Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 7.9e-228 793.5 419 100.0
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 3.5e-135 485.7 439 62.2
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 3.0e-134 482.6 435 59.8
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 8.7e-134 481.1 439 62.0
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 7.3e-133 478.0 411 63.5
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 9.6e-133 477.6 386 66.8
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 9.6e-133 477.6 442 61.5
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 6.2e-132 474.9 398 63.1
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 1.1e-131 474.2 435 60.5
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 3.1e-131 472.6 386 66.8
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 3.1e-131 472.6 439 61.0
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 3.4e-130 469.2 442 60.6
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.4e-128 463.8 386 65.8
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 1.0e-126 457.6 426 60.3
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 1.8e-126 456.8 407 60.4
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 5.6e-125 451.8 385 66.0
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 7.4e-125 451.4 425 60.0
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 2.8e-124 449.5 399 62.2
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 4.8e-124 448.7 426 59.4
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 6.2e-124 448.4 384 62.8
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 5.3e-123 445.3 382 64.1
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 9.0e-123 444.5 396 59.8
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.2e-122 444.1 391 60.1
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 5.8e-122 441.8 387 61.5
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 1.3e-121 440.7 435 56.8
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 1.3e-121 440.7 404 59.7
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 1.1e-120 437.6 403 60.8
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 2.4e-120 436.4 383 62.4
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 5.5e-120 435.3 393 59.5
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 3.5e-119 432.6 394 59.4
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 1.8e-118 430.3 433 58.0
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 3.9e-118 429.1 387 61.2
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 1.1e-117 427.6 390 59.5
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 1.5e-117 427.2 406 58.4
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.5e-117 427.2 428 57.5
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 1.9e-117 426.8 429 55.0
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 4.3e-117 425.6 423 55.6
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 7.4e-117 424.9 405 56.5
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 7.4e-117 424.9 394 60.7
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 1.3e-116 424.1 451 56.1
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.3e-116 424.1 406 58.1
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 1.8e-115 420.2 394 56.3
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 5.3e-115 418.7 417 56.8
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 9.0e-115 417.9 296 73.0
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 1.2e-114 417.5 396 59.1
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 5.5e-112 408.7 512 49.0
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 5.7e-109 398.7 446 52.0
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 1.4e-107 394.0 443 52.1
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 3.1e-107 392.9 398 57.8
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 5.9e-106 388.7 386 55.7
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 1.1e-104 384.4 327 65.4
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 1.4e-104 384.0 419 53.0
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 5.5e-104 382.1 402 55.5
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 1.6e-103 380.6 429 51.5
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 2.7e-103 379.8 386 55.2
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 3.6e-103 379.4 388 54.6
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 4.6e-103 379.0 445 52.4
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 1.0e-102 377.9 419 52.3
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 5.1e-102 375.6 383 59.3
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 3.3e-101 372.9 387 54.3
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 4.3e-101 372.5 446 50.0
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 4.3e-101 372.5 432 51.9
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 4.3e-101 372.5 441 51.2
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 5.7e-101 372.1 383 54.0
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 2.8e-100 369.8 413 51.3
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 1.1e-99 367.9 445 50.1
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 5.3e-99 365.5 440 51.6
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 5.3e-99 365.5 445 49.0
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 5.3e-99 365.5 417 52.8
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.9e-99 365.2 302 64.9
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 9.1e-99 364.8 387 53.7
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 9.1e-99 364.8 330 63.0
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 2.0e-98 363.6 304 65.1
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 4.5e-98 362.5 444 48.9
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 5.9e-98 362.1 446 49.1
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 1.7e-97 360.5 318 62.6
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 1.9e-96 357.1 420 50.5
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 1.2e-95 354.4 457 47.7
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 1.8e-94 350.5 353 56.9
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 3.0e-94 349.7 450 48.7
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 1.5e-93 347.4 401 49.6
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 2.4e-91 340.1 371 52.3
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 5.3e-91 339.0 450 47.1
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 6.9e-91 338.6 449 47.7
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 2.7e-87 326.6 341 53.7
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 3.5e-82 309.7 391 47.3
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 3.2e-80 303.1 383 48.3
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 5.5e-80 302.4 451 43.7
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 4.7e-79 299.3 554 40.4
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 1.2e-77 294.7 217 69.1
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 3.3e-77 293.1 386 46.1
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 7.7e-74 282.0 400 44.8
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 6.5e-73 278.9 201 69.2
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 2.5e-72 276.9 411 43.1
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 8.0e-71 271.9 374 45.7
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 2.2e-68 263.8 348 44.8
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 9.5e-64 248.4 250 52.0
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 1.2e-63 248.1 451 39.2
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 3.6e-63 246.5 288 49.0
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 3.4e-45 186.8 382 36.6
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 9.8e-45 185.3 324 38.0
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 1.2e-39 168.3 382 33.8
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 4.0e-38 163.3 385 33.0
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 8.9e-38 162.2 247 43.7
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 1.5e-37 161.4 386 32.9
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 1.3e-36 158.3 280 40.4
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 6.4e-36 156.0 112 70.5
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 6.4e-36 156.0 425 31.1
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 1.5e-32 144.8 154 53.2
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 2.4e-27 127.5 464 27.8
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 9.6e-24 115.5 95 62.1
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 3.4e-21 107.1 164 46.3
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 2.1e-18 97.8 79 70.9
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 3.5e-18 97.1 221 36.7
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.8e-14 84.7 100 54.0
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 4.5e-13 80.1 96 49.0
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 9.9e-13 79.0 96 45.8
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 6.0e-10 69.7 86 47.7
TPR.G40448 Trifolium pratense HOM05D006045 ORTHO05D007678 2.8e-07 60.8 59 55.9
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 1.4e-06 58.5 71 49.3


User provided reference genes

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