Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029106 Daucus carota HOM05D000007 ORTHO05D000039 1.2e-199 699.5 329 100.0
DCAR_004904 Daucus carota HOM05D000007 ORTHO05D000039 7.8e-29 132.1 324 29.3
DCAR_026013 Daucus carota HOM05D000007 ORTHO05D000039 1.2e-24 118.2 224 36.6
DCAR_018707 Daucus carota HOM05D000007 ORTHO05D000039 5.8e-24 115.9 326 30.4
DCAR_029597 Daucus carota HOM05D000007 ORTHO05D000039 1.3e-20 104.8 190 34.7
DCAR_008764 Daucus carota HOM05D000007 ORTHO05D000039 1.6e-18 97.8 226 31.9
DCAR_008763 Daucus carota HOM05D000007 ORTHO05D000039 3.1e-17 93.6 183 31.1
DCAR_023202 Daucus carota HOM05D000007 ORTHO05D000039 2.0e-16 90.9 155 38.1
DCAR_010588 Daucus carota HOM05D000007 ORTHO05D000039 1.7e-15 87.8 245 31.0
Gorai.013G166900 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.2e-14 83.6 229 28.8
Rhsim09G0013700 Rhododendron simsii HOM05D000007 ORTHO05D000039 4.1e-14 83.2 283 29.0
Gohir.A13G144400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.0e-14 82.4 229 28.4
Gohir.D13G149200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.0e-14 82.4 229 28.4
FvH4_2g37110 Fragaria vesca HOM05D000007 ORTHO05D046304 9.2e-14 82.0 197 34.0
DCAR_008762 Daucus carota HOM05D000007 ORTHO05D000039 1.2e-13 81.6 160 30.6
MD09G1281100 Malus domestica HOM05D000007 ORTHO05D000039 1.6e-13 81.3 261 25.7
CSS0017530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 7.8e-13 79.0 258 26.7
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 6.6e-12 75.9 273 26.7
Peaxi162Scf00152g00825 Petunia axillaris HOM05D000007 ORTHO05D000039 6.6e-12 75.9 246 28.9
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.1e-11 75.1 321 25.9
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 1.9e-11 74.3 236 28.4
DCAR_020014 Daucus carota HOM05D000007 ORTHO05D000039 2.5e-11 73.9 172 35.5
Lj1P667T11 Lonicera japonica HOM05D000007 ORTHO05D000039 2.5e-11 73.9 256 28.1
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 3.3e-11 73.6 236 26.7
PGR042G0166 Punica granatum HOM05D000007 ORTHO05D000039 4.3e-11 73.2 251 27.9
DCAR_020015 Daucus carota HOM05D000007 ORTHO05D000039 5.6e-11 72.8 156 37.2
Hma1.2p1_0178F.1_g078390 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 5.6e-11 72.8 262 27.9
FAN19G1046 Fragaria x ananassa HOM05D000007 ORTHO05D000039 7.3e-11 72.4 254 28.7
FvH4_1g22270 Fragaria vesca HOM05D000007 ORTHO05D000039 9.5e-11 72.0 254 28.3
Lju114C2T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.2e-10 71.6 244 28.3
Nitab4.5_0003693g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.2e-10 71.6 245 29.0
QL07p009581 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-10 71.6 220 29.1
THA.LOC104818825 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.2e-10 71.6 193 26.9
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-10 70.9 256 27.7
PSO210G2189 Papaver somniferum HOM05D000007 ORTHO05D000017 2.1e-10 70.9 209 28.2
QL07p003229 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-10 70.9 240 27.9
FvH4_5g11830 Fragaria vesca HOM05D000007 ORTHO05D000039 2.8e-10 70.5 218 30.3
Lj1P669T8 Lonicera japonica HOM05D000007 ORTHO05D000039 2.8e-10 70.5 256 27.7
Oeu041630.1 Olea europaea HOM05D000007 ORTHO05D000039 2.8e-10 70.5 210 30.5
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 2.8e-10 70.5 204 30.4
QL07p003314 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-10 70.5 314 26.1
Lj6C667T7 Lonicera japonica HOM05D000007 ORTHO05D000017 3.6e-10 70.1 193 29.0
Prupe.3G013300 Prunus persica HOM05D000007 ORTHO05D000039 3.6e-10 70.1 281 27.8
RcHm_v2.0_Chr2g0116451 Rosa chinensis HOM05D000007 ORTHO05D000039 3.6e-10 70.1 240 28.3
FAN18G2360 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.2e-10 69.3 218 30.3
FAN18G4462 Fragaria x ananassa HOM05D000007 ORTHO05D000039 6.2e-10 69.3 218 30.3
SGA_v2.0_scaffold104G30141 Striga asiatica HOM05D000007 ORTHO05D000039 6.2e-10 69.3 248 27.0
MSTRG.15075 Avicennia marina HOM05D000007 ORTHO05D000039 8.1e-10 68.9 246 26.4
Thecc.07G075300 Theobroma cacao HOM05D000007 ORTHO05D000039 8.1e-10 68.9 308 24.7
Lsat_1_v5_gn_8_141900 Lactuca sativa HOM05D000007 ORTHO05D000039 1.1e-09 68.6 233 29.6
Nitab4.5_0012904g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.1e-09 68.6 253 28.5
PGR042G2235 Punica granatum HOM05D000007 ORTHO05D000039 1.1e-09 68.6 232 28.0
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 1.1e-09 68.6 230 29.6
Cfa007611 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.4e-09 68.2 290 27.2
DCAR_019956 Daucus carota HOM05D000007 ORTHO05D000017 1.4e-09 68.2 227 28.2
QL07p003496 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-09 68.2 293 28.0
MD09G1281000 Malus domestica HOM05D000007 ORTHO05D000039 1.8e-09 67.8 157 29.9
RcHm_v2.0_Chr3g0458821 Rosa chinensis HOM05D000007 ORTHO05D000039 1.8e-09 67.8 188 28.2
Cfa007565 Carpinus fangiana HOM05D000513 ORTHO05D005338 2.3e-09 67.4 272 27.9
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 2.3e-09 67.4 247 29.1
QL07p008965 Quercus lobata HOM05D000007 ORTHO05D000039 2.3e-09 67.4 247 26.7
RcHm_v2.0_Chr1g0321751 Rosa chinensis HOM05D000007 ORTHO05D000039 2.3e-09 67.4 274 24.8
Cc05_g06390 Coffea canephora HOM05D000007 ORTHO05D000039 3.1e-09 67.0 287 26.8
RcHm_v2.0_Chr1g0321721 Rosa chinensis HOM05D000007 ORTHO05D000039 3.1e-09 67.0 150 30.7
Dinv24453 Davidia involucrata HOM05D000007 ORTHO05D000039 4.0e-09 66.6 240 28.8
Manes.03G115800 Manihot esculenta HOM05D000007 ORTHO05D000039 4.0e-09 66.6 270 26.7
Cfa007545 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.2e-09 66.2 233 27.5
Lj1P653T16 Lonicera japonica HOM05D000007 ORTHO05D000039 5.2e-09 66.2 252 27.4
QL04p005232 Quercus lobata HOM05D000007 ORTHO05D000039 5.2e-09 66.2 250 27.6
CAN.G1360.7 Capsicum annuum HOM05D000007 ORTHO05D000039 6.8e-09 65.9 245 27.3
Nitab4.5_0001267g0120 Nicotiana tabacum HOM05D000007 ORTHO05D000039 6.8e-09 65.9 219 29.7
PSO541G3012 Papaver somniferum HOM05D000007 ORTHO05D000017 6.8e-09 65.9 239 25.9
Dinv12703 Davidia involucrata HOM05D000007 ORTHO05D000039 8.9e-09 65.5 241 22.4
Lj1C663T4 Lonicera japonica HOM05D000007 ORTHO05D000039 8.9e-09 65.5 262 28.2
QL02p059236 Quercus lobata HOM05D000007 ORTHO05D000039 8.9e-09 65.5 304 24.3
Nitab4.5_0000990g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.2e-08 65.1 242 25.2
RcHm_v2.0_Chr2g0116421 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-08 65.1 242 28.1
Duzib268G1516 Durio zibethinus HOM05D000007 ORTHO05D000039 1.5e-08 64.7 231 25.1
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-08 64.7 239 25.5
SGA_v2.0_scaffold16G07720 Striga asiatica HOM05D000007 ORTHO05D000039 1.5e-08 64.7 248 25.4
ECA233G5519 Erigeron canadensis HOM05D000007 ORTHO05D000039 2.0e-08 64.3 176 34.7
Nitab4.5_0000249g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.0e-08 64.3 249 25.7
Nitab4.5_0003693g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.0e-08 64.3 215 27.9
Peaxi162Scf00469g00823 Petunia axillaris HOM05D000007 ORTHO05D000039 2.0e-08 64.3 231 27.7
Prupe.4G151000 Prunus persica HOM05D000007 ORTHO05D000039 2.0e-08 64.3 250 25.6
RcHm_v2.0_Chr3g0488541 Rosa chinensis HOM05D000007 ORTHO05D025340 2.6e-08 63.9 166 25.9
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 3.4e-08 63.5 297 25.3
Dinv24586 Davidia involucrata HOM05D000007 ORTHO05D000039 3.4e-08 63.5 145 35.9
Lj3A803G21 Lonicera japonica HOM05D000007 ORTHO05D011249 3.4e-08 63.5 167 30.5
QL04p064435 Quercus lobata HOM05D000007 ORTHO05D000039 3.4e-08 63.5 253 25.7
RcHm_v2.0_Chr5g0030021 Rosa chinensis HOM05D000007 ORTHO05D000039 4.4e-08 63.2 207 25.1
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 5.8e-08 62.8 274 27.0
Nitab4.5_0000271g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.8e-08 62.8 182 30.2
PSO229G0018 Papaver somniferum HOM05D000007 ORTHO05D000017 5.8e-08 62.8 155 31.0
PSO339G5797 Papaver somniferum HOM05D000007 ORTHO05D000017 5.8e-08 62.8 225 28.4
QL03p005922 Quercus lobata HOM05D000007 ORTHO05D000039 5.8e-08 62.8 252 24.6
QL04p064442 Quercus lobata HOM05D000007 ORTHO05D000039 5.8e-08 62.8 252 24.6
QL09p021358 Quercus lobata HOM05D000007 ORTHO05D000039 5.8e-08 62.8 241 27.0
RcHm_v2.0_Chr5g0039041 Rosa chinensis HOM05D000007 ORTHO05D000039 5.8e-08 62.8 261 27.2
DCAR_030081 Daucus carota HOM05D000007 ORTHO05D000039 7.5e-08 62.4 144 31.2
PSO700G0020 Papaver somniferum HOM05D000007 ORTHO05D000017 7.5e-08 62.4 237 26.6
Prupe.6G096300 Prunus persica HOM05D000007 ORTHO05D000039 7.5e-08 62.4 260 25.0
QL11p053716 Quercus lobata HOM05D000007 ORTHO05D000039 7.5e-08 62.4 163 28.2
AUR62012552 Chenopodium quinoa HOM05D000007 ORTHO05D000017 9.9e-08 62.0 210 25.2
Hma1.2p1_2614F.1_g325400 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 9.9e-08 62.0 253 26.5
Nitab4.5_0003693g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.9e-08 62.0 214 27.6
QL09p022536 Quercus lobata HOM05D000007 ORTHO05D000039 9.9e-08 62.0 241 27.0
Ah.01g013860 Amaranthus hybridus HOM05D000007 ORTHO05D000039 1.3e-07 61.6 163 27.6
COL.COLO4_07287 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.3e-07 61.6 236 25.0
Hma1.2p1_1267F.1_g271540 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.3e-07 61.6 253 26.5
QL11p053745 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-07 61.6 147 30.6
CSS0036577 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.7e-07 61.2 243 23.9
Eucgr.I00164 Eucalyptus grandis HOM05D000007 ORTHO05D000039 1.7e-07 61.2 238 26.5
Lj4g0026657 Lotus japonicus HOM05D017537 ORTHO05D020786 1.7e-07 61.2 111 33.3
MD16G1129700 Malus domestica HOM05D000007 ORTHO05D000039 1.7e-07 61.2 211 29.4
Peaxi162Scf00469g00073 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-07 61.2 231 27.7
vmacro12417 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.7e-07 61.2 243 24.3
Cfa007563 Carpinus fangiana HOM05D000513 ORTHO05D005338 2.2e-07 60.8 160 28.1
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-07 60.8 227 28.2
PSO675G2381 Papaver somniferum HOM05D000007 ORTHO05D000017 2.2e-07 60.8 241 25.7
QL09p022584 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-07 60.8 208 28.4
QL11p000252 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-07 60.8 233 25.3
Peaxi162Scf00009g02529 Petunia axillaris HOM05D000007 ORTHO05D000017 2.9e-07 60.5 176 29.0
vmacro12404 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 2.9e-07 60.5 236 28.4
Aqoxy5G04202 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.7e-07 60.1 163 34.4
FAN27G3435 Fragaria x ananassa HOM05D000007 ORTHO05D046304 3.7e-07 60.1 187 29.9
Lj1A662G33 Lonicera japonica HOM05D000007 ORTHO05D000039 3.7e-07 60.1 229 25.8
PSO832G1089 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-07 60.1 238 26.5
QL03p005929 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-07 60.1 252 23.8
QL09p022606 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-07 60.1 154 29.9
SGA_v2.0_scaffold4G02111 Striga asiatica HOM05D000007 ORTHO05D000039 3.7e-07 60.1 258 26.0
TAR626G0319 Trochodendron aralioides HOM05D000007 ORTHO05D000017 3.7e-07 60.1 169 29.0
vmacro13637 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 3.7e-07 60.1 256 25.0
FAN19G0198 Fragaria x ananassa HOM05D000007 ORTHO05D025340 4.9e-07 59.7 111 31.5
PSO339G5766 Papaver somniferum HOM05D000007 ORTHO05D000017 4.9e-07 59.7 147 28.6
TAR624G0325 Trochodendron aralioides HOM05D000007 ORTHO05D000017 4.9e-07 59.7 170 28.8
AUR62029087 Chenopodium quinoa HOM05D000007 ORTHO05D000039 6.4e-07 59.3 213 25.4
Peaxi162Scf00009g02530 Petunia axillaris HOM05D000007 ORTHO05D000017 6.4e-07 59.3 172 28.5
QL06p022021 Quercus lobata HOM05D000007 ORTHO05D000039 6.4e-07 59.3 145 27.6
QL09p021311 Quercus lobata HOM05D000007 ORTHO05D000039 6.4e-07 59.3 233 26.2
RcHm_v2.0_Chr6g0304681 Rosa chinensis HOM05D000007 ORTHO05D025340 6.4e-07 59.3 99 38.4
Glyma.10G220200 Glycine max HOM05D000007 ORTHO05D000017 8.3e-07 58.9 219 28.3
Lj3P654T36 Lonicera japonica HOM05D000007 ORTHO05D000017 8.3e-07 58.9 206 26.7
Nitab4.5_0003693g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 8.3e-07 58.9 184 29.9
Peaxi162Scf00469g00087 Petunia axillaris HOM05D000007 ORTHO05D000039 8.3e-07 58.9 233 27.9
QL04p053284 Quercus lobata HOM05D000007 ORTHO05D000039 8.3e-07 58.9 210 25.7
QL08p019850 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-06 58.5 159 30.8
Lj2C34G11 Lonicera japonica HOM05D000007 ORTHO05D000017 1.4e-06 58.2 255 24.7
Lj3P804T22 Lonicera japonica HOM05D000007 ORTHO05D000017 1.4e-06 58.2 156 31.4
Nitab4.5_0005902g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.4e-06 58.2 247 23.9
PSO832G0399 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-06 58.2 186 29.0
CANSAT54G1614 Cannabis sativa HOM05D000007 ORTHO05D000039 1.9e-06 57.8 206 26.7
FvH4_6g34412 Fragaria vesca HOM05D000007 ORTHO05D000039 1.9e-06 57.8 167 31.1
Hma1.2p1_1093F.1_g256140 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.9e-06 57.8 109 36.7
Lju1601C0T10 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-06 57.8 254 24.4
PSO832G0042 Papaver somniferum HOM05D000007 ORTHO05D000017 1.9e-06 57.8 241 27.0
Psat7g065160 Pisum sativum HOM05D017537 ORTHO05D020786 1.9e-06 57.8 158 24.7
RcHm_v2.0_Chr5g0060691 Rosa chinensis HOM05D000007 ORTHO05D000017 1.9e-06 57.8 164 27.4
FAN14G2850 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.4e-06 57.4 165 30.9
Sed0003446 Sechium edule HOM05D000007 ORTHO05D000039 2.4e-06 57.4 161 32.9
QL04p067441 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-06 57.0 167 28.1
QL04p067556 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-06 57.0 167 27.5
QL07p009589 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-06 57.0 156 30.1
Nn8g40111 Nelumbo nucifera HOM05D000007 ORTHO05D000017 4.1e-06 56.6 170 27.6
Phvul.003G084100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 4.1e-06 56.6 232 27.6
Prupe.3G047100 Prunus persica HOM05D000007 ORTHO05D000039 4.1e-06 56.6 150 29.3
Prupe.4G221400 Prunus persica HOM05D000007 ORTHO05D000039 4.1e-06 56.6 277 28.2
RcHm_v2.0_Chr2g0143641 Rosa chinensis HOM05D000007 ORTHO05D000039 4.1e-06 56.6 144 29.9
Thecc.06G073000 Theobroma cacao HOM05D000007 ORTHO05D000017 4.1e-06 56.6 150 30.7
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 5.4e-06 56.2 167 30.5
AUR62027656 Chenopodium quinoa HOM05D003032 ORTHO05D003456 5.4e-06 56.2 152 30.3
Hma1.2p1_0127F.1_g059580 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 5.4e-06 56.2 162 28.4
Peaxi162Scf00613g00031 Petunia axillaris HOM05D000007 ORTHO05D000017 5.4e-06 56.2 213 25.8
CSS0049080 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 7.1e-06 55.8 104 37.5
Dinv05295 Davidia involucrata HOM05D000007 ORTHO05D000039 7.1e-06 55.8 149 30.2
Lj1C654T3 Lonicera japonica HOM05D000007 ORTHO05D000039 7.1e-06 55.8 254 25.2
PSO675G8203 Papaver somniferum HOM05D000007 ORTHO05D000017 7.1e-06 55.8 142 31.0
QL07p009479 Quercus lobata HOM05D000007 ORTHO05D000039 7.1e-06 55.8 163 28.2
QL09p022619 Quercus lobata HOM05D000007 ORTHO05D000039 7.1e-06 55.8 221 27.1
Rhsim06G0172600 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.1e-06 55.8 146 33.6
VMungo1215G0255 Vigna mungo HOM05D000007 ORTHO05D000017 7.1e-06 55.8 217 27.2
Cfa007607 Carpinus fangiana HOM05D000007 ORTHO05D000039 9.2e-06 55.5 156 27.6
Cc05_g06410 Coffea canephora HOM05D000007 ORTHO05D000039 9.2e-06 55.5 263 22.8
FAN26G0935 Fragaria x ananassa HOM05D000007 ORTHO05D025340 9.2e-06 55.5 111 30.6
Lj1C674T8 Lonicera japonica HOM05D000007 ORTHO05D000039 9.2e-06 55.5 159 27.7


User provided reference genes

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