Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 1.8e-162 575.9 294 100.0
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 6.2e-86 321.6 302 58.6
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 4.6e-81 305.4 302 57.6
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 1.2e-78 297.4 346 52.6
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 6.2e-78 295.0 297 55.9
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.1e-77 294.3 321 55.1
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 1.2e-73 280.8 297 53.9
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 2.1e-73 280.0 301 54.5
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 4.6e-73 278.9 308 53.6
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 1.3e-72 277.3 313 53.4
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 3.0e-72 276.2 308 52.6
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 3.9e-72 275.8 299 53.8
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 1.9e-71 273.5 305 53.1
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 2.5e-71 273.1 299 52.8
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 2.1e-70 270.0 306 54.6
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 2.1e-70 270.0 304 54.3
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 2.8e-70 269.6 304 52.3
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 8.1e-70 268.1 299 53.2
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 8.1e-70 268.1 329 49.5
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 2.4e-69 266.5 298 54.4
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 8.9e-69 264.6 299 53.8
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 1.2e-68 264.2 300 53.0
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 1.2e-68 264.2 301 52.5
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 1.5e-68 263.8 299 53.5
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 2.0e-68 263.5 301 52.2
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 9.9e-68 261.2 299 52.2
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 1.3e-67 260.8 299 53.5
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 2.2e-67 260.0 299 51.8
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 6.4e-67 258.5 297 52.9
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 3.2e-66 256.1 305 51.5
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 4.2e-66 255.8 314 49.4
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 4.2e-66 255.8 296 51.0
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 1.2e-65 254.2 296 53.4
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 1.6e-65 253.8 297 49.8
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 1.3e-64 250.8 338 47.0
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 3.0e-64 249.6 299 51.8
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 5.1e-64 248.8 320 46.9
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 6.6e-64 248.4 315 47.3
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 1.1e-63 247.7 315 47.6
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 1.5e-63 247.3 328 47.3
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 1.5e-63 247.3 302 49.7
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 1.9e-63 246.9 303 50.2
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 2.5e-63 246.5 305 50.8
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 3.3e-63 246.1 291 51.2
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 7.3e-63 245.0 270 50.7
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 1.3e-62 244.2 341 45.5
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 2.1e-62 243.4 305 49.2
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 4.8e-62 242.3 306 49.0
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 8.1e-62 241.5 308 46.8
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 8.1e-62 241.5 300 48.0
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 1.1e-61 241.1 301 49.2
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 1.1e-61 241.1 299 50.5
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.8e-61 240.4 297 48.8
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 4.0e-61 239.2 310 47.1
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 5.3e-61 238.8 325 44.9
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 9.0e-61 238.0 308 47.4
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 1.2e-60 237.7 306 47.7
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 1.5e-60 237.3 306 47.4
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 2.0e-60 236.9 216 59.7
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 2.0e-60 236.9 303 48.2
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 3.4e-60 236.1 322 46.0
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 4.5e-60 235.7 308 47.7
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 5.8e-60 235.3 325 46.5
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 1.3e-59 234.2 316 45.9
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 2.2e-59 233.4 307 47.6
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 2.9e-59 233.0 302 49.3
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 4.9e-59 232.3 297 43.8
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 6.4e-59 231.9 297 46.1
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 8.4e-59 231.5 295 47.1
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 1.4e-58 230.7 306 48.0
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 1.9e-58 230.3 303 45.9
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 2.4e-58 229.9 315 43.5
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 3.2e-58 229.6 297 43.4
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 5.4e-58 228.8 236 53.0
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 9.3e-58 228.0 308 44.5
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 1.2e-57 227.6 305 45.9
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 1.6e-57 227.3 300 46.0
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 1.6e-57 227.3 307 45.9
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 3.5e-57 226.1 295 44.7
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 4.6e-57 225.7 217 56.7
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 6.0e-57 225.3 302 46.4
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 1.0e-56 224.6 310 44.2
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 1.0e-56 224.6 320 47.2
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 3.0e-56 223.0 301 44.5
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 1.1e-55 221.1 325 43.7
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 1.5e-55 220.7 303 45.2
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 1.5e-55 220.7 303 45.2
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 1.9e-55 220.3 307 47.2
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 2.5e-55 219.9 320 43.8
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 2.5e-55 219.9 320 43.8
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 2.5e-55 219.9 320 43.8
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 2.5e-55 219.9 327 42.8
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 3.3e-55 219.5 309 43.0
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 3.3e-55 219.5 309 43.0
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 7.4e-55 218.4 310 43.5
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 3.1e-53 213.0 229 51.5
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 4.0e-53 212.6 315 43.8
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 4.0e-53 212.6 361 40.4
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 5.3e-53 212.2 276 48.9
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 6.9e-53 211.8 322 43.8
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 6.9e-53 211.8 301 44.2
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 6.9e-53 211.8 276 47.5
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 1.2e-52 211.1 297 44.8
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 2.9e-51 206.5 308 43.8
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 3.8e-51 206.1 304 45.1
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.1e-50 204.5 295 43.4
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 1.9e-50 203.8 303 44.2
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 3.2e-50 203.0 295 43.1
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 4.2e-50 202.6 307 44.0
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.2e-49 201.1 224 50.0
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 2.1e-49 200.3 309 42.1
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 3.5e-49 199.5 295 43.4
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 1.0e-48 198.0 300 40.7
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 1.3e-48 197.6 232 48.7
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 1.8e-48 197.2 302 43.7
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 2.3e-48 196.8 306 40.5
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 5.1e-48 195.7 301 41.9
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 1.6e-46 190.7 309 39.5
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 1.2e-44 184.5 313 39.3
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 2.6e-44 183.3 301 47.5
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 2.9e-43 179.9 296 42.9
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 3.8e-43 179.5 312 38.8
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 8.4e-43 178.3 299 42.5
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 7.1e-42 175.3 250 40.8
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 3.5e-41 172.9 309 39.5
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 1.8e-40 170.6 319 38.6
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 5.1e-40 169.1 158 61.4
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 8.2e-38 161.8 309 35.6
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 3.8e-35 152.9 370 32.4
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 6.5e-35 152.1 151 60.9
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 1.9e-34 150.6 268 39.2
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 5.5e-34 149.1 328 34.1
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 7.7e-28 128.6 133 55.6
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 6.5e-27 125.6 307 36.2
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 6.5e-27 125.6 307 36.2
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 1.4e-26 124.4 161 47.8
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 2.7e-25 120.2 189 42.3
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.7e-25 120.2 372 29.3
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.4e-24 117.9 358 31.8
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 3.0e-24 116.7 369 32.2
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.4e-23 112.8 350 31.4
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 9.7e-23 111.7 97 59.8
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.3e-19 101.3 361 30.5
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 2.2e-19 100.5 376 27.7
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 6.5e-19 99.0 262 37.0
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 8.5e-19 98.6 329 30.1
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 2.5e-18 97.1 157 42.0
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 7.2e-18 95.5 124 45.2
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 3.0e-16 90.1 167 34.7
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 1.1e-13 81.6 77 59.7
Pp3c18_7150 Physcomitrium patens HOM05D001401 ORTHO05D006368 5.0e-11 72.8 333 25.2
CBR_g41289 Chara braunii HOM05D004891 ORTHO05D006368 4.2e-10 69.7 174 33.9
SEGI_34742 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 4.7e-09 66.2 141 33.3
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 3.3e-07 60.1 42 69.0
FAN15G1877 Fragaria x ananassa HOM05D001401 ORTHO05D006368 5.7e-07 59.3 52 57.7
Haze_00106 Corylus avellana HOM05D004891 ORTHO05D005997 2.2e-06 57.4 152 30.9
SEGI_17958 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 2.2e-06 57.4 256 27.3


User provided reference genes

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