Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_028590 Daucus carota HOM05D007990 ORTHO05D009984 6.9e-96 354.0 181 100.0
DCAR_032237 Daucus carota HOM05D007990 ORTHO05D009984 3.2e-69 265.4 181 76.2
Hma1.2p1_0798F.1_g219830 Hydrangea macrophylla HOM05D007990 ORTHO05D009984 1.1e-19 100.9 182 45.1
Dinv36767 Davidia involucrata HOM05D007990 ORTHO05D009984 2.2e-17 93.2 172 37.8
Hma1.2p1_2664F.1_g326450 Hydrangea macrophylla HOM05D007990 ORTHO05D009984 2.4e-16 89.7 108 52.8
SGA_v2.0_scaffold62G21609 Striga asiatica HOM05D007990 ORTHO05D009984 1.2e-15 87.4 151 39.1
TWI32G0510 Tripterygium wilfordii HOM05D007990 ORTHO05D009984 2.1e-15 86.7 182 39.0
ClCG11G001750 Citrullus lanatus HOM05D007990 ORTHO05D009984 1.3e-14 84.0 181 34.8
Migut.J00619 Erythranthe guttata HOM05D007990 ORTHO05D009984 3.9e-14 82.4 153 41.2
Nitab4.5_0004526g0040 Nicotiana tabacum HOM05D007990 ORTHO05D009984 6.6e-14 81.6 183 35.0
TWI63G1466 Tripterygium wilfordii HOM05D007990 ORTHO05D009984 6.6e-14 81.6 149 40.3
Manes.03G033800 Manihot esculenta HOM05D007990 ORTHO05D009984 1.5e-13 80.5 155 42.6
Gohir.A07G011300 Gossypium hirsutum HOM05D007990 ORTHO05D009984 1.9e-13 80.1 183 34.4
Lsat_1_v5_gn_5_142501 Lactuca sativa HOM05D007990 ORTHO05D009984 2.5e-13 79.7 144 41.0
CiPaw.03G215900 Carya illinoinensis HOM05D007990 ORTHO05D009984 7.3e-13 78.2 161 39.8
CsaV3_2G001460 Cucumis sativus L. HOM05D007990 ORTHO05D009984 7.3e-13 78.2 175 33.7
MELO3C004625.2 Cucumis melo HOM05D007990 ORTHO05D009984 9.6e-13 77.8 160 35.6
Lj7P676T16 Lonicera japonica HOM05D007990 ORTHO05D009984 1.6e-12 77.0 76 52.6
Nitab4.5_0006552g0010 Nicotiana tabacum HOM05D007990 ORTHO05D009984 1.6e-12 77.0 204 35.3
Gohir.D07G011200 Gossypium hirsutum HOM05D007990 ORTHO05D009984 2.8e-12 76.3 183 36.6
Gorai.001G011900 Gossypium raimondii HOM05D007990 ORTHO05D009984 2.8e-12 76.3 183 36.6
COL.COLO4_18199 Corchorus olitorius HOM05D007990 ORTHO05D009984 4.7e-12 75.5 140 38.6
HanXRQChr10g0319321 Helianthus annuus HOM05D007990 ORTHO05D009984 4.7e-12 75.5 149 38.9
Atru.chr7.1590 Acer truncatum HOM05D007990 ORTHO05D009984 1.1e-11 74.3 165 37.6
Actinidia29902 Actinidia chinensis HOM05D007990 ORTHO05D009984 1.4e-11 73.9 146 39.7
AT5G56880 Arabidopsis thaliana HOM05D007990 ORTHO05D009984 1.4e-11 73.9 160 38.1
Ciclev10010560m.g Citrus clementina HOM05D007990 ORTHO05D009984 1.8e-11 73.6 201 33.3
FAN26G2796 Fragaria x ananassa HOM05D023113 ORTHO05D009984 2.4e-11 73.2 143 41.3
AL8G32730 Arabidopsis lyrata HOM05D007990 ORTHO05D009984 3.1e-11 72.8 121 43.8
Duzib168G0718 Durio zibethinus HOM05D007990 ORTHO05D009984 3.1e-11 72.8 194 35.6
Sed0000223 Sechium edule HOM05D007990 ORTHO05D009984 4.0e-11 72.4 135 37.8
FAN26G0609 Fragaria x ananassa HOM05D023113 ORTHO05D009984 5.2e-11 72.0 143 41.3
Oeu041221.1 Olea europaea HOM05D007990 ORTHO05D009984 5.2e-11 72.0 142 35.2
FvH4_1g07430 Fragaria vesca HOM05D023113 ORTHO05D009984 6.8e-11 71.6 143 40.6
FAN19G1041 Fragaria x ananassa HOM05D023113 ORTHO05D009984 6.8e-11 71.6 143 40.6
FAN28G0129 Fragaria x ananassa HOM05D023113 ORTHO05D009984 2.6e-10 69.7 130 40.8
Thecc.09G089300 Theobroma cacao HOM05D007990 ORTHO05D009984 2.6e-10 69.7 176 36.9
Thhalv10015576m.g Eutrema salsugineum HOM05D007990 ORTHO05D009984 3.4e-10 69.3 157 36.9
Cc06_g11410 Coffea canephora HOM05D007990 ORTHO05D009984 5.8e-10 68.6 106 38.7
Haze_25914 Corylus avellana HOM05D007990 ORTHO05D009984 5.8e-10 68.6 141 40.4
Cfa003085 Carpinus fangiana HOM05D007990 ORTHO05D009984 1.7e-09 67.0 139 38.1
Rhsim03G0232200 Rhododendron simsii HOM05D007990 ORTHO05D009984 2.9e-09 66.2 210 30.0
Sc18g0001980 Simmondsia chinensis HOM05D007990 ORTHO05D009984 2.9e-09 66.2 178 35.4
QL02p062610 Quercus lobata HOM05D007990 ORTHO05D009984 3.8e-09 65.9 185 37.8
Ah.09g228280 Amaranthus hybridus HOM05D007990 ORTHO05D009984 4.9e-09 65.5 96 42.7
CARHR270630 Cardamine hirsuta HOM05D007990 ORTHO05D009984 4.9e-09 65.5 168 33.9
ECA234G1790 Erigeron canadensis HOM05D007990 ORTHO05D009984 6.4e-09 65.1 151 37.7
Gohir.D06G071200 Gossypium hirsutum HOM05D007990 ORTHO05D009984 1.9e-08 63.5 125 38.4
C03p15320 Brassica napus HOM05D007990 ORTHO05D009984 4.2e-08 62.4 121 40.5
Gorai.010G083000 Gossypium raimondii HOM05D007990 ORTHO05D009984 4.2e-08 62.4 134 38.8
Gohir.A06G072600 Gossypium hirsutum HOM05D007990 ORTHO05D009984 5.4e-08 62.0 134 38.1
HanXRQChr12g0354891 Helianthus annuus HOM05D007990 ORTHO05D009984 1.2e-07 60.8 99 37.4
A03p13100 Brassica napus HOM05D007990 ORTHO05D009984 1.6e-07 60.5 123 36.6
BolC3t13974H Brassica oleracea HOM05D007990 ORTHO05D009984 1.6e-07 60.5 123 36.6
BraA03t10620Z Brassica rapa HOM05D007990 ORTHO05D009984 1.6e-07 60.5 123 36.6
Sp6g18600 Schrenkiella parvula HOM05D007990 ORTHO05D009984 1.6e-07 60.5 177 32.8
BcaB08g36048 Brassica carinata HOM05D007990 ORTHO05D009984 2.1e-07 60.1 170 31.8
PGR102G1891 Punica granatum HOM05D007990 ORTHO05D009984 2.1e-07 60.1 141 38.3
C09p48510 Brassica napus HOM05D007990 ORTHO05D009984 3.5e-07 59.3 113 39.8
CANSAT56G4255 Cannabis sativa HOM05D007990 ORTHO05D009984 4.6e-07 58.9 112 40.2
Carub.0008s1734 Capsella rubella HOM05D007990 ORTHO05D009984 7.8e-07 58.2 110 39.1
Medtr4g126310 Medicago truncatula HOM05D007990 ORTHO05D009984 1.7e-06 57.0 81 40.7
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 1.7e-06 57.0 71 47.9
BcaB01g04425 Brassica carinata HOM05D007990 ORTHO05D009984 2.3e-06 56.6 186 29.0
BcaC04g20046 Brassica carinata HOM05D007990 ORTHO05D009984 3.9e-06 55.8 113 38.9
BolC9t57693H Brassica oleracea HOM05D007990 ORTHO05D009984 3.9e-06 55.8 113 38.9
Ca_21278_v3 Cicer arietinum L. HOM05D007990 ORTHO05D009984 3.9e-06 55.8 73 45.2
THA.LOC104813262 Tarenaya hassleriana HOM05D007990 ORTHO05D009984 3.9e-06 55.8 147 36.7
AUR62027510 Chenopodium quinoa HOM05D007990 ORTHO05D009984 5.1e-06 55.5 50 60.0
C09p48480 Brassica napus HOM05D007990 ORTHO05D009984 8.7e-06 54.7 70 44.3


User provided reference genes

Program Settings