifrunner.gnm1.ann1.TJ5MNL Arachis hypogaea HOM05D002465 ORTHO05D005308 1.9e-54 216.1 155 61.9
Gohir.A12G253600 Gossypium hirsutum HOM05D002465 ORTHO05D005308 2.5e-54 215.7 155 60.6
THA.LOC104811947 Tarenaya hassleriana HOM05D002465 ORTHO05D005308 2.5e-54 215.7 151 62.3
Gorai.008G274000 Gossypium raimondii HOM05D002465 ORTHO05D005308 7.4e-54 214.2 155 60.0
SHI09096 Sapria himalayana HOM05D002465 ORTHO05D005308 7.4e-54 214.2 154 63.0
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.3e-53 213.4 154 59.1
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.3e-53 213.4 154 59.1
PGR042G3288 Punica granatum HOM05D002465 ORTHO05D005308 1.3e-53 213.4 154 62.3
BcaC03g14499 Brassica carinata HOM05D002465 ORTHO05D005308 6.2e-53 211.1 154 58.4
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 2.4e-52 209.1 151 60.9
Oeu036031.1 Olea europaea HOM05D002465 ORTHO05D005308 3.1e-52 208.8 155 63.2
AL8G27230 Arabidopsis lyrata HOM05D002465 ORTHO05D005308 9.0e-52 207.2 151 59.6
SEGI_25618 Sequoiadendron giganteum HOM05D002465 ORTHO05D005308 9.0e-52 207.2 151 61.6
AT5G52800 Arabidopsis thaliana HOM05D002465 ORTHO05D005308 2.6e-51 205.7 151 59.6
Lalb_Chr19g0130571 Lupinus albus HOM05D002465 ORTHO05D005308 1.3e-50 203.4 155 60.0
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 2.2e-50 202.6 152 60.5
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 6.4e-50 201.1 165 55.8
Phvul.004G106200 Phaseolus vulgaris HOM05D002465 ORTHO05D005308 1.4e-49 199.9 160 56.9
unitig_52.g17726 Utricularia gibba HOM05D002465 ORTHO05D005308 2.7e-48 195.7 164 56.1
Peaxi162Scf00023g00823 Petunia axillaris HOM05D002465 ORTHO05D005308 2.3e-47 192.6 140 63.6
AagrBONN_evm.TU.Sc2ySwM_228.3313 Anthoceros agrestis HOM05D002465 ORTHO05D005308 2.5e-46 189.1 153 56.9
Mapoly0051s0060 Marchantia polymorpha HOM05D002465 ORTHO05D005308 7.4e-46 187.6 153 56.2
HPP92_015081 Vanilla planifolia HOM05D002465 ORTHO05D005308 7.4e-46 187.6 151 58.3
Pp3c1_12340 Physcomitrium patens HOM05D002465 ORTHO05D005308 1.2e-43 180.3 156 53.2
SMO103G0001 Selaginella moellendorffii HOM05D002465 ORTHO05D005308 4.2e-41 171.8 153 52.3
CBR_g36403 Chara braunii HOM05D002465 ORTHO05D005308 1.8e-39 166.4 158 48.7
Hma1.2p1_0274F.1_g110040 Hydrangea macrophylla HOM05D002465 ORTHO05D005308 3.9e-39 165.2 105 69.5
FAN05G2518 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.7e-39 164.5 106 67.0
FAN09G4610 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.7e-39 164.5 106 67.0
FAN10G2552 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.7e-39 164.5 106 67.0
FAN25G3664 Fragaria x ananassa HOM05D002465 ORTHO05D005308 6.7e-39 164.5 106 67.0
Actinidia08585 Actinidia chinensis HOM05D002465 ORTHO05D005308 1.5e-35 153.3 98 67.3
MELO3C006956.2 Cucumis melo HOM05D002465 ORTHO05D005308 4.5e-35 151.8 117 62.4
Sabra17G0121400 Salix brachista HOM05D002465 ORTHO05D005308 7.7e-27 124.4 88 61.4
MCO12G313 Micromonas commoda HOM05D002465 ORTHO05D005308 1.8e-23 113.2 135 43.7
Oeu058603.1 Olea europaea HOM05D002465 ORTHO05D005308 3.9e-23 112.1 68 70.6
PRCOL_00005773 Prasinoderma coloniale HOM05D002465 ORTHO05D005308 1.4e-17 93.6 134 38.8
FAN03G1432 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN09G0727 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN09G3189 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN14G0324 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN16G1547 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN21G0521 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN22G1212 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN25G1827 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN25G2717 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN27G0148 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN27G0541 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN27G0848 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
FAN28G0992 Fragaria x ananassa HOM05D002465 ORTHO05D005308 2.5e-17 92.8 69 60.9
CBR_g81559 Chara braunii HOM05D002465 ORTHO05D005308 1.5e-09 67.0 107 31.8
Cre12.g553253 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D145954 1.8e-07 60.1 48 52.1
FAN23G0684 Fragaria x ananassa HOM05D002465 ORTHO05D000592 3.0e-07 59.3 38 63.2
Cre17.g705150 Chlamydomonas reinhardtii HOM05D002465 ORTHO05D005308 5.7e-06 55.1 86 36.0


User provided reference genes

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