Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 2.8e-83 312.0 171 100.0
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 7.6e-52 207.6 171 68.4
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 1.8e-21 106.7 199 45.2
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 6.9e-21 104.8 178 48.3
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 2.6e-20 102.8 149 50.3
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 2.6e-20 102.8 197 42.6
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.3e-19 100.5 189 45.5
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 1.3e-19 100.5 199 41.7
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 4.9e-19 98.6 199 43.7
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.9e-18 96.7 180 43.3
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 2.5e-18 96.3 201 41.3
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 7.1e-18 94.7 194 42.8
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 3.5e-17 92.4 191 43.5
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 4.6e-17 92.0 177 41.2
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 7.9e-17 91.3 188 43.6
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 3.9e-16 89.0 206 37.4
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 3.3e-15 85.9 188 37.8
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 3.3e-15 85.9 169 43.2
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 4.3e-15 85.5 180 43.3
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 4.3e-15 85.5 171 42.7
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 9.6e-15 84.3 170 40.6
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 2.1e-14 83.2 184 41.3
Lsat_1_v5_gn_5_104661 Lactuca sativa HOM05D008094 ORTHO05D010082 2.8e-14 82.8 194 38.7
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 3.7e-14 82.4 178 41.6
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 8.2e-14 81.3 185 37.3
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 1.4e-13 80.5 176 42.0
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.4e-13 80.5 175 42.3
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 3.1e-13 79.3 174 38.5
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 1.2e-12 77.4 184 34.8
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 1.2e-12 77.4 183 36.6
Peaxi162Scf00011g01411 Petunia axillaris HOM05D008094 ORTHO05D010082 1.5e-12 77.0 207 42.0
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 2.0e-12 76.6 185 37.3
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 5.8e-12 75.1 178 39.9
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 7.6e-12 74.7 177 40.1
Atru.chr6.518 Acer truncatum HOM05D008094 ORTHO05D010082 3.8e-11 72.4 171 35.7
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 3.8e-11 72.4 184 36.4
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 8.4e-11 71.2 156 37.8
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 8.4e-11 71.2 172 36.0
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.4e-10 70.5 174 35.1
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 3.2e-10 69.3 187 37.4
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 3.2e-10 69.3 179 41.3
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 7.1e-10 68.2 139 43.2
FAN18G0201 Fragaria x ananassa HOM05D031323 ORTHO05D010082 9.3e-10 67.8 171 40.9
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 9.3e-10 67.8 180 39.4
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 1.2e-09 67.4 75 54.7
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 1.2e-09 67.4 168 38.1
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 1.6e-09 67.0 157 38.2
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 2.1e-09 66.6 179 38.5
ECA234G3545 Erigeron canadensis HOM05D008094 ORTHO05D010082 6.1e-09 65.1 215 37.2
Lsat_1_v5_gn_7_76841 Lactuca sativa HOM05D008094 ORTHO05D010082 6.1e-09 65.1 88 45.5
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 7.9e-09 64.7 135 42.2
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 3.0e-08 62.8 113 39.8
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 3.0e-08 62.8 113 39.8
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 6.7e-08 61.6 116 41.4
CiPaw.07G234200 Carya illinoinensis HOM05D008094 ORTHO05D010082 6.7e-08 61.6 175 41.1
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 7.4e-07 58.2 171 32.2
C07p53530 Brassica napus HOM05D010278 ORTHO05D012429 9.7e-07 57.8 94 40.4
BolC7t45845H Brassica oleracea HOM05D010278 ORTHO05D012429 1.3e-06 57.4 94 40.4
BcaC06g32890 Brassica carinata HOM05D010278 ORTHO05D012429 1.6e-06 57.0 94 40.4
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 1.6e-06 57.0 176 35.8
Oeu021214.1 Olea europaea HOM05D008094 ORTHO05D010082 1.6e-06 57.0 170 35.3
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 3.7e-06 55.8 131 36.6
RcHm_v2.0_Chr7g0220641 Rosa chinensis HOM05D031323 ORTHO05D010082 8.2e-06 54.7 168 38.1


User provided reference genes

Program Settings