Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028717 Daucus carota HOM05D007609 ORTHO05D009539 4.0e-46 187.6 85 100.0
CSS0012617 Camellia sinensis var. sinensis HOM05D007609 ORTHO05D009539 4.6e-10 67.8 66 51.5
Thecc.09G111700 Theobroma cacao HOM05D007609 ORTHO05D009539 7.9e-10 67.0 79 43.0
Hma1.2p1_0092F.1_g046650 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 1.4e-09 66.2 59 52.5
Lsat_1_v5_gn_5_101501 Lactuca sativa HOM05D007609 ORTHO05D009539 6.7e-09 63.9 34 73.5
Cpa.g.sc451.1 Carica papaya HOM05D007609 ORTHO05D009539 8.8e-09 63.5 32 71.9
HanXRQChr10g0317871 Helianthus annuus HOM05D007609 ORTHO05D009539 8.8e-09 63.5 66 47.0
TAR626G0143 Trochodendron aralioides HOM05D007609 ORTHO05D025968 8.8e-09 63.5 76 46.1
AUR62011005 Chenopodium quinoa HOM05D007609 ORTHO05D009539 1.1e-08 63.2 59 47.5
Hma1.2p1_0018F.1_g013450 Hydrangea macrophylla HOM05D007609 ORTHO05D009539 1.1e-08 63.2 66 47.0
AUR62021516 Chenopodium quinoa HOM05D007609 ORTHO05D009539 1.5e-08 62.8 59 47.5
Gohir.A07G006801 Gossypium hirsutum HOM05D007609 ORTHO05D009539 1.5e-08 62.8 29 79.3
Gohir.D07G005100 Gossypium hirsutum HOM05D007609 ORTHO05D009539 1.5e-08 62.8 63 50.8
Gorai.001G004700 Gossypium raimondii HOM05D007609 ORTHO05D009539 1.5e-08 62.8 29 79.3
Rhsim08G0221700 Rhododendron simsii HOM05D007609 ORTHO05D009539 1.5e-08 62.8 30 70.0
Aqoxy7G01699 Aquilegia oxysepala HOM05D007609 ORTHO05D009539 1.9e-08 62.4 85 41.2
TAR383G0714 Trochodendron aralioides HOM05D007609 ORTHO05D009539 3.3e-08 61.6 67 46.3
Ciclev10010038m.g Citrus clementina HOM05D007609 ORTHO05D009539 4.3e-08 61.2 26 80.8
vmacro18908 Vaccinium macrocarpon HOM05D007609 ORTHO05D009539 5.7e-08 60.8 29 79.3
Gohir.D08G261700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 7.4e-08 60.5 79 41.8
Gorai.004G279800 Gossypium raimondii HOM05D007609 ORTHO05D009539 7.4e-08 60.5 79 41.8
Gohir.A08G241000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 9.7e-08 60.1 79 41.8
Ah.14g081870 Amaranthus hybridus HOM05D007609 ORTHO05D009539 1.3e-07 59.7 48 50.0
DCAR_023052 Daucus carota HOM05D007609 ORTHO05D009539 1.7e-07 59.3 50 52.0
Gohir.A06G061700 Gossypium hirsutum HOM05D007609 ORTHO05D009539 2.8e-07 58.5 29 72.4
Gohir.D06G060000 Gossypium hirsutum HOM05D007609 ORTHO05D009539 2.8e-07 58.5 29 72.4
Gorai.010G069800 Gossypium raimondii HOM05D007609 ORTHO05D009539 2.8e-07 58.5 29 72.4
Manes.16G116800 Manihot esculenta HOM05D007609 ORTHO05D009539 2.8e-07 58.5 34 64.7
Nn2g11764 Nelumbo nucifera HOM05D007609 ORTHO05D009539 2.8e-07 58.5 36 63.9
Sc18g0001160 Simmondsia chinensis HOM05D007609 ORTHO05D009539 2.8e-07 58.5 35 62.9
Cfa003264 Carpinus fangiana HOM05D007609 ORTHO05D009539 3.7e-07 58.2 70 45.7
COL.COLO4_34908 Corchorus olitorius HOM05D007609 ORTHO05D009539 3.7e-07 58.2 29 72.4
Haze_25706 Corylus avellana HOM05D007609 ORTHO05D009539 3.7e-07 58.2 73 45.2
ECA232G3029 Erigeron canadensis HOM05D007609 ORTHO05D009539 3.7e-07 58.2 42 57.1
Eucgr.C03849 Eucalyptus grandis HOM05D007609 ORTHO05D009539 3.7e-07 58.2 51 51.0
Lsat_1_v5_gn_4_103641 Lactuca sativa HOM05D007609 ORTHO05D009539 6.3e-07 57.4 25 80.0
Sabra18G0066900 Salix brachista HOM05D007609 ORTHO05D009539 6.3e-07 57.4 58 43.1
Potri.018G078900 Populus trichocarpa HOM05D007609 ORTHO05D009539 8.2e-07 57.0 34 58.8
Prupe.7G229700 Prunus persica HOM05D007609 ORTHO05D009539 8.2e-07 57.0 26 80.8
Solyc03g120160.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 8.2e-07 57.0 34 64.7
PGSC0003DMG400016536 Solanum tuberosum HOM05D007609 ORTHO05D009539 8.2e-07 57.0 29 65.5
ATR0559G294 Amborella trichopoda HOM05D007609 ORTHO05D009539 1.1e-06 56.6 34 61.8
Ca_25525_v3 Cicer arietinum L. HOM05D007609 ORTHO05D009539 1.1e-06 56.6 28 71.4
Manes.03G019500 Manihot esculenta HOM05D007609 ORTHO05D009539 1.1e-06 56.6 29 65.5
Solyc06g066700.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 1.1e-06 56.6 29 65.5
FvH4_1g05030 Fragaria vesca HOM05D007609 ORTHO05D009539 1.4e-06 56.2 37 59.5
FAN26G1953 Fragaria x ananassa HOM05D007609 ORTHO05D009539 1.4e-06 56.2 37 59.5
FAN26G2876 Fragaria x ananassa HOM05D007609 ORTHO05D009539 1.4e-06 56.2 37 59.5
Nitab4.5_0000351g0200 Nicotiana tabacum HOM05D007609 ORTHO05D009539 1.4e-06 56.2 26 73.1
Peaxi162Scf00015g00416 Petunia axillaris HOM05D007609 ORTHO05D009539 1.4e-06 56.2 68 38.2
Sopen03g039040 Solanum pennellii HOM05D007609 ORTHO05D009539 1.4e-06 56.2 39 64.1
FAN23G1574 Fragaria x ananassa HOM05D007609 ORTHO05D009539 1.8e-06 55.8 37 56.8
Peaxi162Scf00207g00095 Petunia axillaris HOM05D007609 ORTHO05D009539 1.8e-06 55.8 25 76.0
Potri.006G159300 Populus trichocarpa HOM05D007609 ORTHO05D009539 1.8e-06 55.8 41 48.8
Solyc03g120155.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 1.8e-06 55.8 27 74.1
Sopen03g039030 Solanum pennellii HOM05D007609 ORTHO05D009539 1.8e-06 55.8 27 74.1
PGSC0003DMG400005604 Solanum tuberosum HOM05D007609 ORTHO05D009539 1.8e-06 55.8 25 80.0
Medtr8g083460 Medicago truncatula HOM05D007609 ORTHO05D009539 2.4e-06 55.5 29 65.5
Glyma.07G087100 Glycine max HOM05D007609 ORTHO05D009539 5.3e-06 54.3 55 47.3
Sopen06g024990 Solanum pennellii HOM05D007609 ORTHO05D009539 5.3e-06 54.3 29 62.1
MELO3C024233.2 Cucumis melo HOM05D010933 ORTHO05D013136 6.9e-06 53.9 47 48.9
Glyma.09G189800 Glycine max HOM05D007609 ORTHO05D009539 6.9e-06 53.9 26 69.2
Medtr6g086445 Medicago truncatula HOM05D007609 ORTHO05D009539 6.9e-06 53.9 26 69.2
Nitab4.5_0003351g0110 Nicotiana tabacum HOM05D007609 ORTHO05D009539 6.9e-06 53.9 31 61.3
Nitab4.5_0005851g0050 Nicotiana tabacum HOM05D007609 ORTHO05D009539 6.9e-06 53.9 24 75.0
Sed0016972 Sechium edule HOM05D007609 ORTHO05D009539 6.9e-06 53.9 24 79.2
PGSC0003DMG400005605 Solanum tuberosum HOM05D007609 ORTHO05D009539 6.9e-06 53.9 34 55.9
TPR.G35275 Trifolium pratense HOM05D007609 ORTHO05D009539 6.9e-06 53.9 26 69.2
FAN28G0995 Fragaria x ananassa HOM05D007609 ORTHO05D009539 9.1e-06 53.5 29 72.4
RcHm_v2.0_Chr2g0090641 Rosa chinensis HOM05D007609 ORTHO05D009539 9.1e-06 53.5 29 72.4


User provided reference genes

Program Settings