Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 7.0e-39 163.3 73 100.0
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 4.2e-36 154.1 73 91.8
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 9.4e-36 152.9 73 90.4
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 2.7e-35 151.4 73 89.0
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.7e-35 151.4 73 89.0
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 3.6e-35 151.0 73 90.4
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 3.6e-35 151.0 71 91.5
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 6.1e-35 150.2 73 89.0
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 8.0e-35 149.8 73 87.7
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.0e-34 149.4 71 90.1
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.0e-34 149.4 70 91.4
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.0e-34 149.4 73 89.0
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 1.0e-34 149.4 72 90.3
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.4e-34 149.1 73 89.0
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 2.3e-34 148.3 71 93.0
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 3.0e-34 147.9 73 87.7
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 3.0e-34 147.9 71 91.5
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 6.8e-34 146.7 72 86.1
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.8e-34 146.7 73 87.7
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.0e-33 145.2 73 87.7
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 2.0e-33 145.2 73 87.7
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 2.0e-33 145.2 71 88.7
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 2.0e-33 145.2 73 86.3
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 2.6e-33 144.8 73 84.9
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 3.4e-33 144.4 72 83.3
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 3.4e-33 144.4 66 93.9
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 5.7e-33 143.7 73 84.9
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.5e-33 143.3 73 84.9
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 9.7e-33 142.9 73 84.9
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 9.7e-33 142.9 71 84.5
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 9.7e-33 142.9 73 87.7
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 9.7e-33 142.9 72 84.7
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.3e-32 142.5 73 84.9
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.3e-32 142.5 72 84.7
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 2.2e-32 141.7 69 84.1
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 2.8e-32 141.4 72 81.9
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 4.8e-32 140.6 72 79.2
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 4.8e-32 140.6 71 85.9
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 4.8e-32 140.6 73 89.0
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 4.8e-32 140.6 72 80.6
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 4.8e-32 140.6 73 83.6
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 6.3e-32 140.2 72 83.3
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 6.3e-32 140.2 72 84.7
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 8.3e-32 139.8 73 82.2
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 8.3e-32 139.8 73 82.2
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 8.3e-32 139.8 73 82.2
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 8.3e-32 139.8 72 81.9
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 1.8e-31 138.7 72 81.9
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 2.4e-31 138.3 74 81.1
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 3.1e-31 137.9 70 81.4
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 4.1e-31 137.5 67 85.1
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 4.1e-31 137.5 67 85.1
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 4.1e-31 137.5 67 85.1
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 4.1e-31 137.5 67 85.1
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 4.1e-31 137.5 67 85.1
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 4.1e-31 137.5 67 85.1
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 4.1e-31 137.5 74 81.1
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 4.1e-31 137.5 74 81.1
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 4.1e-31 137.5 78 80.8
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 5.3e-31 137.1 74 79.7
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 5.3e-31 137.1 69 84.1
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 5.3e-31 137.1 72 76.4
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 5.3e-31 137.1 71 81.7
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 7.0e-31 136.7 72 79.2
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 1.2e-30 136.0 70 81.4
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 1.6e-30 135.6 66 84.8
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.6e-30 135.6 66 87.9
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 1.6e-30 135.6 72 77.8
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 2.0e-30 135.2 67 82.1
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 2.7e-30 134.8 67 82.1
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 5.9e-30 133.7 76 78.9
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 5.9e-30 133.7 72 77.8
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 7.7e-30 133.3 72 79.2
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 7.7e-30 133.3 80 77.5
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 1.0e-29 132.9 73 78.1
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 5.0e-29 130.6 72 75.0
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 1.1e-28 129.4 70 78.6
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.5e-28 129.0 66 80.3
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 2.5e-28 128.3 71 73.2
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 9.4e-28 126.3 66 81.8
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 1.6e-27 125.6 70 81.4
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 2.1e-27 125.2 67 76.1
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 2.3e-26 121.7 71 69.0
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 5.2e-26 120.6 74 73.0
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 1.5e-25 119.0 58 87.9
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 4.4e-25 117.5 54 96.3
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 1.7e-24 115.5 54 90.7
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 3.7e-24 114.4 54 92.6
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 6.3e-24 113.6 65 78.5
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 8.3e-24 113.2 54 88.9
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 8.3e-24 113.2 54 90.7
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.1e-23 112.8 53 90.6
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 3.1e-23 111.3 54 90.7
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 1.3e-21 105.9 53 83.0
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.7e-21 105.5 65 72.3
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 5.0e-21 104.0 63 65.1
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 1.6e-19 99.0 47 89.4
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 1.7e-16 89.0 63 65.1
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 2.2e-16 88.6 60 53.3
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 1.3e-08 62.8 34 73.5


User provided reference genes

Program Settings