Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 3.0e-38 161.4 84 100.0
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 8.9e-30 133.3 127 62.2
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 8.4e-12 73.6 52 65.4
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.1e-11 73.2 68 54.4
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 1.1e-11 73.2 68 54.4
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 1.4e-11 72.8 89 44.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 3.2e-11 71.6 67 52.2
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.1e-11 71.2 57 57.9
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 7.1e-11 70.5 48 70.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 7.1e-11 70.5 68 54.4
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 7.1e-11 70.5 89 44.9
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 9.2e-11 70.1 48 70.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 9.2e-11 70.1 69 56.5
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.2e-10 69.7 70 48.6
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.6e-10 69.3 52 63.5
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.6e-10 69.3 66 50.0
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.6e-10 69.3 42 78.6
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 1.6e-10 69.3 42 81.0
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.1e-10 68.9 39 82.1
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 2.1e-10 68.9 51 64.7
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.1e-10 68.9 38 84.2
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 2.7e-10 68.6 78 46.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 2.7e-10 68.6 42 78.6
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.5e-10 68.2 37 86.5
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 4.6e-10 67.8 47 74.5
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 4.6e-10 67.8 47 74.5
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 4.6e-10 67.8 41 80.5
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 6.0e-10 67.4 73 45.2
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 7.8e-10 67.0 38 81.6
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 7.8e-10 67.0 38 81.6
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 7.8e-10 67.0 47 76.6
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.0e-09 66.6 44 72.7
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.0e-09 66.6 37 83.8
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.0e-09 66.6 41 78.0
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-09 66.2 51 64.7
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 1.3e-09 66.2 49 63.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 1.3e-09 66.2 42 73.8
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.3e-09 66.2 67 52.2
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.7e-09 65.9 78 46.2
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.7e-09 65.9 40 82.5
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.7e-09 65.9 50 60.0
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.7e-09 65.9 51 60.8
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.7e-09 65.9 43 74.4
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 2.3e-09 65.5 52 61.5
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 2.3e-09 65.5 42 76.2
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.3e-09 65.5 42 76.2
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.3e-09 65.5 44 68.2
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 2.3e-09 65.5 42 73.8
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 2.3e-09 65.5 42 73.8
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 3.0e-09 65.1 44 72.7
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 3.0e-09 65.1 41 73.2
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.0e-09 65.1 41 75.6
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.0e-09 65.1 73 46.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 3.0e-09 65.1 50 62.0
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 3.0e-09 65.1 42 73.8
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.9e-09 64.7 52 59.6
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 3.9e-09 64.7 85 43.5
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 3.9e-09 64.7 41 75.6
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.9e-09 64.7 57 54.4
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 3.9e-09 64.7 41 75.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 5.1e-09 64.3 52 59.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 6.6e-09 63.9 66 47.0
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 6.6e-09 63.9 37 75.7
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 6.6e-09 63.9 42 71.4
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 6.6e-09 63.9 42 73.8
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 6.6e-09 63.9 42 73.8
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 8.7e-09 63.5 51 60.8
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 8.7e-09 63.5 44 65.9
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 8.7e-09 63.5 42 71.4
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 8.7e-09 63.5 41 70.7
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 8.7e-09 63.5 62 56.5
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 8.7e-09 63.5 50 58.0
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.1e-08 63.2 50 62.0
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.1e-08 63.2 41 70.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.1e-08 63.2 44 65.9
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.1e-08 63.2 50 58.0
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.5e-08 62.8 40 75.0
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.5e-08 62.0 40 75.0
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.5e-08 62.0 40 75.0
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.5e-08 62.0 40 75.0
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 2.5e-08 62.0 40 75.0
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.5e-08 62.0 51 60.8
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.5e-08 62.0 51 60.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 3.3e-08 61.6 48 58.3
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 4.3e-08 61.2 41 68.3
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 4.3e-08 61.2 47 66.0
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 5.6e-08 60.8 53 58.5
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.3e-08 60.5 38 73.7
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 7.3e-08 60.5 41 65.9
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 9.6e-08 60.1 61 45.9
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.2e-07 59.7 50 56.0
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-07 59.7 51 58.8
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.2e-07 59.7 47 63.8
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.6e-07 59.3 40 70.0
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.1e-07 58.9 50 52.0
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.8e-07 58.5 40 67.5
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 2.8e-07 58.5 40 67.5
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.8e-07 58.5 40 67.5
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 2.8e-07 58.5 39 69.2
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 2.8e-07 58.5 50 56.0
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 3.6e-07 58.2 60 48.3
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 3.6e-07 58.2 60 48.3
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.6e-07 58.2 41 65.9
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 4.7e-07 57.8 38 63.2
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.8e-06 55.8 50 50.0
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 6.9e-06 53.9 38 63.2


User provided reference genes

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