Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 8.2e-86 320.5 175 100.0
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 1.7e-78 296.2 175 93.1
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.2e-49 200.3 178 65.2
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 1.6e-49 199.9 178 64.6
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 1.0e-48 197.2 177 63.8
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 8.3e-46 187.6 177 59.9
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 8.3e-46 187.6 175 60.0
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 1.4e-45 186.8 166 62.0
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 1.8e-45 186.4 175 57.7
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 2.7e-44 182.6 175 57.1
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 3.5e-44 182.2 174 59.2
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 5.9e-44 181.4 176 55.7
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 3.8e-43 178.7 176 56.2
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 3.8e-43 178.7 175 57.7
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 6.6e-43 177.9 175 58.3
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 1.5e-42 176.8 175 57.1
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 1.5e-42 176.8 174 55.7
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 1.9e-42 176.4 176 56.8
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 9.5e-42 174.1 175 50.9
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.8e-40 169.9 175 55.4
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.8e-40 169.9 175 56.0
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 2.3e-40 169.5 175 57.7
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 3.0e-40 169.1 177 57.6
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 6.8e-40 167.9 175 52.6
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 6.8e-40 167.9 175 54.9
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 8.9e-40 167.5 175 54.9
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 1.5e-39 166.8 175 57.7
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 2.6e-39 166.0 178 55.1
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 4.4e-39 165.2 183 50.3
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 5.7e-39 164.9 175 56.6
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 5.7e-39 164.9 175 54.9
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 1.7e-38 163.3 175 53.7
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 1.7e-38 163.3 175 53.7
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 3.7e-38 162.2 175 52.6
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 3.7e-38 162.2 175 52.6
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 4.9e-38 161.8 175 52.0
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 6.4e-38 161.4 175 52.6
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 8.3e-38 161.0 175 52.6
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 1.4e-37 160.2 173 53.2
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 1.4e-37 160.2 158 58.2
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 1.8e-37 159.8 177 51.4
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 2.4e-37 159.5 175 51.4
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 4.1e-37 158.7 175 55.4
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 5.4e-37 158.3 175 50.9
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 1.2e-36 157.1 180 48.9
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 2.0e-36 156.4 177 50.3
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 2.0e-36 156.4 175 53.7
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 2.7e-36 156.0 175 52.0
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 8.6e-35 151.0 177 49.7
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 1.9e-34 149.8 168 48.8
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 7.3e-34 147.9 175 50.9
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 1.2e-33 147.1 168 48.2
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 8.0e-33 144.4 175 51.4
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 6.8e-32 141.4 177 48.6
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 5.8e-31 138.3 170 49.4
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.7e-30 136.7 149 51.7
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 2.2e-30 136.3 176 50.6
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 4.9e-30 135.2 175 46.9
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 1.9e-29 133.3 175 46.3
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 2.4e-29 132.9 127 59.1
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.2e-29 132.5 175 46.9
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 3.2e-29 132.5 175 46.9
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 5.4e-29 131.7 175 44.6
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 7.0e-29 131.3 175 46.3
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 1.2e-28 130.6 175 46.3
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 2.7e-28 129.4 175 45.1
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 3.5e-28 129.0 175 45.1
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 3.5e-28 129.0 153 51.0
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 4.6e-28 128.6 183 42.1
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 6.0e-28 128.3 182 43.4
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 6.0e-28 128.3 175 42.3
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 6.0e-28 128.3 157 51.0
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 6.0e-28 128.3 175 44.6
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 1.0e-27 127.5 176 43.8
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 1.3e-27 127.1 176 43.8
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 1.3e-27 127.1 176 43.8
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 1.3e-27 127.1 176 43.8
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 2.3e-27 126.3 178 43.3
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 2.3e-27 126.3 178 43.3
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 3.0e-27 125.9 183 43.7
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 3.9e-27 125.6 180 47.2
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 6.6e-27 124.8 177 46.9
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 8.6e-27 124.4 183 40.4
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 1.9e-26 123.2 173 41.0
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 2.1e-25 119.8 184 39.7
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 3.6e-25 119.0 183 42.1
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 1.4e-24 117.1 149 42.3
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 2.3e-24 116.3 205 41.5
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 6.8e-24 114.8 172 41.9
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 7.5e-23 111.3 182 41.8
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 1.3e-22 110.5 183 39.9
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 2.2e-22 109.8 183 38.8
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 1.4e-21 107.1 151 43.7
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 1.9e-21 106.7 127 46.5
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 5.4e-21 105.1 180 40.0
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.2e-20 104.0 183 38.8
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 2.7e-20 102.8 124 48.4
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 1.0e-19 100.9 148 41.2
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 1.3e-19 100.5 130 48.5
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 5.6e-18 95.1 118 45.8
TAR125G0001 Trochodendron aralioides HOM05D006478 ORTHO05D008071 6.2e-17 91.7 167 35.9
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 3.1e-16 89.4 172 33.1
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 3.1e-16 89.4 119 47.9
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 1.5e-15 87.0 109 45.9
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 5.8e-15 85.1 176 32.4
Hund04605 Selenicereus undatus HOM05D006478 ORTHO05D008071 2.2e-14 83.2 110 43.6
Oeu014948.1 Olea europaea HOM05D006478 ORTHO05D008071 2.9e-14 82.8 175 33.1
Sed0011118 Sechium edule HOM05D006478 ORTHO05D008071 3.7e-14 82.4 175 33.7
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 1.1e-13 80.9 92 48.9
VMungo1127G0460 Vigna mungo HOM05D006478 ORTHO05D008071 2.4e-13 79.7 137 33.6
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 5.1e-11 72.0 48 75.0
CiPaw.05G217800 Carya illinoinensis HOM05D006478 ORTHO05D008071 5.6e-10 68.6 73 50.7
Actinidia03077 Actinidia chinensis HOM05D006478 ORTHO05D008071 4.7e-09 65.5 177 34.5
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 4.0e-08 62.4 50 68.0
Lj1g0017005 Lotus japonicus HOM05D006478 ORTHO05D008071 6.8e-08 61.6 146 30.1
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 5.8e-07 58.5 170 27.1
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 7.6e-07 58.2 70 50.0
HPP92_020994 Vanilla planifolia HOM05D006478 ORTHO05D008071 7.6e-07 58.2 101 35.6


User provided reference genes

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