Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029053 Daucus carota HOM05D000590 ORTHO05D005739 3.5e-177 624.8 302 100.0
DCAR_029056 Daucus carota HOM05D000590 ORTHO05D005739 6.6e-35 152.1 182 48.9
DCAR_029931 Daucus carota HOM05D000590 ORTHO05D005739 4.2e-29 132.9 216 40.7
Cfa008549 Carpinus fangiana HOM05D000590 ORTHO05D005739 2.8e-25 120.2 172 39.5
Nitab4.5_0001687g0070 Nicotiana tabacum HOM05D000590 ORTHO05D005739 1.1e-24 118.2 166 39.8
Peaxi162Scf00286g00342 Petunia axillaris HOM05D000590 ORTHO05D005739 3.1e-24 116.7 166 43.4
GSVIVG01013555001 Vitis vinifera HOM05D000590 ORTHO05D005739 2.6e-23 113.6 196 38.8
CSS0029067 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D005739 5.8e-23 112.5 177 33.9
Nitab4.5_0026039g0010 Nicotiana tabacum HOM05D000590 ORTHO05D005739 2.2e-22 110.5 166 38.0
SGA_v2.0_scaffold290G47293 Striga asiatica HOM05D000590 ORTHO05D005739 2.9e-22 110.2 133 44.4
Dinv44239 Davidia involucrata HOM05D000590 ORTHO05D005739 3.8e-22 109.8 137 44.5
QL10p044299 Quercus lobata HOM05D000590 ORTHO05D005739 3.8e-22 109.8 126 44.4
CiPaw.01G108600 Carya illinoinensis HOM05D000590 ORTHO05D005739 6.5e-22 109.0 158 39.9
Gohir.A10G136500 Gossypium hirsutum HOM05D000590 ORTHO05D005739 8.4e-22 108.6 133 45.9
Thecc.04G180700 Theobroma cacao HOM05D000590 ORTHO05D005739 1.1e-21 108.2 135 43.7
Gorai.011G144000 Gossypium raimondii HOM05D000590 ORTHO05D005739 1.4e-21 107.8 133 45.1
DCAR_023890 Daucus carota HOM05D000590 ORTHO05D005739 4.2e-21 106.3 115 43.5
Manes.04G059300 Manihot esculenta HOM05D000590 ORTHO05D005739 5.5e-21 105.9 126 46.0
Actinidia32949 Actinidia chinensis HOM05D000590 ORTHO05D005739 7.1e-21 105.5 112 48.2
Ciclev10018602m.g Citrus clementina HOM05D000590 ORTHO05D005739 7.1e-21 105.5 191 37.7
Oeu029902.1 Olea europaea HOM05D000590 ORTHO05D005739 7.1e-21 105.5 150 37.3
Prupe.1G177800 Prunus persica HOM05D000590 ORTHO05D005739 7.1e-21 105.5 140 44.3
Actinidia35907 Actinidia chinensis HOM05D000590 ORTHO05D005739 1.2e-20 104.8 164 37.8
HanXRQChr13g0390161 Helianthus annuus HOM05D000590 ORTHO05D005739 1.6e-20 104.4 141 39.7
Potri.002G232800 Populus trichocarpa HOM05D000590 ORTHO05D005739 6.0e-20 102.4 159 37.1
ECA233G2054 Erigeron canadensis HOM05D000590 ORTHO05D005739 1.0e-19 101.7 162 35.2
MSTRG.21982 Avicennia marina HOM05D000590 ORTHO05D005739 1.3e-19 101.3 136 41.9
Aa31LG5G5330 Aethionema arabicum HOM05D000590 ORTHO05D005739 2.3e-19 100.5 123 43.1
Migut.N00443 Erythranthe guttata HOM05D000590 ORTHO05D005739 3.0e-19 100.1 103 47.6
RcHm_v2.0_Chr4g0409981 Rosa chinensis HOM05D000590 ORTHO05D005739 3.0e-19 100.1 133 39.1
Sopen09g036190 Solanum pennellii HOM05D000590 ORTHO05D005739 3.0e-19 100.1 141 39.7
Hma1.2p1_0412F.1_g147170 Hydrangea macrophylla HOM05D000590 ORTHO05D005739 5.1e-19 99.4 105 44.8
Nitab4.5_0002078g0020 Nicotiana tabacum HOM05D000590 ORTHO05D005739 5.1e-19 99.4 88 56.8
Potri.014G146300 Populus trichocarpa HOM05D000590 ORTHO05D005739 6.7e-19 99.0 132 40.2
Zm00001eb308480 Zea mays HOM05D000590 ORTHO05D005739 8.7e-19 98.6 153 37.3
Sed0020632 Sechium edule HOM05D000590 ORTHO05D005739 1.9e-18 97.4 126 39.7
Cpa.g.sc50.132 Carica papaya HOM05D000590 ORTHO05D005739 2.5e-18 97.1 161 36.0
Lalb_Chr17g0336461 Lupinus albus HOM05D000590 ORTHO05D005739 2.5e-18 97.1 252 29.0
Eucgr.H00451 Eucalyptus grandis HOM05D000590 ORTHO05D005739 3.3e-18 96.7 93 47.3
unitig_578.g16517 Utricularia gibba HOM05D000590 ORTHO05D005739 4.3e-18 96.3 169 36.7
Thhalv10016217m.g Eutrema salsugineum HOM05D000590 ORTHO05D005739 5.7e-18 95.9 146 37.7
Lalb_Chr04g0258071 Lupinus albus HOM05D000590 ORTHO05D005739 5.7e-18 95.9 169 35.5
Dinv22651 Davidia involucrata HOM05D000590 ORTHO05D005739 1.3e-17 94.7 138 40.6
MELO3C026117.2 Cucumis melo HOM05D000590 ORTHO05D005739 1.6e-17 94.4 100 44.0
Sed0026193 Sechium edule HOM05D000590 ORTHO05D005739 1.6e-17 94.4 90 50.0
CAN.G710.42 Capsicum annuum HOM05D000590 ORTHO05D005739 2.1e-17 94.0 141 36.9
CsaV3_6G003090 Cucumis sativus L. HOM05D000590 ORTHO05D005739 2.8e-17 93.6 100 44.0
vmacro00564 Vaccinium macrocarpon HOM05D000590 ORTHO05D005739 2.8e-17 93.6 144 41.0
Cc00_g10020 Coffea canephora HOM05D000590 ORTHO05D005739 3.7e-17 93.2 135 37.8
Lsat_1_v5_gn_5_63200 Lactuca sativa HOM05D000590 ORTHO05D005739 3.7e-17 93.2 141 36.2
TWI63G0312 Tripterygium wilfordii HOM05D000590 ORTHO05D005739 3.7e-17 93.2 133 39.1
HPP92_008119 Vanilla planifolia HOM05D000590 ORTHO05D005739 3.7e-17 93.2 119 40.3
Glyma.18G282700 Glycine max HOM05D000590 ORTHO05D005739 4.8e-17 92.8 137 38.0
THA.LOC104800910 Tarenaya hassleriana HOM05D000590 ORTHO05D005739 4.8e-17 92.8 181 33.7
CARHR125280 Cardamine hirsuta HOM05D000590 ORTHO05D005739 6.3e-17 92.4 100 48.0
Sp4g14050 Schrenkiella parvula HOM05D000590 ORTHO05D005739 6.3e-17 92.4 186 32.3
Lj1g0024416 Lotus japonicus HOM05D000590 ORTHO05D005739 8.2e-17 92.0 142 35.9
Atru.chr3.1727 Acer truncatum HOM05D000590 ORTHO05D005739 1.4e-16 91.3 103 43.7
Os09g0134500 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D005739 1.8e-16 90.9 147 36.7
Phvul.008G018500 Phaseolus vulgaris HOM05D000590 ORTHO05D005739 1.8e-16 90.9 117 41.9
TAR362G0932 Trochodendron aralioides HOM05D000590 ORTHO05D005739 1.8e-16 90.9 97 48.5
VMungo1383G1517 Vigna mungo HOM05D000590 ORTHO05D005739 2.4e-16 90.5 102 43.1
Thhalv10006646m.g Eutrema salsugineum HOM05D000590 ORTHO05D005739 3.1e-16 90.1 103 46.6
CDE06G2342 Ceratophyllum demersum HOM05D000590 ORTHO05D005739 4.1e-16 89.7 100 45.0
CARHR005360 Cardamine hirsuta HOM05D000590 ORTHO05D005739 5.3e-16 89.4 153 37.3
Psat3g189880 Pisum sativum HOM05D000590 ORTHO05D005739 5.3e-16 89.4 102 40.2
TPR.G2958 Trifolium pratense HOM05D000590 ORTHO05D005739 6.9e-16 89.0 136 35.3
AT2G31650 Arabidopsis thaliana HOM05D000590 ORTHO05D005739 1.2e-15 88.2 186 30.6
Glyma.08G258500 Glycine max HOM05D000590 ORTHO05D005739 1.2e-15 88.2 137 35.0
Sp1g04640 Schrenkiella parvula HOM05D000590 ORTHO05D005739 1.2e-15 88.2 103 43.7
Aqoxy2G04044 Aquilegia oxysepala HOM05D000590 ORTHO05D005739 1.5e-15 87.8 142 36.6
AL1G15760 Arabidopsis lyrata HOM05D000590 ORTHO05D005739 1.5e-15 87.8 147 37.4
Ca_07101_v3 Cicer arietinum L. HOM05D000590 ORTHO05D005739 1.5e-15 87.8 102 42.2
Gohir.D10G130300 Gossypium hirsutum HOM05D000590 ORTHO05D005739 1.5e-15 87.8 80 56.2
SHI33758 Sapria himalayana HOM05D000590 ORTHO05D005739 1.5e-15 87.8 81 49.4
PSO017G6033 Papaver somniferum HOM05D000590 ORTHO05D005739 2.0e-15 87.4 98 45.9
AL4G26890 Arabidopsis lyrata HOM05D000590 ORTHO05D005739 2.6e-15 87.0 186 30.6
FvH4_4g12210 Fragaria vesca HOM05D000590 ORTHO05D005739 2.6e-15 87.0 80 50.0
Sc07g0007210 Simmondsia chinensis HOM05D000590 ORTHO05D005739 3.4e-15 86.7 92 47.8
MD04G1028600 Malus domestica HOM05D000590 ORTHO05D005739 4.5e-15 86.3 80 52.5
arahy.Tifrunner.gnm1.ann1.631JZ3 Arachis hypogaea HOM05D000590 ORTHO05D005739 5.9e-15 85.9 151 35.1
arahy.Tifrunner.gnm1.ann1.NCWU1I Arachis hypogaea HOM05D000590 ORTHO05D005739 5.9e-15 85.9 151 35.1
PSO675G4267 Papaver somniferum HOM05D000590 ORTHO05D005739 5.9e-15 85.9 98 45.9
BcaB06g28533 Brassica carinata HOM05D000590 ORTHO05D005739 1.0e-14 85.1 148 35.8
A04p24160 Brassica napus HOM05D000590 ORTHO05D005739 1.3e-14 84.7 184 32.1
BraA04t17936Z Brassica rapa HOM05D000590 ORTHO05D005739 1.3e-14 84.7 184 32.1
BolC4t27580H Brassica oleracea HOM05D000590 ORTHO05D005739 1.7e-14 84.3 185 33.0
Medtr7g021365 Medicago truncatula HOM05D000590 ORTHO05D005739 1.7e-14 84.3 137 33.6
C04p60890 Brassica napus HOM05D000590 ORTHO05D005739 2.9e-14 83.6 185 33.0
Carub.0004s1295 Capsella rubella HOM05D000590 ORTHO05D005739 2.9e-14 83.6 100 44.0
BraA09t42058Z Brassica rapa HOM05D004358 ORTHO05D005739 1.9e-13 80.9 113 41.6
AT1G05830 Arabidopsis thaliana HOM05D000590 ORTHO05D005739 3.2e-13 80.1 134 35.8
ATR0824G108 Amborella trichopoda HOM05D000590 ORTHO05D005739 5.5e-13 79.3 100 40.0
MBI11_g00125_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D005739 5.5e-13 79.3 122 38.5
A09p67280 Brassica napus HOM05D000590 ORTHO05D005739 7.2e-13 79.0 113 40.7
BolC8t52685H Brassica oleracea HOM05D000590 ORTHO05D005739 9.3e-13 78.6 113 40.7
Aa31LG1G8510 Aethionema arabicum HOM05D000590 ORTHO05D005739 1.6e-12 77.8 91 48.4
ClCG08G003700 Citrullus lanatus HOM05D000590 ORTHO05D005739 2.1e-12 77.4 172 31.4
Carub.0001s0518 Capsella rubella HOM05D000590 ORTHO05D005739 3.5e-12 76.6 103 41.7
CDE08G0067 Ceratophyllum demersum HOM05D000590 ORTHO05D005739 1.0e-11 75.1 133 36.1
Ah.12g062200 Amaranthus hybridus HOM05D000590 ORTHO05D005739 2.5e-10 70.5 150 32.7
BcaC07g42107 Brassica carinata HOM05D000590 ORTHO05D005739 3.3e-10 70.1 90 44.4
C08p51570 Brassica napus HOM05D000590 ORTHO05D005739 7.4e-10 68.9 80 47.5
Pp3c16_18950 Physcomitrium patens HOM05D000590 ORTHO05D005739 9.7e-10 68.6 100 39.0
Mapoly0051s0016 Marchantia polymorpha HOM05D000590 ORTHO05D005739 1.3e-09 68.2 107 34.6
Pp3c5_20190 Physcomitrium patens HOM05D000590 ORTHO05D005739 2.2e-09 67.4 83 41.0
Haze_11082 Corylus avellana HOM05D000590 ORTHO05D005739 6.3e-09 65.9 191 30.4
Hund15143 Selenicereus undatus HOM05D000590 ORTHO05D005739 1.1e-08 65.1 155 31.0
Pp3c6_7710 Physcomitrium patens HOM05D000590 ORTHO05D005739 2.4e-08 63.9 254 25.6
CBR_g9119 Chara braunii HOM05D000409 ORTHO05D000184 9.0e-08 62.0 70 40.0
Hund10609 Selenicereus undatus HOM05D000590 ORTHO05D005739 9.0e-08 62.0 112 32.1
SMO236G0090 Selaginella moellendorffii HOM05D000590 ORTHO05D005739 1.5e-07 61.2 76 36.8
ECA246G4952 Erigeron canadensis HOM05D002054 ORTHO05D004936 5.9e-07 59.3 102 30.4
FAN22G1397 Fragaria x ananassa HOM05D000590 ORTHO05D005739 5.9e-07 59.3 107 36.4
MD13G1278800 Malus domestica HOM05D000590 ORTHO05D005739 7.7e-07 58.9 146 34.2
Migut.E01505 Erythranthe guttata HOM05D002054 ORTHO05D004936 1.7e-06 57.8 58 43.1
FAN17G1987 Fragaria x ananassa HOM05D000590 ORTHO05D005739 2.2e-06 57.4 107 35.5
Mapoly0005s0005 Marchantia polymorpha HOM05D000966 ORTHO05D002384 2.9e-06 57.0 53 43.4
AagrBONN_evm.TU.Sc2ySwM_344.772 Anthoceros agrestis HOM05D000590 ORTHO05D005739 5.0e-06 56.2 153 29.4
AUR62032386 Chenopodium quinoa HOM05D002054 ORTHO05D004936 6.5e-06 55.8 57 45.6
CSS0040563 Camellia sinensis var. sinensis HOM05D002054 ORTHO05D004936 8.5e-06 55.5 124 30.6


User provided reference genes

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